RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 CCDC144AA2RUR9 1427 aa27.73■■■□□ 2.03
CDC27-203ENST00000526866 RGL3Q3MIN7 710 aa27.72■■■□□ 2.03
CDC27-203ENST00000526866 IFT172Q9UG01 1749 aa27.72■■■□□ 2.03
CDC27-203ENST00000526866 COL22A1Q8NFW1 1626 aaPredicted RBP27.72■■■□□ 2.03
CDC27-203ENST00000526866 SPATA31E1Q6ZUB1 1445 aa27.71■■■□□ 2.03
CDC27-203ENST00000526866 ESCO1Q5FWF5 840 aa27.7■■■□□ 2.03
CDC27-203ENST00000526866 STK26Q9P289 416 aa27.68■■■□□ 2.02
CDC27-203ENST00000526866 USP21Q9UK80 565 aa27.68■■■□□ 2.02
CDC27-203ENST00000526866 MPHOSPH9Q99550 1183 aa27.67■■■□□ 2.02
CDC27-203ENST00000526866 NPHP3Q7Z494 1330 aa27.67■■■□□ 2.02
CDC27-203ENST00000526866 TECPR2O15040 1411 aa27.67■■■□□ 2.02
CDC27-203ENST00000526866 WAPLQ7Z5K2 1190 aa27.67■■■□□ 2.02
CDC27-203ENST00000526866 PXDNQ92626 1479 aa27.67■■■□□ 2.02
CDC27-203ENST00000526866 LRPPRCP42704 1394 aaKnown RBP27.66■■■□□ 2.02
CDC27-203ENST00000526866 ANKRD30BQ9BXX2 1392 aa27.66■■■□□ 2.02
CDC27-203ENST00000526866 MYOM2P54296 1465 aa27.65■■■□□ 2.02
CDC27-203ENST00000526866 FNBP4Q8N3X1 1017 aaPredicted RBP27.65■■■□□ 2.02
CDC27-203ENST00000526866 KNDC1Q76NI1 1749 aa27.64■■■□□ 2.02
CDC27-203ENST00000526866 TMEM132EQ6IEE7 984 aa27.64■■■□□ 2.02
CDC27-203ENST00000526866 NUTM2FA1L443 756 aa27.63■■■□□ 2.01
CDC27-203ENST00000526866 FOXO3O43524 673 aa27.63■■■□□ 2.01
CDC27-203ENST00000526866 XPCQ01831 940 aaPredicted RBP27.63■■■□□ 2.01
CDC27-203ENST00000526866 TRPC5Q9UL62 973 aaPredicted RBP27.63■■■□□ 2.01
CDC27-203ENST00000526866 ABCC11Q96J66 1382 aa27.63■■■□□ 2.01
CDC27-203ENST00000526866 PLEKHH1Q9ULM0 1364 aa27.63■■■□□ 2.01
CDC27-203ENST00000526866 PIK3C2GO75747 1445 aa27.62■■■□□ 2.01
CDC27-203ENST00000526866 MARF1Q9Y4F3 1742 aaKnown RBP27.6■■■□□ 2.01
CDC27-203ENST00000526866 ATRNO75882 1429 aa27.6■■■□□ 2.01
CDC27-203ENST00000526866 FMN2Q9NZ56 1722 aa27.58■■■□□ 2.01
CDC27-203ENST00000526866 YTHDC2Q9H6S0 1430 aaKnown RBP27.57■■■□□ 2
CDC27-203ENST00000526866 ATAD2Q6PL18 1390 aa27.56■■■□□ 2
CDC27-203ENST00000526866 BCL9LQ86UU0 1499 aa27.56■■■□□ 2
CDC27-203ENST00000526866 KIF1AQ12756 1690 aa27.52■■■□□ 2
CDC27-203ENST00000526866 C14orf93Q9H972 538 aaKnown RBP27.5■■□□□ 1.99
CDC27-203ENST00000526866 RGPD8O14715 1765 aaPredicted RBP27.49■■□□□ 1.99
CDC27-203ENST00000526866 SPATA31A3Q5VYP0 1347 aa27.49■■□□□ 1.99
CDC27-203ENST00000526866 SIRT1Q96EB6 747 aa27.49■■□□□ 1.99
CDC27-203ENST00000526866 NRXN1Q9ULB1 1477 aa27.48■■□□□ 1.99
CDC27-203ENST00000526866 CFAP70Q5T0N1 1121 aa27.47■■□□□ 1.99
CDC27-203ENST00000526866 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.46■■□□□ 1.99
CDC27-203ENST00000526866 KRT28Q7Z3Y7 464 aa27.46■■□□□ 1.99
CDC27-203ENST00000526866 GJD4Q96KN9 370 aaPredicted RBP27.45■■□□□ 1.98
CDC27-203ENST00000526866 DHX57Q6P158 1386 aaKnown RBP27.45■■□□□ 1.98
CDC27-203ENST00000526866 SLIT2O94813 1529 aa27.43■■□□□ 1.98
CDC27-203ENST00000526866 PHF8Q9UPP1 1060 aa27.42■■□□□ 1.98
CDC27-203ENST00000526866 ACIN1Q9UKV3 1341 aaKnown RBP27.42■■□□□ 1.98
CDC27-203ENST00000526866 USP32Q8NFA0 1604 aa27.42■■□□□ 1.98
CDC27-203ENST00000526866 EP400Q96L91 3159 aa27.41■■□□□ 1.98
CDC27-203ENST00000526866 SAFB2Q14151 953 aaKnown RBP eCLIP27.41■■□□□ 1.98
CDC27-203ENST00000526866 UNC5CLQ8IV45 518 aa27.41■■□□□ 1.98
CDC27-203ENST00000526866 GLI3P10071 1580 aa27.4■■□□□ 1.98
CDC27-203ENST00000526866 PRAM1Q96QH2 718 aa27.4■■□□□ 1.98
CDC27-203ENST00000526866 TNS3Q68CZ2 1445 aa27.4■■□□□ 1.98
CDC27-203ENST00000526866 RALGAPBQ86X10 1494 aa27.39■■□□□ 1.97
CDC27-203ENST00000526866 PSME1Q06323 249 aa27.37■■□□□ 1.97
CDC27-203ENST00000526866 CABLES1Q8TDN4 633 aa27.36■■□□□ 1.97
CDC27-203ENST00000526866 DLC1Q96QB1 1528 aa27.36■■□□□ 1.97
CDC27-203ENST00000526866 RAB3GAP2Q9H2M9 1393 aa27.35■■□□□ 1.97
CDC27-203ENST00000526866 PLEKHG5O94827 1062 aa27.34■■□□□ 1.97
CDC27-203ENST00000526866 HAP1P54257 671 aaPredicted RBP27.34■■□□□ 1.97
CDC27-203ENST00000526866 ABCA3Q99758 1704 aa27.34■■□□□ 1.97
CDC27-203ENST00000526866 SBNO1A3KN83 1393 aa27.34■■□□□ 1.97
CDC27-203ENST00000526866 CCDC125Q86Z20 511 aa27.33■■□□□ 1.97
CDC27-203ENST00000526866 POGKQ9P215 609 aa27.33■■□□□ 1.97
CDC27-203ENST00000526866 PLCH1Q4KWH8 1693 aa27.32■■□□□ 1.96
CDC27-203ENST00000526866 BRWD3Q6RI45 1802 aa27.32■■□□□ 1.96
CDC27-203ENST00000526866 ADGRB1O14514 1584 aa27.31■■□□□ 1.96
CDC27-203ENST00000526866 ADGRB2O60241 1585 aa27.31■■□□□ 1.96
CDC27-203ENST00000526866 LMOD2Q6P5Q4 547 aa27.31■■□□□ 1.96
CDC27-203ENST00000526866 PMFBP1Q8TBY8 1022 aa27.31■■□□□ 1.96
CDC27-203ENST00000526866 ANKARQ7Z5J8 1434 aa27.3■■□□□ 1.96
CDC27-203ENST00000526866 ZRANB1Q9UGI0 708 aa27.3■■□□□ 1.96
CDC27-203ENST00000526866 NWD2Q9ULI1 1742 aa27.29■■□□□ 1.96
CDC27-203ENST00000526866 ARHGEF10O15013 1369 aa27.29■■□□□ 1.96
CDC27-203ENST00000526866 SRCAPQ6ZRS2 3230 aa27.27■■□□□ 1.96
CDC27-203ENST00000526866 VPS72Q15906 364 aa27.27■■□□□ 1.96
CDC27-203ENST00000526866 TRAK1Q9UPV9 953 aa27.27■■□□□ 1.96
CDC27-203ENST00000526866 HIRIP3Q9BW71 556 aaPredicted RBP27.26■■□□□ 1.95
CDC27-203ENST00000526866 TRPM3Q9HCF6 1732 aaPredicted RBP27.25■■□□□ 1.95
CDC27-203ENST00000526866 SEPT12Q8IYM1 358 aa27.24■■□□□ 1.95
CDC27-203ENST00000526866 BLMP54132 1417 aaPredicted RBP27.24■■□□□ 1.95
CDC27-203ENST00000526866 KDM2AQ9Y2K7 1162 aa27.24■■□□□ 1.95
CDC27-203ENST00000526866 MINK1Q8N4C8 1332 aaPredicted RBP27.23■■□□□ 1.95
CDC27-203ENST00000526866 CCDC9Q9Y3X0 531 aaKnown RBP27.23■■□□□ 1.95
CDC27-203ENST00000526866 FAM83GA6ND36 823 aa27.22■■□□□ 1.95
CDC27-203ENST00000526866 PRR36Q9H6K5 1346 aa27.22■■□□□ 1.95
CDC27-203ENST00000526866 DCAF11Q8TEB1 546 aa27.21■■□□□ 1.95
CDC27-203ENST00000526866 ALS2Q96Q42 1657 aa27.21■■□□□ 1.95
CDC27-203ENST00000526866 TULP4Q9NRJ4 1543 aa27.2■■□□□ 1.94
CDC27-203ENST00000526866 NRAPQ86VF7 1730 aa27.19■■□□□ 1.94
CDC27-203ENST00000526866 ONECUT3O60422 494 aaPredicted RBP27.19■■□□□ 1.94
CDC27-203ENST00000526866 EIF3AQ14152 1382 aaKnown RBP27.18■■□□□ 1.94
CDC27-203ENST00000526866 DEFB132Q7Z7B7 95 aa27.17■■□□□ 1.94
CDC27-203ENST00000526866 GPRASP1Q5JY77 1395 aa27.17■■□□□ 1.94
CDC27-203ENST00000526866 WASLO00401 505 aaPredicted RBP27.16■■□□□ 1.94
CDC27-203ENST00000526866 KRT27Q7Z3Y8 459 aa27.15■■□□□ 1.94
CDC27-203ENST00000526866 BTG4Q9NY30 223 aa27.14■■□□□ 1.93
CDC27-203ENST00000526866 COL14A1Q05707 1796 aaKnown RBP27.13■■□□□ 1.93
CDC27-203ENST00000526866 SF3B2Q13435 895 aaKnown RBP27.13■■□□□ 1.93
CDC27-203ENST00000526866 ARHGEF28Q8N1W1 1705 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms