RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
TRIM3-205ENST00000527237 BRINP3Q76B58 766 aa26.47■■□□□ 1.83
TRIM3-205ENST00000527237 WAPLQ7Z5K2 1190 aa26.47■■□□□ 1.83
TRIM3-205ENST00000527237 DLC1Q96QB1 1528 aa26.46■■□□□ 1.83
TRIM3-205ENST00000527237 C1orf167Q5SNV9 1468 aa26.46■■□□□ 1.83
TRIM3-205ENST00000527237 ADGRB2O60241 1585 aa26.41■■□□□ 1.82
TRIM3-205ENST00000527237 USP32Q8NFA0 1604 aa26.39■■□□□ 1.82
TRIM3-205ENST00000527237 SIN3AQ96ST3 1273 aa26.39■■□□□ 1.82
TRIM3-205ENST00000527237 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.81
TRIM3-205ENST00000527237 DDX17Q92841 729 aaKnown RBP26.38■■□□□ 1.81
TRIM3-205ENST00000527237 JCADQ9P266 1359 aa26.35■■□□□ 1.81
TRIM3-205ENST00000527237 KIF1AQ12756 1690 aa26.35■■□□□ 1.81
TRIM3-205ENST00000527237 ILDR2Q71H61 639 aa26.35■■□□□ 1.81
TRIM3-205ENST00000527237 LRP6O75581 1613 aa26.35■■□□□ 1.81
TRIM3-205ENST00000527237 SAFB2Q14151 953 aaKnown RBP eCLIP26.34■■□□□ 1.81
TRIM3-205ENST00000527237 ORAI2Q96SN7 254 aa26.34■■□□□ 1.81
TRIM3-205ENST00000527237 PRAM1Q96QH2 718 aa26.33■■□□□ 1.81
TRIM3-205ENST00000527237 STAC3Q96MF2 364 aa26.32■■□□□ 1.8
TRIM3-205ENST00000527237 TRAK1Q9UPV9 953 aa26.32■■□□□ 1.8
TRIM3-205ENST00000527237 NUTM2FA1L443 756 aa26.31■■□□□ 1.8
TRIM3-205ENST00000527237 SIRT1Q96EB6 747 aa26.3■■□□□ 1.8
TRIM3-205ENST00000527237 NEUROD1Q13562 356 aa26.29■■□□□ 1.8
TRIM3-205ENST00000527237 QRICH2Q9H0J4 1663 aa26.28■■□□□ 1.8
TRIM3-205ENST00000527237 L3MBTL2Q969R5 705 aa26.28■■□□□ 1.8
TRIM3-205ENST00000527237 ITSN1Q15811 1721 aa26.26■■□□□ 1.79
TRIM3-205ENST00000527237 PXDNQ92626 1479 aa26.26■■□□□ 1.79
TRIM3-205ENST00000527237 COL22A1Q8NFW1 1626 aaPredicted RBP26.25■■□□□ 1.79
TRIM3-205ENST00000527237 PHF23Q9BUL5 403 aaPredicted RBP26.25■■□□□ 1.79
TRIM3-205ENST00000527237 POGKQ9P215 609 aa26.25■■□□□ 1.79
TRIM3-205ENST00000527237 NBPF1Q3BBV0 1214 aa26.23■■□□□ 1.79
TRIM3-205ENST00000527237 ESCO1Q5FWF5 840 aa26.23■■□□□ 1.79
TRIM3-205ENST00000527237 MARF1Q9Y4F3 1742 aaKnown RBP26.22■■□□□ 1.79
TRIM3-205ENST00000527237 PNPLA6Q8IY17 1366 aa26.22■■□□□ 1.79
TRIM3-205ENST00000527237 TOPAZ1Q8N9V7 1692 aa26.22■■□□□ 1.79
TRIM3-205ENST00000527237 MINK1Q8N4C8 1332 aaPredicted RBP26.21■■□□□ 1.79
TRIM3-205ENST00000527237 TULP4Q9NRJ4 1543 aa26.21■■□□□ 1.79
TRIM3-205ENST00000527237 HIRIP3Q9BW71 556 aaPredicted RBP26.21■■□□□ 1.79
TRIM3-205ENST00000527237 SOS2Q07890 1332 aaPredicted RBP26.2■■□□□ 1.79
TRIM3-205ENST00000527237 SPATA31A6Q5VVP1 1343 aa26.19■■□□□ 1.78
TRIM3-205ENST00000527237 RGS17Q9UGC6 210 aaPredicted RBP26.19■■□□□ 1.78
TRIM3-205ENST00000527237 ABCA3Q99758 1704 aa26.18■■□□□ 1.78
TRIM3-205ENST00000527237 TRPM3Q9HCF6 1732 aaPredicted RBP26.18■■□□□ 1.78
TRIM3-205ENST00000527237 XPCQ01831 940 aaPredicted RBP26.17■■□□□ 1.78
TRIM3-205ENST00000527237 ANKARQ7Z5J8 1434 aa26.16■■□□□ 1.78
TRIM3-205ENST00000527237 LRRC59Q96AG4 307 aaKnown RBP26.15■■□□□ 1.78
TRIM3-205ENST00000527237 NPHP3Q7Z494 1330 aa26.14■■□□□ 1.78
TRIM3-205ENST00000527237 FOXO3O43524 673 aa26.14■■□□□ 1.78
TRIM3-205ENST00000527237 ATP7BP35670 1465 aa26.14■■□□□ 1.78
TRIM3-205ENST00000527237 PRR36Q9H6K5 1346 aa26.14■■□□□ 1.77
TRIM3-205ENST00000527237 NUTM2BA6NNL0 878 aaPredicted RBP26.13■■□□□ 1.77
TRIM3-205ENST00000527237 NUTM2EB1AL46 878 aaPredicted RBP26.13■■□□□ 1.77
TRIM3-205ENST00000527237 NUTM2AQ8IVF1 878 aaPredicted RBP26.13■■□□□ 1.77
TRIM3-205ENST00000527237 TONSLQ96HA7 1378 aa26.1■■□□□ 1.77
TRIM3-205ENST00000527237 ALS2Q96Q42 1657 aa26.1■■□□□ 1.77
TRIM3-205ENST00000527237 NBPF8Q3BBV2 869 aa26.1■■□□□ 1.77
TRIM3-205ENST00000527237 WASLO00401 505 aaPredicted RBP26.08■■□□□ 1.77
TRIM3-205ENST00000527237 PCGF6Q9BYE7 350 aa26.08■■□□□ 1.77
TRIM3-205ENST00000527237 PHF8Q9UPP1 1060 aa26.08■■□□□ 1.77
TRIM3-205ENST00000527237 ROCK2O75116 1388 aaKnown RBP26.07■■□□□ 1.76
TRIM3-205ENST00000527237 MEX3CQ5U5Q3 659 aaKnown RBP26.07■■□□□ 1.76
TRIM3-205ENST00000527237 CRYBG1Q9Y4K1 1723 aa26.07■■□□□ 1.76
TRIM3-205ENST00000527237 EIF3AQ14152 1382 aaKnown RBP26.07■■□□□ 1.76
TRIM3-205ENST00000527237 RALGAPBQ86X10 1494 aa26.06■■□□□ 1.76
TRIM3-205ENST00000527237 POTEAQ6S8J7 498 aa26.05■■□□□ 1.76
TRIM3-205ENST00000527237 PMFBP1Q8TBY8 1022 aa26.05■■□□□ 1.76
TRIM3-205ENST00000527237 TNS3Q68CZ2 1445 aa26.04■■□□□ 1.76
TRIM3-205ENST00000527237 CENPJQ9HC77 1338 aaPredicted RBP26.03■■□□□ 1.76
TRIM3-205ENST00000527237 GPRASP1Q5JY77 1395 aa26.01■■□□□ 1.75
TRIM3-205ENST00000527237 KRT28Q7Z3Y7 464 aa26.01■■□□□ 1.75
TRIM3-205ENST00000527237 SPATA31A3Q5VYP0 1347 aa26■■□□□ 1.75
TRIM3-205ENST00000527237 CDK19Q9BWU1 502 aa25.99■■□□□ 1.75
TRIM3-205ENST00000527237 PLCH1Q4KWH8 1693 aa25.99■■□□□ 1.75
TRIM3-205ENST00000527237 ADAMTS2O95450 1211 aa25.97■■□□□ 1.75
TRIM3-205ENST00000527237 PHRF1Q9P1Y6 1649 aaKnown RBP25.96■■□□□ 1.75
TRIM3-205ENST00000527237 AFF2P51816 1311 aa25.96■■□□□ 1.75
TRIM3-205ENST00000527237 SOCS7O14512 581 aa25.96■■□□□ 1.75
TRIM3-205ENST00000527237 NUDT16Q96DE0 195 aaKnown RBP25.96■■□□□ 1.75
TRIM3-205ENST00000527237 C8orf37Q96NL8 207 aa25.96■■□□□ 1.75
TRIM3-205ENST00000527237 SBNO1A3KN83 1393 aa25.95■■□□□ 1.75
TRIM3-205ENST00000527237 AKAP12Q02952 1782 aa25.95■■□□□ 1.75
TRIM3-205ENST00000527237 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.95■■□□□ 1.74
TRIM3-205ENST00000527237 PSME1Q06323 249 aa25.92■■□□□ 1.74
TRIM3-205ENST00000527237 PLEKHG5O94827 1062 aa25.9■■□□□ 1.74
TRIM3-205ENST00000527237 CABP2Q9NPB3 220 aa25.9■■□□□ 1.74
TRIM3-205ENST00000527237 PPIP5K1Q6PFW1 1433 aa25.89■■□□□ 1.74
TRIM3-205ENST00000527237 NWD2Q9ULI1 1742 aa25.88■■□□□ 1.73
TRIM3-205ENST00000527237 POLR3AO14802 1390 aaPredicted RBP25.88■■□□□ 1.73
TRIM3-205ENST00000527237 SRPK2P78362 688 aaKnown RBP25.88■■□□□ 1.73
TRIM3-205ENST00000527237 ZNF772Q68DY9 489 aaPredicted RBP25.88■■□□□ 1.73
TRIM3-205ENST00000527237 NGDNQ8NEJ9 315 aaKnown RBP25.88■■□□□ 1.73
TRIM3-205ENST00000527237 CARD11Q9BXL7 1154 aa25.88■■□□□ 1.73
TRIM3-205ENST00000527237 ARHGEF10O15013 1369 aa25.87■■□□□ 1.73
TRIM3-205ENST00000527237 LMOD2Q6P5Q4 547 aa25.87■■□□□ 1.73
TRIM3-205ENST00000527237 CABLES1Q8TDN4 633 aa25.87■■□□□ 1.73
TRIM3-205ENST00000527237 NRAPQ86VF7 1730 aa25.87■■□□□ 1.73
TRIM3-205ENST00000527237 MON2Q7Z3U7 1717 aa25.85■■□□□ 1.73
TRIM3-205ENST00000527237 NGLY1Q96IV0 654 aa25.85■■□□□ 1.73
TRIM3-205ENST00000527237 CCDC61Q9Y6R9 512 aa25.85■■□□□ 1.73
TRIM3-205ENST00000527237 NRKQ7Z2Y5 1582 aa25.85■■□□□ 1.73
TRIM3-205ENST00000527237 ACEP12821 1306 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms