RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 FMN2Q9NZ56 1722 aa23.55■■□□□ 1.36
CTSB-213ENST00000527215 PLEKHH1Q9ULM0 1364 aa23.54■■□□□ 1.36
CTSB-213ENST00000527215 POTEAQ6S8J7 498 aa23.54■■□□□ 1.36
CTSB-213ENST00000527215 DCAF11Q8TEB1 546 aa23.54■■□□□ 1.36
CTSB-213ENST00000527215 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
CTSB-213ENST00000527215 KDM2AQ9Y2K7 1162 aa23.53■■□□□ 1.36
CTSB-213ENST00000527215 ADGRB1O14514 1584 aa23.52■■□□□ 1.36
CTSB-213ENST00000527215 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
CTSB-213ENST00000527215 RGPD8O14715 1765 aaPredicted RBP23.52■■□□□ 1.36
CTSB-213ENST00000527215 DDX17Q92841 729 aaKnown RBP23.51■■□□□ 1.35
CTSB-213ENST00000527215 LRP6O75581 1613 aa23.5■■□□□ 1.35
CTSB-213ENST00000527215 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
CTSB-213ENST00000527215 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
CTSB-213ENST00000527215 SIRT1Q96EB6 747 aa23.48■■□□□ 1.35
CTSB-213ENST00000527215 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
CTSB-213ENST00000527215 KIAA1210Q9ULL0 1709 aa23.45■■□□□ 1.34
CTSB-213ENST00000527215 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
CTSB-213ENST00000527215 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
CTSB-213ENST00000527215 LRRC59Q96AG4 307 aaKnown RBP23.44■■□□□ 1.34
CTSB-213ENST00000527215 PRAM1Q96QH2 718 aa23.43■■□□□ 1.34
CTSB-213ENST00000527215 KIF1AQ12756 1690 aa23.43■■□□□ 1.34
CTSB-213ENST00000527215 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
CTSB-213ENST00000527215 ESCO1Q5FWF5 840 aa23.42■■□□□ 1.34
CTSB-213ENST00000527215 ADGRB2O60241 1585 aa23.41■■□□□ 1.34
CTSB-213ENST00000527215 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
CTSB-213ENST00000527215 SOS2Q07890 1332 aaPredicted RBP23.4■■□□□ 1.34
CTSB-213ENST00000527215 SAFB2Q14151 953 aaKnown RBP eCLIP23.4■■□□□ 1.34
CTSB-213ENST00000527215 TRAK1Q9UPV9 953 aa23.39■■□□□ 1.33
CTSB-213ENST00000527215 USP32Q8NFA0 1604 aa23.38■■□□□ 1.33
CTSB-213ENST00000527215 NUTM2BA6NNL0 878 aaPredicted RBP23.38■■□□□ 1.33
CTSB-213ENST00000527215 NUTM2EB1AL46 878 aaPredicted RBP23.38■■□□□ 1.33
CTSB-213ENST00000527215 NUTM2AQ8IVF1 878 aaPredicted RBP23.38■■□□□ 1.33
CTSB-213ENST00000527215 POGKQ9P215 609 aa23.38■■□□□ 1.33
CTSB-213ENST00000527215 COL22A1Q8NFW1 1626 aaPredicted RBP23.37■■□□□ 1.33
CTSB-213ENST00000527215 PXDNQ92626 1479 aa23.37■■□□□ 1.33
CTSB-213ENST00000527215 NPHP3Q7Z494 1330 aa23.36■■□□□ 1.33
CTSB-213ENST00000527215 FOXO3O43524 673 aa23.33■■□□□ 1.33
CTSB-213ENST00000527215 MARF1Q9Y4F3 1742 aaKnown RBP23.33■■□□□ 1.32
CTSB-213ENST00000527215 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
CTSB-213ENST00000527215 XPCQ01831 940 aaPredicted RBP23.31■■□□□ 1.32
CTSB-213ENST00000527215 HIRIP3Q9BW71 556 aaPredicted RBP23.3■■□□□ 1.32
CTSB-213ENST00000527215 MINK1Q8N4C8 1332 aaPredicted RBP23.3■■□□□ 1.32
CTSB-213ENST00000527215 RXRBP28702 533 aa23.29■■□□□ 1.32
CTSB-213ENST00000527215 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
CTSB-213ENST00000527215 ANKARQ7Z5J8 1434 aa23.29■■□□□ 1.32
CTSB-213ENST00000527215 AFF2P51816 1311 aa23.29■■□□□ 1.32
CTSB-213ENST00000527215 ITSN1Q15811 1721 aa23.28■■□□□ 1.32
CTSB-213ENST00000527215 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
CTSB-213ENST00000527215 TULP4Q9NRJ4 1543 aa23.28■■□□□ 1.32
CTSB-213ENST00000527215 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
CTSB-213ENST00000527215 PHF8Q9UPP1 1060 aa23.27■■□□□ 1.32
CTSB-213ENST00000527215 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
CTSB-213ENST00000527215 L3MBTL2Q969R5 705 aa23.26■■□□□ 1.31
CTSB-213ENST00000527215 NBPF1Q3BBV0 1214 aa23.25■■□□□ 1.31
CTSB-213ENST00000527215 C8orf37Q96NL8 207 aa23.24■■□□□ 1.31
CTSB-213ENST00000527215 EIF3AQ14152 1382 aaKnown RBP23.24■■□□□ 1.31
CTSB-213ENST00000527215 ADAMTS2O95450 1211 aa23.23■■□□□ 1.31
CTSB-213ENST00000527215 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
CTSB-213ENST00000527215 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
CTSB-213ENST00000527215 WASLO00401 505 aaPredicted RBP23.22■■□□□ 1.31
CTSB-213ENST00000527215 KRT28Q7Z3Y7 464 aa23.22■■□□□ 1.31
CTSB-213ENST00000527215 PRR36Q9H6K5 1346 aa23.21■■□□□ 1.31
CTSB-213ENST00000527215 ABCA3Q99758 1704 aa23.21■■□□□ 1.31
CTSB-213ENST00000527215 SPATA31A3Q5VYP0 1347 aa23.2■■□□□ 1.3
CTSB-213ENST00000527215 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
CTSB-213ENST00000527215 TOPAZ1Q8N9V7 1692 aa23.19■■□□□ 1.3
CTSB-213ENST00000527215 TNS3Q68CZ2 1445 aa23.19■■□□□ 1.3
CTSB-213ENST00000527215 NGLY1Q96IV0 654 aa23.18■■□□□ 1.3
CTSB-213ENST00000527215 ATP7BP35670 1465 aa23.17■■□□□ 1.3
CTSB-213ENST00000527215 ALS2Q96Q42 1657 aa23.17■■□□□ 1.3
CTSB-213ENST00000527215 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
CTSB-213ENST00000527215 PSME1Q06323 249 aa23.17■■□□□ 1.3
CTSB-213ENST00000527215 SBNO1A3KN83 1393 aa23.15■■□□□ 1.3
CTSB-213ENST00000527215 UPF1Q92900 1129 aaKnown RBP eCLIP23.15■■□□□ 1.3
CTSB-213ENST00000527215 QTRT2Q9H974 415 aaKnown RBP23.15■■□□□ 1.3
CTSB-213ENST00000527215 RGS12O14924 1447 aa23.13■■□□□ 1.29
CTSB-213ENST00000527215 CDK19Q9BWU1 502 aa23.12■■□□□ 1.29
CTSB-213ENST00000527215 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
CTSB-213ENST00000527215 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.11■■□□□ 1.29
CTSB-213ENST00000527215 NUDT16Q96DE0 195 aaKnown RBP23.11■■□□□ 1.29
CTSB-213ENST00000527215 CRYBG1Q9Y4K1 1723 aa23.11■■□□□ 1.29
CTSB-213ENST00000527215 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
CTSB-213ENST00000527215 ARHGEF10O15013 1369 aa23.1■■□□□ 1.29
CTSB-213ENST00000527215 GPRASP1Q5JY77 1395 aa23.1■■□□□ 1.29
CTSB-213ENST00000527215 PLCH1Q4KWH8 1693 aa23.09■■□□□ 1.29
CTSB-213ENST00000527215 USP21Q9UK80 565 aa23.09■■□□□ 1.29
CTSB-213ENST00000527215 ROCK2O75116 1388 aaKnown RBP23.09■■□□□ 1.29
CTSB-213ENST00000527215 FNBP4Q8N3X1 1017 aaPredicted RBP23.08■■□□□ 1.29
CTSB-213ENST00000527215 NGDNQ8NEJ9 315 aaKnown RBP23.08■■□□□ 1.29
CTSB-213ENST00000527215 TRPC5Q9UL62 973 aaPredicted RBP23.08■■□□□ 1.29
CTSB-213ENST00000527215 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
CTSB-213ENST00000527215 PLEKHG5O94827 1062 aa23.07■■□□□ 1.28
CTSB-213ENST00000527215 NBPF8Q3BBV2 869 aa23.07■■□□□ 1.28
CTSB-213ENST00000527215 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
CTSB-213ENST00000527215 BCL9LQ86UU0 1499 aa23.05■■□□□ 1.28
CTSB-213ENST00000527215 NWD2Q9ULI1 1742 aa23.05■■□□□ 1.28
CTSB-213ENST00000527215 HAP1P54257 671 aaPredicted RBP23.05■■□□□ 1.28
CTSB-213ENST00000527215 ATRNO75882 1429 aa23.05■■□□□ 1.28
CTSB-213ENST00000527215 CCDC61Q9Y6R9 512 aa23.03■■□□□ 1.28
CTSB-213ENST00000527215 SLIT2O94813 1529 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms