RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 WNT7AO00755 349 aa6.11□□□□□ -1.43
TRAPPC4-207ENST00000526141 SEMA3EO15041 775 aa6.11□□□□□ -1.43
TRAPPC4-207ENST00000526141 GNPATO15228 680 aa6.11□□□□□ -1.43
TRAPPC4-207ENST00000526141 MSS51Q4VC12 460 aa6.11□□□□□ -1.43
TRAPPC4-207ENST00000526141 BRICD5Q6PL45 260 aa6.11□□□□□ -1.43
TRAPPC4-207ENST00000526141 Q3C1V9 767 aa6.1□□□□□ -1.43
TRAPPC4-207ENST00000526141 KIFC2Q96AC6 838 aa6.09□□□□□ -1.43
TRAPPC4-207ENST00000526141 REPIN1Q9BWE0 567 aaKnown RBP6.09□□□□□ -1.43
TRAPPC4-207ENST00000526141 ATP13A2Q9NQ11 1180 aa6.09□□□□□ -1.43
TRAPPC4-207ENST00000526141 SMPD1P17405 629 aa6.08□□□□□ -1.44
TRAPPC4-207ENST00000526141 FECHP22830 423 aa6.08□□□□□ -1.44
TRAPPC4-207ENST00000526141 TRIM32Q13049 653 aa6.08□□□□□ -1.44
TRAPPC4-207ENST00000526141 PRDM9Q9NQV7 894 aa6.08□□□□□ -1.44
TRAPPC4-207ENST00000526141 FAM181BA6NEQ2 426 aa6.07□□□□□ -1.44
TRAPPC4-207ENST00000526141 TERTO14746 1132 aaKnown RBP6.07□□□□□ -1.44
TRAPPC4-207ENST00000526141 PRKCSHP14314 528 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC4-207ENST00000526141 TRIM47Q96LD4 638 aa6.07□□□□□ -1.44
TRAPPC4-207ENST00000526141 MMP16P51512 607 aa6.06□□□□□ -1.44
TRAPPC4-207ENST00000526141 RBM26Q5T8P6 1007 aaKnown RBP6.06□□□□□ -1.44
TRAPPC4-207ENST00000526141 TESPA1A2RU30 521 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC4-207ENST00000526141 RNF19BQ6ZMZ0 732 aa6.05□□□□□ -1.44
TRAPPC4-207ENST00000526141 SLC16A10Q8TF71 515 aa6.05□□□□□ -1.44
TRAPPC4-207ENST00000526141 MRGPRX2Q96LB1 330 aa6.05□□□□□ -1.44
TRAPPC4-207ENST00000526141 J3QL48 77 aa6.04□□□□□ -1.44
TRAPPC4-207ENST00000526141 SNRPBP14678 240 aaKnown RBP6.04□□□□□ -1.44
TRAPPC4-207ENST00000526141 HAP1P54257 671 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC4-207ENST00000526141 WNT7BP56706 349 aa6.03□□□□□ -1.44
TRAPPC4-207ENST00000526141 USB1Q9BQ65 265 aaKnown RBP6.03□□□□□ -1.44
TRAPPC4-207ENST00000526141 DXOO77932 396 aaKnown RBP6.02□□□□□ -1.45
TRAPPC4-207ENST00000526141 NLRP7Q8WX94 980 aa6.02□□□□□ -1.45
TRAPPC4-207ENST00000526141 HPS1Q92902 700 aa6.02□□□□□ -1.45
TRAPPC4-207ENST00000526141 GPR37O15354 613 aa6.01□□□□□ -1.45
TRAPPC4-207ENST00000526141 USP46P62068 366 aa6.01□□□□□ -1.45
TRAPPC4-207ENST00000526141 RC3H1Q5TC82 1133 aaKnown RBP6.01□□□□□ -1.45
TRAPPC4-207ENST00000526141 CCDC24Q8N4L8 307 aa6.01□□□□□ -1.45
TRAPPC4-207ENST00000526141 KDM4AO75164 1064 aa6□□□□□ -1.45
TRAPPC4-207ENST00000526141 NPAS3Q8IXF0 933 aa6□□□□□ -1.45
TRAPPC4-207ENST00000526141 PHOX2BQ99453 314 aa6□□□□□ -1.45
TRAPPC4-207ENST00000526141 CD46P15529 392 aa5.99□□□□□ -1.45
TRAPPC4-207ENST00000526141 NXF1Q9UBU9 619 aaKnown RBP5.99□□□□□ -1.45
TRAPPC4-207ENST00000526141 ALDH1A1P00352 501 aa5.98□□□□□ -1.45
TRAPPC4-207ENST00000526141 GPIHBP1Q8IV16 184 aa5.98□□□□□ -1.45
TRAPPC4-207ENST00000526141 VSIG10Q8N0Z9 540 aa5.98□□□□□ -1.45
TRAPPC4-207ENST00000526141 IRF7Q92985 503 aa5.98□□□□□ -1.45
TRAPPC4-207ENST00000526141 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
TRAPPC4-207ENST00000526141 SKOR1P84550 965 aa5.96□□□□□ -1.46
TRAPPC4-207ENST00000526141 ZSCAN1Q8NBB4 408 aa5.96□□□□□ -1.46
TRAPPC4-207ENST00000526141 EHBP1Q8NDI1 1231 aa5.96□□□□□ -1.46
TRAPPC4-207ENST00000526141 WASF2Q9Y6W5 498 aa5.96□□□□□ -1.46
TRAPPC4-207ENST00000526141 CAPN5O15484 640 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC4-207ENST00000526141 JUNDP17535 347 aa5.95□□□□□ -1.46
TRAPPC4-207ENST00000526141 TPRNQ4KMQ1 711 aa5.95□□□□□ -1.46
TRAPPC4-207ENST00000526141 SIAH2O43255 324 aa5.93□□□□□ -1.46
TRAPPC4-207ENST00000526141 HOXA2O43364 376 aa5.93□□□□□ -1.46
TRAPPC4-207ENST00000526141 GMPRP36959 345 aa5.93□□□□□ -1.46
TRAPPC4-207ENST00000526141 MAP2K5Q13163 448 aa5.93□□□□□ -1.46
TRAPPC4-207ENST00000526141 RETREG3Q86VR2 466 aa5.92□□□□□ -1.46
TRAPPC4-207ENST00000526141 NUDT12Q9BQG2 462 aa5.92□□□□□ -1.46
TRAPPC4-207ENST00000526141 H3BM21 787 aa5.91□□□□□ -1.46
TRAPPC4-207ENST00000526141 IRF6O14896 467 aa5.91□□□□□ -1.46
TRAPPC4-207ENST00000526141 TRIM46Q7Z4K8 759 aa5.91□□□□□ -1.46
TRAPPC4-207ENST00000526141 PLEKHG3A1L390 1219 aa5.9□□□□□ -1.46
TRAPPC4-207ENST00000526141 TULP1O00294 542 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC4-207ENST00000526141 BMP1P13497 986 aa5.9□□□□□ -1.46
TRAPPC4-207ENST00000526141 MDM2Q00987 491 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC4-207ENST00000526141 NUTM1Q86Y26 1132 aa5.9□□□□□ -1.46
TRAPPC4-207ENST00000526141 HLA-CQ95604 372 aa5.9□□□□□ -1.46
TRAPPC4-207ENST00000526141 ARXQ96QS3 562 aa5.9□□□□□ -1.46
TRAPPC4-207ENST00000526141 MINK1Q8N4C8 1332 aaPredicted RBP5.9□□□□□ -1.47
TRAPPC4-207ENST00000526141 CCNYL3P0C7X3 344 aa5.89□□□□□ -1.47
TRAPPC4-207ENST00000526141 SCARF1Q14162 830 aa5.89□□□□□ -1.47
TRAPPC4-207ENST00000526141 MS4A1P11836 297 aa5.88□□□□□ -1.47
TRAPPC4-207ENST00000526141 CLCN1P35523 988 aa5.88□□□□□ -1.47
TRAPPC4-207ENST00000526141 SH3BP2P78314 561 aa5.88□□□□□ -1.47
TRAPPC4-207ENST00000526141 GUCA2AQ02747 115 aa5.88□□□□□ -1.47
TRAPPC4-207ENST00000526141 PTCRAQ6ISU1 281 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC4-207ENST00000526141 KRI1Q8N9T8 703 aaKnown RBP5.88□□□□□ -1.47
TRAPPC4-207ENST00000526141 ZFP42Q96MM3 310 aa5.88□□□□□ -1.47
TRAPPC4-207ENST00000526141 GPCPD1Q9NPB8 672 aa5.88□□□□□ -1.47
TRAPPC4-207ENST00000526141 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC4-207ENST00000526141 VARSP26640 1264 aaKnown RBP5.87□□□□□ -1.47
TRAPPC4-207ENST00000526141 VEGFBP49765 207 aa5.87□□□□□ -1.47
TRAPPC4-207ENST00000526141 MPNDQ8N594 471 aa5.87□□□□□ -1.47
TRAPPC4-207ENST00000526141 SYMPKQ92797 1274 aaKnown RBP5.87□□□□□ -1.47
TRAPPC4-207ENST00000526141 C6orf229H3BNL8 230 aa5.86□□□□□ -1.47
TRAPPC4-207ENST00000526141 FDX1P10109 184 aa5.86□□□□□ -1.47
TRAPPC4-207ENST00000526141 PTPRNQ16849 979 aa5.86□□□□□ -1.47
TRAPPC4-207ENST00000526141 FAM217BQ9NTX9 383 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC4-207ENST00000526141 EVA1BQ9NVM1 165 aa5.86□□□□□ -1.47
TRAPPC4-207ENST00000526141 ERBB4Q15303 1308 aa5.85□□□□□ -1.47
TRAPPC4-207ENST00000526141 MRPL14Q6P1L8 145 aaKnown RBP5.85□□□□□ -1.47
TRAPPC4-207ENST00000526141 UNC93B1Q9H1C4 597 aa5.85□□□□□ -1.47
TRAPPC4-207ENST00000526141 TIMELESSQ9UNS1 1208 aa5.85□□□□□ -1.47
TRAPPC4-207ENST00000526141 ADH1CP00326 375 aa5.84□□□□□ -1.47
TRAPPC4-207ENST00000526141 NNTQ13423 1086 aa5.84□□□□□ -1.47
TRAPPC4-207ENST00000526141 ERICH6Q7L0X2 663 aa5.84□□□□□ -1.47
TRAPPC4-207ENST00000526141 SPDYE5A6NIY4 337 aa5.83□□□□□ -1.48
TRAPPC4-207ENST00000526141 VSIG8P0DPA2 414 aa5.83□□□□□ -1.48
TRAPPC4-207ENST00000526141 KCNH2Q12809 1159 aa5.83□□□□□ -1.48
TRAPPC4-207ENST00000526141 ZNF511Q8NB15 262 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms