RNA–Protein interactions for RNA: ENST00000527026.1

PTPRJ-204, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 4

Gene PTPRJ, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-204ENST00000527026 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
PTPRJ-204ENST00000527026 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
PTPRJ-204ENST00000527026 DEPDC5O75140 1603 aa13.36□□□□□ -0.27
PTPRJ-204ENST00000527026 NUP155O75694 1391 aa13.36□□□□□ -0.27
PTPRJ-204ENST00000527026 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
PTPRJ-204ENST00000527026 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
PTPRJ-204ENST00000527026 PRDM15P57071 1507 aaPredicted RBP13.35□□□□□ -0.27
PTPRJ-204ENST00000527026 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
PTPRJ-204ENST00000527026 TRIM52Q96A61 297 aa13.35□□□□□ -0.27
PTPRJ-204ENST00000527026 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
PTPRJ-204ENST00000527026 SPATA31D1Q6ZQQ2 1576 aa13.34□□□□□ -0.27
PTPRJ-204ENST00000527026 UGGT1Q9NYU2 1555 aa13.34□□□□□ -0.27
PTPRJ-204ENST00000527026 LTKP29376 864 aa13.34□□□□□ -0.27
PTPRJ-204ENST00000527026 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
PTPRJ-204ENST00000527026 SLC52A1Q9NWF4 448 aa13.34□□□□□ -0.27
PTPRJ-204ENST00000527026 VWDEQ8N2E2 1590 aa13.33□□□□□ -0.28
PTPRJ-204ENST00000527026 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
PTPRJ-204ENST00000527026 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
PTPRJ-204ENST00000527026 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
PTPRJ-204ENST00000527026 EID1Q9Y6B2 187 aa13.32□□□□□ -0.28
PTPRJ-204ENST00000527026 LMTK2Q8IWU2 1503 aa13.32□□□□□ -0.28
PTPRJ-204ENST00000527026 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
PTPRJ-204ENST00000527026 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
PTPRJ-204ENST00000527026 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
PTPRJ-204ENST00000527026 NOS1P29475 1434 aa13.29□□□□□ -0.28
PTPRJ-204ENST00000527026 NAIPQ13075 1403 aa13.29□□□□□ -0.28
PTPRJ-204ENST00000527026 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
PTPRJ-204ENST00000527026 SNPHO15079 494 aa13.28□□□□□ -0.28
PTPRJ-204ENST00000527026 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
PTPRJ-204ENST00000527026 BCANQ96GW7 911 aa13.28□□□□□ -0.28
PTPRJ-204ENST00000527026 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
PTPRJ-204ENST00000527026 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.29
PTPRJ-204ENST00000527026 SPNS2Q8IVW8 549 aa13.27□□□□□ -0.29
PTPRJ-204ENST00000527026 NPHP4O75161 1426 aaPredicted RBP13.27□□□□□ -0.29
PTPRJ-204ENST00000527026 PIK3C2BO00750 1634 aa13.27□□□□□ -0.29
PTPRJ-204ENST00000527026 TET3O43151 1660 aa13.27□□□□□ -0.29
PTPRJ-204ENST00000527026 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
PTPRJ-204ENST00000527026 MYO5BQ9ULV0 1848 aa13.27□□□□□ -0.29
PTPRJ-204ENST00000527026 UNC13BO14795 1591 aa13.26□□□□□ -0.29
PTPRJ-204ENST00000527026 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
PTPRJ-204ENST00000527026 EFCAB6Q5THR3 1501 aa13.26□□□□□ -0.29
PTPRJ-204ENST00000527026 NUTM2DQ5VT03 806 aaPredicted RBP13.26□□□□□ -0.29
PTPRJ-204ENST00000527026 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
PTPRJ-204ENST00000527026 E9PCH4 1651 aa13.25□□□□□ -0.29
PTPRJ-204ENST00000527026 GCC2Q8IWJ2 1684 aa13.25□□□□□ -0.29
PTPRJ-204ENST00000527026 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
PTPRJ-204ENST00000527026 SYNMO15061 1565 aa13.25□□□□□ -0.29
PTPRJ-204ENST00000527026 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
PTPRJ-204ENST00000527026 GTPBP6O43824 516 aaPredicted RBP13.25□□□□□ -0.29
PTPRJ-204ENST00000527026 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
PTPRJ-204ENST00000527026 RPRD2Q5VT52 1461 aaKnown RBP13.24□□□□□ -0.29
PTPRJ-204ENST00000527026 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
PTPRJ-204ENST00000527026 SLC26A8Q96RN1 970 aa13.24□□□□□ -0.29
PTPRJ-204ENST00000527026 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
PTPRJ-204ENST00000527026 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
PTPRJ-204ENST00000527026 MED14O60244 1454 aa13.23□□□□□ -0.29
PTPRJ-204ENST00000527026 SOX12O15370 315 aa13.23□□□□□ -0.29
PTPRJ-204ENST00000527026 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
PTPRJ-204ENST00000527026 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
PTPRJ-204ENST00000527026 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
PTPRJ-204ENST00000527026 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
PTPRJ-204ENST00000527026 PPP1R15AO75807 674 aaPredicted RBP13.21□□□□□ -0.29
PTPRJ-204ENST00000527026 ZNF326Q5BKZ1 582 aaKnown RBP13.21□□□□□ -0.29
PTPRJ-204ENST00000527026 SCAF11Q99590 1463 aaKnown RBP13.21□□□□□ -0.3
PTPRJ-204ENST00000527026 ARHGAP23Q9P227 1491 aa13.21□□□□□ -0.3
PTPRJ-204ENST00000527026 SLIT1O75093 1534 aa13.2□□□□□ -0.3
PTPRJ-204ENST00000527026 MKRN3Q13064 507 aaKnown RBP13.2□□□□□ -0.3
PTPRJ-204ENST00000527026 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTPRJ-204ENST00000527026 MPHOSPH9Q99550 1183 aa13.2□□□□□ -0.3
PTPRJ-204ENST00000527026 IQGAP1P46940 1657 aa13.2□□□□□ -0.3
PTPRJ-204ENST00000527026 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
PTPRJ-204ENST00000527026 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
PTPRJ-204ENST00000527026 RIMS2Q9UQ26 1411 aa13.18□□□□□ -0.3
PTPRJ-204ENST00000527026 SETD5Q9C0A6 1442 aa13.17□□□□□ -0.3
PTPRJ-204ENST00000527026 KCNA6P17658 529 aa13.17□□□□□ -0.3
PTPRJ-204ENST00000527026 KDM5AP29375 1690 aaKnown RBP13.17□□□□□ -0.3
PTPRJ-204ENST00000527026 STRCP1A6NGW2 1772 aa13.17□□□□□ -0.3
PTPRJ-204ENST00000527026 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
PTPRJ-204ENST00000527026 TOM1O60784 492 aa13.16□□□□□ -0.3
PTPRJ-204ENST00000527026 NLRP6P59044 892 aa13.16□□□□□ -0.3
PTPRJ-204ENST00000527026 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
PTPRJ-204ENST00000527026 PROSER2Q86WR7 435 aaPredicted RBP13.16□□□□□ -0.3
PTPRJ-204ENST00000527026 RBM33Q96EV2 1170 aaKnown RBP13.16□□□□□ -0.3
PTPRJ-204ENST00000527026 RYDENQ9NUL5 291 aaKnown RBP13.16□□□□□ -0.3
PTPRJ-204ENST00000527026 ADGRB3O60242 1522 aa13.15□□□□□ -0.3
PTPRJ-204ENST00000527026 TBX22Q9Y458 520 aa13.15□□□□□ -0.3
PTPRJ-204ENST00000527026 SPHKAPQ2M3C7 1700 aa13.14□□□□□ -0.31
PTPRJ-204ENST00000527026 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
PTPRJ-204ENST00000527026 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
PTPRJ-204ENST00000527026 KIF1BO60333 1816 aa13.13□□□□□ -0.31
PTPRJ-204ENST00000527026 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
PTPRJ-204ENST00000527026 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
PTPRJ-204ENST00000527026 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
PTPRJ-204ENST00000527026 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
PTPRJ-204ENST00000527026 CPS1P31327 1500 aa13.12□□□□□ -0.31
PTPRJ-204ENST00000527026 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
PTPRJ-204ENST00000527026 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
PTPRJ-204ENST00000527026 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
PTPRJ-204ENST00000527026 EMP3P54852 163 aa13.11□□□□□ -0.31
PTPRJ-204ENST00000527026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms