RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 LORP23490 312 aaPredicted RBP7.94□□□□□ -1.14
COPB1-205ENST00000526527 HPS1Q92902 700 aa7.94□□□□□ -1.14
COPB1-205ENST00000526527 MRGPRX2Q96LB1 330 aa7.94□□□□□ -1.14
COPB1-205ENST00000526527 TSHZ2Q9NRE2 1034 aa7.94□□□□□ -1.14
COPB1-205ENST00000526527 ZSCAN1Q8NBB4 408 aa7.93□□□□□ -1.14
COPB1-205ENST00000526527 DAXXQ9UER7 740 aaPredicted RBP7.93□□□□□ -1.14
COPB1-205ENST00000526527 GMPRP36959 345 aa7.92□□□□□ -1.14
COPB1-205ENST00000526527 MSS51Q4VC12 460 aa7.92□□□□□ -1.14
COPB1-205ENST00000526527 METTL3Q86U44 580 aaKnown RBP7.92□□□□□ -1.14
COPB1-205ENST00000526527 RDH13Q8NBN7 331 aa7.92□□□□□ -1.14
COPB1-205ENST00000526527 NXF1Q9UBU9 619 aaKnown RBP7.92□□□□□ -1.14
COPB1-205ENST00000526527 FECHP22830 423 aa7.91□□□□□ -1.14
COPB1-205ENST00000526527 TRIM32Q13049 653 aa7.91□□□□□ -1.14
COPB1-205ENST00000526527 GCGRP47871 477 aa7.9□□□□□ -1.14
COPB1-205ENST00000526527 NPAS3Q8IXF0 933 aa7.89□□□□□ -1.15
COPB1-205ENST00000526527 DDX11L8A8MPP1 907 aa7.88□□□□□ -1.15
COPB1-205ENST00000526527 RNF19BQ6ZMZ0 732 aa7.88□□□□□ -1.15
COPB1-205ENST00000526527 KCNV2Q8TDN2 545 aa7.88□□□□□ -1.15
COPB1-205ENST00000526527 IRF7Q92985 503 aa7.88□□□□□ -1.15
COPB1-205ENST00000526527 REPIN1Q9BWE0 567 aaKnown RBP7.88□□□□□ -1.15
COPB1-205ENST00000526527 MMP16P51512 607 aa7.87□□□□□ -1.15
COPB1-205ENST00000526527 SUZ12Q15022 739 aaKnown RBP7.87□□□□□ -1.15
COPB1-205ENST00000526527 HIC1Q14526 733 aa7.86□□□□□ -1.15
COPB1-205ENST00000526527 RC3H1Q5TC82 1133 aaKnown RBP7.86□□□□□ -1.15
COPB1-205ENST00000526527 GRIPAP1Q4V328 841 aa7.84□□□□□ -1.15
COPB1-205ENST00000526527 SULF1Q8IWU6 871 aa7.83□□□□□ -1.16
COPB1-205ENST00000526527 H3BM21 787 aa7.82□□□□□ -1.16
COPB1-205ENST00000526527 VEGFBP49765 207 aa7.82□□□□□ -1.16
COPB1-205ENST00000526527 SKOR1P84550 965 aa7.82□□□□□ -1.16
COPB1-205ENST00000526527 WNT7BP56706 349 aa7.81□□□□□ -1.16
COPB1-205ENST00000526527 Q3C1V9 767 aa7.81□□□□□ -1.16
COPB1-205ENST00000526527 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
COPB1-205ENST00000526527 ERBB4Q15303 1308 aa7.8□□□□□ -1.16
COPB1-205ENST00000526527 DXOO77932 396 aaKnown RBP7.8□□□□□ -1.16
COPB1-205ENST00000526527 ALDH1A1P00352 501 aa7.8□□□□□ -1.16
COPB1-205ENST00000526527 NLRP7Q8WX94 980 aa7.8□□□□□ -1.16
COPB1-205ENST00000526527 USB1Q9BQ65 265 aaKnown RBP7.79□□□□□ -1.16
COPB1-205ENST00000526527 GNPATO15228 680 aa7.78□□□□□ -1.16
COPB1-205ENST00000526527 SIAH2O43255 324 aa7.78□□□□□ -1.16
COPB1-205ENST00000526527 CCDC24Q8N4L8 307 aa7.78□□□□□ -1.16
COPB1-205ENST00000526527 SEMA3EO15041 775 aa7.77□□□□□ -1.17
COPB1-205ENST00000526527 CAPN5O15484 640 aaPredicted RBP7.77□□□□□ -1.17
COPB1-205ENST00000526527 BMP1P13497 986 aa7.77□□□□□ -1.17
COPB1-205ENST00000526527 PHOX2BQ99453 314 aa7.76□□□□□ -1.17
COPB1-205ENST00000526527 P3H3Q8IVL6 736 aa7.75□□□□□ -1.17
COPB1-205ENST00000526527 KCNMA1Q12791 1236 aa7.74□□□□□ -1.17
COPB1-205ENST00000526527 RBM26Q5T8P6 1007 aaKnown RBP7.73□□□□□ -1.17
COPB1-205ENST00000526527 ZFP42Q96MM3 310 aa7.73□□□□□ -1.17
COPB1-205ENST00000526527 WASF2Q9Y6W5 498 aa7.73□□□□□ -1.17
COPB1-205ENST00000526527 KCTD17Q8N5Z5 321 aa7.72□□□□□ -1.17
COPB1-205ENST00000526527 GSK3AP49840 483 aa7.71□□□□□ -1.18
COPB1-205ENST00000526527 EHBP1Q8NDI1 1231 aa7.71□□□□□ -1.18
COPB1-205ENST00000526527 GPR37O15354 613 aa7.7□□□□□ -1.18
COPB1-205ENST00000526527 KDM4AO75164 1064 aa7.7□□□□□ -1.18
COPB1-205ENST00000526527 CD46P15529 392 aa7.7□□□□□ -1.18
COPB1-205ENST00000526527 VSIG8P0DPA2 414 aa7.69□□□□□ -1.18
COPB1-205ENST00000526527 PTCRAQ6ISU1 281 aaPredicted RBP7.69□□□□□ -1.18
COPB1-205ENST00000526527 TESPA1A2RU30 521 aaPredicted RBP7.67□□□□□ -1.18
COPB1-205ENST00000526527 JUNDP17535 347 aa7.67□□□□□ -1.18
COPB1-205ENST00000526527 USP46P62068 366 aa7.66□□□□□ -1.18
COPB1-205ENST00000526527 SMYD5Q6GMV2 418 aa7.66□□□□□ -1.18
COPB1-205ENST00000526527 HLA-CQ95604 372 aa7.66□□□□□ -1.18
COPB1-205ENST00000526527 SH3BP2P78314 561 aa7.65□□□□□ -1.18
COPB1-205ENST00000526527 PLCB2Q00722 1185 aa7.65□□□□□ -1.18
COPB1-205ENST00000526527 MRPL14Q6P1L8 145 aaKnown RBP7.65□□□□□ -1.18
COPB1-205ENST00000526527 TMEM151AQ8N4L1 468 aa7.65□□□□□ -1.18
COPB1-205ENST00000526527 SCARF1Q14162 830 aa7.64□□□□□ -1.19
COPB1-205ENST00000526527 NUDT12Q9BQG2 462 aa7.64□□□□□ -1.19
COPB1-205ENST00000526527 GDF11O95390 407 aa7.63□□□□□ -1.19
COPB1-205ENST00000526527 PURBQ96QR8 312 aaKnown RBP7.63□□□□□ -1.19
COPB1-205ENST00000526527 SOBPA7XYQ1 873 aa7.62□□□□□ -1.19
COPB1-205ENST00000526527 HOXA2O43364 376 aa7.62□□□□□ -1.19
COPB1-205ENST00000526527 RASSF7Q02833 373 aa7.62□□□□□ -1.19
COPB1-205ENST00000526527 SYMPKQ92797 1274 aaKnown RBP7.62□□□□□ -1.19
COPB1-205ENST00000526527 MPNDQ8N594 471 aa7.61□□□□□ -1.19
COPB1-205ENST00000526527 PLEKHG3A1L390 1219 aa7.6□□□□□ -1.19
COPB1-205ENST00000526527 GUCA2AQ02747 115 aa7.6□□□□□ -1.19
COPB1-205ENST00000526527 NNTQ13423 1086 aa7.6□□□□□ -1.19
COPB1-205ENST00000526527 TIMP2P16035 220 aa7.59□□□□□ -1.19
COPB1-205ENST00000526527 RETREG3Q86VR2 466 aa7.59□□□□□ -1.19
COPB1-205ENST00000526527 WDR4P57081 412 aaKnown RBP7.58□□□□□ -1.2
COPB1-205ENST00000526527 KLF16Q9BXK1 252 aaPredicted RBP7.58□□□□□ -1.2
COPB1-205ENST00000526527 TLL2Q9Y6L7 1015 aa7.58□□□□□ -1.2
COPB1-205ENST00000526527 PPFIA3O75145 1194 aa7.57□□□□□ -1.2
COPB1-205ENST00000526527 VARSP26640 1264 aaKnown RBP7.57□□□□□ -1.2
COPB1-205ENST00000526527 BAP1Q92560 729 aa7.57□□□□□ -1.2
COPB1-205ENST00000526527 ADAMTS8Q9UP79 889 aa7.57□□□□□ -1.2
COPB1-205ENST00000526527 ADH1CP00326 375 aa7.56□□□□□ -1.2
COPB1-205ENST00000526527 CCNYL3P0C7X3 344 aa7.56□□□□□ -1.2
COPB1-205ENST00000526527 UNC93B1Q9H1C4 597 aa7.56□□□□□ -1.2
COPB1-205ENST00000526527 EVA1BQ9NVM1 165 aa7.56□□□□□ -1.2
COPB1-205ENST00000526527 MAN1A2O60476 641 aa7.55□□□□□ -1.2
COPB1-205ENST00000526527 MS4A1P11836 297 aa7.55□□□□□ -1.2
COPB1-205ENST00000526527 LINC01559Q495D7 138 aa7.55□□□□□ -1.2
COPB1-205ENST00000526527 RNF225M0QZC1 329 aaPredicted RBP7.54□□□□□ -1.2
COPB1-205ENST00000526527 HAP1P54257 671 aaPredicted RBP7.54□□□□□ -1.2
COPB1-205ENST00000526527 MDM2Q00987 491 aaPredicted RBP7.53□□□□□ -1.2
COPB1-205ENST00000526527 KCNH2Q12809 1159 aa7.53□□□□□ -1.2
COPB1-205ENST00000526527 ZNF511Q8NB15 262 aa7.53□□□□□ -1.2
COPB1-205ENST00000526527 KDM2AQ9Y2K7 1162 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms