RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CDC42BPGQ6DT37 1551 aa38.25■■■■□ 3.71
TSPAN4-217ENST00000527644 ADGRB1O14514 1584 aa38.23■■■■□ 3.71
TSPAN4-217ENST00000527644 DLC1Q96QB1 1528 aa38.19■■■■□ 3.7
TSPAN4-217ENST00000527644 PHF23Q9BUL5 403 aaPredicted RBP38.19■■■■□ 3.7
TSPAN4-217ENST00000527644 NHSL1Q5SYE7 1610 aa38.18■■■■□ 3.7
TSPAN4-217ENST00000527644 PRAM1Q96QH2 718 aa38.17■■■■□ 3.7
TSPAN4-217ENST00000527644 ORAI2Q96SN7 254 aa38.17■■■■□ 3.7
TSPAN4-217ENST00000527644 SIN3AQ96ST3 1273 aa38.14■■■■□ 3.7
TSPAN4-217ENST00000527644 POGKQ9P215 609 aa38.14■■■■□ 3.7
TSPAN4-217ENST00000527644 TRAK1Q9UPV9 953 aa38.14■■■■□ 3.7
TSPAN4-217ENST00000527644 DDX17Q92841 729 aaKnown RBP38.12■■■■□ 3.69
TSPAN4-217ENST00000527644 LRRC59Q96AG4 307 aaKnown RBP38.11■■■■□ 3.69
TSPAN4-217ENST00000527644 ESCO1Q5FWF5 840 aa38.1■■■■□ 3.69
TSPAN4-217ENST00000527644 SPATA31A6Q5VVP1 1343 aa38.1■■■■□ 3.69
TSPAN4-217ENST00000527644 SAFB2Q14151 953 aaKnown RBP eCLIP38.09■■■■□ 3.69
TSPAN4-217ENST00000527644 SHPRHQ149N8 1683 aa38.07■■■■□ 3.69
TSPAN4-217ENST00000527644 NEUROD1Q13562 356 aa38.07■■■■□ 3.68
TSPAN4-217ENST00000527644 L3MBTL2Q969R5 705 aa38.07■■■■□ 3.68
TSPAN4-217ENST00000527644 FMN2Q9NZ56 1722 aa38.05■■■■□ 3.68
TSPAN4-217ENST00000527644 KIAA1210Q9ULL0 1709 aa38.05■■■■□ 3.68
TSPAN4-217ENST00000527644 NUTM2FA1L443 756 aa38.05■■■■□ 3.68
TSPAN4-217ENST00000527644 SOS2Q07890 1332 aaPredicted RBP38.03■■■■□ 3.68
TSPAN4-217ENST00000527644 NPHP3Q7Z494 1330 aa37.99■■■■□ 3.67
TSPAN4-217ENST00000527644 RGS17Q9UGC6 210 aaPredicted RBP37.97■■■■□ 3.67
TSPAN4-217ENST00000527644 NBPF1Q3BBV0 1214 aa37.96■■■■□ 3.67
TSPAN4-217ENST00000527644 ADGRB2O60241 1585 aa37.96■■■■□ 3.67
TSPAN4-217ENST00000527644 FOXO3O43524 673 aa37.95■■■■□ 3.67
TSPAN4-217ENST00000527644 MINK1Q8N4C8 1332 aaPredicted RBP37.94■■■■□ 3.66
TSPAN4-217ENST00000527644 SOCS7O14512 581 aa37.94■■■■□ 3.66
TSPAN4-217ENST00000527644 LRP6O75581 1613 aa37.94■■■■□ 3.66
TSPAN4-217ENST00000527644 PNPLA6Q8IY17 1366 aa37.93■■■■□ 3.66
TSPAN4-217ENST00000527644 ARHGEF28Q8N1W1 1705 aaKnown RBP37.92■■■■□ 3.66
TSPAN4-217ENST00000527644 HIRIP3Q9BW71 556 aaPredicted RBP37.92■■■■□ 3.66
TSPAN4-217ENST00000527644 MEX3CQ5U5Q3 659 aaKnown RBP37.9■■■■□ 3.66
TSPAN4-217ENST00000527644 KIF1AQ12756 1690 aa37.89■■■■□ 3.66
TSPAN4-217ENST00000527644 ANKARQ7Z5J8 1434 aa37.89■■■■□ 3.66
TSPAN4-217ENST00000527644 NUTM2BA6NNL0 878 aaPredicted RBP37.89■■■■□ 3.66
TSPAN4-217ENST00000527644 NUTM2EB1AL46 878 aaPredicted RBP37.89■■■■□ 3.66
TSPAN4-217ENST00000527644 NUTM2AQ8IVF1 878 aaPredicted RBP37.89■■■■□ 3.66
TSPAN4-217ENST00000527644 PHF8Q9UPP1 1060 aa37.88■■■■□ 3.65
TSPAN4-217ENST00000527644 PXDNQ92626 1479 aa37.88■■■■□ 3.65
TSPAN4-217ENST00000527644 WASLO00401 505 aaPredicted RBP37.87■■■■□ 3.65
TSPAN4-217ENST00000527644 EIF3AQ14152 1382 aaKnown RBP37.87■■■■□ 3.65
TSPAN4-217ENST00000527644 RGPD8O14715 1765 aaPredicted RBP37.86■■■■□ 3.65
TSPAN4-217ENST00000527644 XPCQ01831 940 aaPredicted RBP37.84■■■■□ 3.65
TSPAN4-217ENST00000527644 USP32Q8NFA0 1604 aa37.8■■■■□ 3.64
TSPAN4-217ENST00000527644 TULP4Q9NRJ4 1543 aa37.79■■■■□ 3.64
TSPAN4-217ENST00000527644 KRT28Q7Z3Y7 464 aa37.79■■■■□ 3.64
TSPAN4-217ENST00000527644 POTEAQ6S8J7 498 aa37.78■■■■□ 3.64
TSPAN4-217ENST00000527644 TRPM1Q7Z4N2 1603 aa37.77■■■■□ 3.64
TSPAN4-217ENST00000527644 TONSLQ96HA7 1378 aa37.77■■■■□ 3.64
TSPAN4-217ENST00000527644 PSME1Q06323 249 aa37.76■■■■□ 3.64
TSPAN4-217ENST00000527644 PRR36Q9H6K5 1346 aa37.76■■■■□ 3.64
TSPAN4-217ENST00000527644 COL22A1Q8NFW1 1626 aaPredicted RBP37.74■■■■□ 3.63
TSPAN4-217ENST00000527644 PMFBP1Q8TBY8 1022 aa37.74■■■■□ 3.63
TSPAN4-217ENST00000527644 SPATA31A3Q5VYP0 1347 aa37.73■■■■□ 3.63
TSPAN4-217ENST00000527644 CENPJQ9HC77 1338 aaPredicted RBP37.73■■■■□ 3.63
TSPAN4-217ENST00000527644 ZNF772Q68DY9 489 aaPredicted RBP37.73■■■■□ 3.63
TSPAN4-217ENST00000527644 ROCK2O75116 1388 aaKnown RBP37.72■■■■□ 3.63
TSPAN4-217ENST00000527644 CDK19Q9BWU1 502 aa37.72■■■■□ 3.63
TSPAN4-217ENST00000527644 NBPF8Q3BBV2 869 aa37.71■■■■□ 3.63
TSPAN4-217ENST00000527644 NUDT16Q96DE0 195 aaKnown RBP37.69■■■■□ 3.62
TSPAN4-217ENST00000527644 ADAMTS2O95450 1211 aa37.67■■■■□ 3.62
TSPAN4-217ENST00000527644 C8orf37Q96NL8 207 aa37.67■■■■□ 3.62
TSPAN4-217ENST00000527644 PCGF6Q9BYE7 350 aa37.67■■■■□ 3.62
TSPAN4-217ENST00000527644 SBNO1A3KN83 1393 aa37.67■■■■□ 3.62
TSPAN4-217ENST00000527644 ATP7BP35670 1465 aa37.65■■■■□ 3.62
TSPAN4-217ENST00000527644 AFF2P51816 1311 aa37.65■■■■□ 3.62
TSPAN4-217ENST00000527644 TNS3Q68CZ2 1445 aa37.63■■■■□ 3.61
TSPAN4-217ENST00000527644 GPRASP1Q5JY77 1395 aa37.63■■■■□ 3.61
TSPAN4-217ENST00000527644 NGDNQ8NEJ9 315 aaKnown RBP37.62■■■■□ 3.61
TSPAN4-217ENST00000527644 NGLY1Q96IV0 654 aa37.61■■■■□ 3.61
TSPAN4-217ENST00000527644 ITSN1Q15811 1721 aa37.61■■■■□ 3.61
TSPAN4-217ENST00000527644 QRICH2Q9H0J4 1663 aa37.6■■■■□ 3.61
TSPAN4-217ENST00000527644 CCDC61Q9Y6R9 512 aa37.59■■■■□ 3.61
TSPAN4-217ENST00000527644 ARHGEF10O15013 1369 aa37.57■■■■□ 3.61
TSPAN4-217ENST00000527644 SRPK2P78362 688 aaKnown RBP37.56■■■■□ 3.6
TSPAN4-217ENST00000527644 LMOD2Q6P5Q4 547 aa37.55■■■■□ 3.6
TSPAN4-217ENST00000527644 RALGAPBQ86X10 1494 aa37.53■■■■□ 3.6
TSPAN4-217ENST00000527644 CARD11Q9BXL7 1154 aa37.53■■■■□ 3.6
TSPAN4-217ENST00000527644 PLEKHG3A1L390 1219 aa37.52■■■■□ 3.6
TSPAN4-217ENST00000527644 TOPAZ1Q8N9V7 1692 aa37.51■■■■□ 3.6
TSPAN4-217ENST00000527644 TRPM3Q9HCF6 1732 aaPredicted RBP37.51■■■■□ 3.6
TSPAN4-217ENST00000527644 FNBP4Q8N3X1 1017 aaPredicted RBP37.51■■■■□ 3.6
TSPAN4-217ENST00000527644 CABP2Q9NPB3 220 aa37.51■■■■□ 3.6
TSPAN4-217ENST00000527644 CLSPNQ9HAW4 1339 aa37.5■■■■□ 3.59
TSPAN4-217ENST00000527644 RXRBP28702 533 aa37.49■■■■□ 3.59
TSPAN4-217ENST00000527644 EVC2Q86UK5 1308 aa37.49■■■■□ 3.59
TSPAN4-217ENST00000527644 POLR3AO14802 1390 aaPredicted RBP37.48■■■■□ 3.59
TSPAN4-217ENST00000527644 QTRT2Q9H974 415 aaKnown RBP37.48■■■■□ 3.59
TSPAN4-217ENST00000527644 MARF1Q9Y4F3 1742 aaKnown RBP37.47■■■■□ 3.59
TSPAN4-217ENST00000527644 ACEP12821 1306 aa37.47■■■■□ 3.59
TSPAN4-217ENST00000527644 USP21Q9UK80 565 aa37.47■■■■□ 3.59
TSPAN4-217ENST00000527644 HAP1P54257 671 aaPredicted RBP37.46■■■■□ 3.59
TSPAN4-217ENST00000527644 PAK3O75914 559 aaPredicted RBP37.45■■■■□ 3.59
TSPAN4-217ENST00000527644 CABLES1Q8TDN4 633 aa37.45■■■■□ 3.59
TSPAN4-217ENST00000527644 PPIP5K1Q6PFW1 1433 aa37.44■■■■□ 3.58
TSPAN4-217ENST00000527644 ALS2Q96Q42 1657 aa37.44■■■■□ 3.58
TSPAN4-217ENST00000527644 PLEKHG5O94827 1062 aa37.41■■■■□ 3.58
TSPAN4-217ENST00000527644 TIMELESSQ9UNS1 1208 aa37.4■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms