RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
SNRNP35-203ENST00000526639 SIN3AQ96ST3 1273 aa16.15■□□□□ 0.18
SNRNP35-203ENST00000526639 C1orf167Q5SNV9 1468 aa16.15■□□□□ 0.18
SNRNP35-203ENST00000526639 LAMC1P11047 1609 aa16.14■□□□□ 0.17
SNRNP35-203ENST00000526639 COL16A1Q07092 1604 aaPredicted RBP16.14■□□□□ 0.17
SNRNP35-203ENST00000526639 TRAK1Q9UPV9 953 aa16.14■□□□□ 0.17
SNRNP35-203ENST00000526639 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
SNRNP35-203ENST00000526639 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
SNRNP35-203ENST00000526639 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
SNRNP35-203ENST00000526639 KNDC1Q76NI1 1749 aa16.13■□□□□ 0.17
SNRNP35-203ENST00000526639 JCADQ9P266 1359 aa16.13■□□□□ 0.17
SNRNP35-203ENST00000526639 AHDC1Q5TGY3 1603 aaPredicted RBP16.12■□□□□ 0.17
SNRNP35-203ENST00000526639 ESCO1Q5FWF5 840 aa16.11■□□□□ 0.17
SNRNP35-203ENST00000526639 ADGRB1O14514 1584 aa16.11■□□□□ 0.17
SNRNP35-203ENST00000526639 POGKQ9P215 609 aa16.11■□□□□ 0.17
SNRNP35-203ENST00000526639 SIRT1Q96EB6 747 aa16.1■□□□□ 0.17
SNRNP35-203ENST00000526639 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
SNRNP35-203ENST00000526639 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
SNRNP35-203ENST00000526639 HIRIP3Q9BW71 556 aaPredicted RBP16.08■□□□□ 0.16
SNRNP35-203ENST00000526639 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.16
SNRNP35-203ENST00000526639 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
SNRNP35-203ENST00000526639 RGS17Q9UGC6 210 aaPredicted RBP16.07■□□□□ 0.16
SNRNP35-203ENST00000526639 NBPF1Q3BBV0 1214 aa16.07■□□□□ 0.16
SNRNP35-203ENST00000526639 NUTM2BA6NNL0 878 aaPredicted RBP16.06■□□□□ 0.16
SNRNP35-203ENST00000526639 NUTM2EB1AL46 878 aaPredicted RBP16.06■□□□□ 0.16
SNRNP35-203ENST00000526639 FOXO3O43524 673 aa16.06■□□□□ 0.16
SNRNP35-203ENST00000526639 NUTM2AQ8IVF1 878 aaPredicted RBP16.06■□□□□ 0.16
SNRNP35-203ENST00000526639 XPCQ01831 940 aaPredicted RBP16.06■□□□□ 0.16
SNRNP35-203ENST00000526639 MINK1Q8N4C8 1332 aaPredicted RBP16.05■□□□□ 0.16
SNRNP35-203ENST00000526639 DLC1Q96QB1 1528 aa16.05■□□□□ 0.16
SNRNP35-203ENST00000526639 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
SNRNP35-203ENST00000526639 LRP6O75581 1613 aa16.04■□□□□ 0.16
SNRNP35-203ENST00000526639 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
SNRNP35-203ENST00000526639 MEX3CQ5U5Q3 659 aaKnown RBP16.03■□□□□ 0.16
SNRNP35-203ENST00000526639 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
SNRNP35-203ENST00000526639 SHPRHQ149N8 1683 aa16.02■□□□□ 0.16
SNRNP35-203ENST00000526639 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.16
SNRNP35-203ENST00000526639 NPHP3Q7Z494 1330 aa16.01■□□□□ 0.15
SNRNP35-203ENST00000526639 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
SNRNP35-203ENST00000526639 PNPLA6Q8IY17 1366 aa16.01■□□□□ 0.15
SNRNP35-203ENST00000526639 DAXXQ9UER7 740 aaPredicted RBP16■□□□□ 0.15
SNRNP35-203ENST00000526639 POTEAQ6S8J7 498 aa15.99■□□□□ 0.15
SNRNP35-203ENST00000526639 PMFBP1Q8TBY8 1022 aa15.99■□□□□ 0.15
SNRNP35-203ENST00000526639 ARHGEF28Q8N1W1 1705 aaKnown RBP15.98■□□□□ 0.15
SNRNP35-203ENST00000526639 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
SNRNP35-203ENST00000526639 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
SNRNP35-203ENST00000526639 WASLO00401 505 aaPredicted RBP15.98■□□□□ 0.15
SNRNP35-203ENST00000526639 SOCS7O14512 581 aa15.98■□□□□ 0.15
SNRNP35-203ENST00000526639 PXDNQ92626 1479 aa15.97■□□□□ 0.15
SNRNP35-203ENST00000526639 ADAMTS2O95450 1211 aa15.96■□□□□ 0.15
SNRNP35-203ENST00000526639 KRT28Q7Z3Y7 464 aa15.96■□□□□ 0.15
SNRNP35-203ENST00000526639 ADGRB2O60241 1585 aa15.96■□□□□ 0.14
SNRNP35-203ENST00000526639 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
SNRNP35-203ENST00000526639 C8orf37Q96NL8 207 aa15.95■□□□□ 0.14
SNRNP35-203ENST00000526639 USP32Q8NFA0 1604 aa15.95■□□□□ 0.14
SNRNP35-203ENST00000526639 NBPF8Q3BBV2 869 aa15.95■□□□□ 0.14
SNRNP35-203ENST00000526639 PSME1Q06323 249 aa15.94■□□□□ 0.14
SNRNP35-203ENST00000526639 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
SNRNP35-203ENST00000526639 CDK19Q9BWU1 502 aa15.93■□□□□ 0.14
SNRNP35-203ENST00000526639 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
SNRNP35-203ENST00000526639 ANKARQ7Z5J8 1434 aa15.93■□□□□ 0.14
SNRNP35-203ENST00000526639 TONSLQ96HA7 1378 aa15.93■□□□□ 0.14
SNRNP35-203ENST00000526639 ROCK2O75116 1388 aaKnown RBP15.92■□□□□ 0.14
SNRNP35-203ENST00000526639 TULP4Q9NRJ4 1543 aa15.92■□□□□ 0.14
SNRNP35-203ENST00000526639 CENPJQ9HC77 1338 aaPredicted RBP15.92■□□□□ 0.14
SNRNP35-203ENST00000526639 TRPM1Q7Z4N2 1603 aa15.92■□□□□ 0.14
SNRNP35-203ENST00000526639 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
SNRNP35-203ENST00000526639 AFF2P51816 1311 aa15.91■□□□□ 0.14
SNRNP35-203ENST00000526639 SPATA31A3Q5VYP0 1347 aa15.91■□□□□ 0.14
SNRNP35-203ENST00000526639 ZNF772Q68DY9 489 aaPredicted RBP15.91■□□□□ 0.14
SNRNP35-203ENST00000526639 NUDT16Q96DE0 195 aaKnown RBP15.91■□□□□ 0.14
SNRNP35-203ENST00000526639 NGLY1Q96IV0 654 aa15.91■□□□□ 0.14
SNRNP35-203ENST00000526639 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
SNRNP35-203ENST00000526639 EIF3AQ14152 1382 aaKnown RBP15.89■□□□□ 0.13
SNRNP35-203ENST00000526639 CABLES1Q8TDN4 633 aa15.88■□□□□ 0.13
SNRNP35-203ENST00000526639 ATP7BP35670 1465 aa15.88■□□□□ 0.13
SNRNP35-203ENST00000526639 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
SNRNP35-203ENST00000526639 COL22A1Q8NFW1 1626 aaPredicted RBP15.87■□□□□ 0.13
SNRNP35-203ENST00000526639 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
SNRNP35-203ENST00000526639 TNS3Q68CZ2 1445 aa15.87■□□□□ 0.13
SNRNP35-203ENST00000526639 GPRASP1Q5JY77 1395 aa15.86■□□□□ 0.13
SNRNP35-203ENST00000526639 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
SNRNP35-203ENST00000526639 CARD11Q9BXL7 1154 aa15.86■□□□□ 0.13
SNRNP35-203ENST00000526639 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
SNRNP35-203ENST00000526639 HAP1P54257 671 aaPredicted RBP15.85■□□□□ 0.13
SNRNP35-203ENST00000526639 QTRT2Q9H974 415 aaKnown RBP15.85■□□□□ 0.13
SNRNP35-203ENST00000526639 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
SNRNP35-203ENST00000526639 SBNO1A3KN83 1393 aa15.85■□□□□ 0.13
SNRNP35-203ENST00000526639 RXRBP28702 533 aa15.84■□□□□ 0.13
SNRNP35-203ENST00000526639 USP21Q9UK80 565 aa15.84■□□□□ 0.13
SNRNP35-203ENST00000526639 ACEP12821 1306 aa15.83■□□□□ 0.12
SNRNP35-203ENST00000526639 ITSN1Q15811 1721 aa15.82■□□□□ 0.12
SNRNP35-203ENST00000526639 FNBP4Q8N3X1 1017 aaPredicted RBP15.82■□□□□ 0.12
SNRNP35-203ENST00000526639 ARHGEF10O15013 1369 aa15.82■□□□□ 0.12
SNRNP35-203ENST00000526639 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
SNRNP35-203ENST00000526639 CCER1Q8TC90 406 aaPredicted RBP15.8■□□□□ 0.12
SNRNP35-203ENST00000526639 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
SNRNP35-203ENST00000526639 PPIP5K1Q6PFW1 1433 aa15.8■□□□□ 0.12
SNRNP35-203ENST00000526639 PLEKHG3A1L390 1219 aa15.8■□□□□ 0.12
SNRNP35-203ENST00000526639 CABP1Q9NZU7 370 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms