RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 FOXD1Q16676 465 aa25.15■■□□□ 1.62
CCS-204ENST00000526066 ORAI2Q96SN7 254 aa25.15■■□□□ 1.62
CCS-204ENST00000526066 ANKRD30BQ9BXX2 1392 aa25.15■■□□□ 1.62
CCS-204ENST00000526066 SOS2Q07890 1332 aaPredicted RBP25.14■■□□□ 1.62
CCS-204ENST00000526066 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.62
CCS-204ENST00000526066 USP21Q9UK80 565 aa25.14■■□□□ 1.62
CCS-204ENST00000526066 ATAD2Q6PL18 1390 aa25.13■■□□□ 1.61
CCS-204ENST00000526066 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
CCS-204ENST00000526066 TRPC5Q9UL62 973 aaPredicted RBP25.12■■□□□ 1.61
CCS-204ENST00000526066 PPLO60437 1756 aa25.12■■□□□ 1.61
CCS-204ENST00000526066 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
CCS-204ENST00000526066 NPHP3Q7Z494 1330 aa25.09■■□□□ 1.61
CCS-204ENST00000526066 ESCO1Q5FWF5 840 aa25.08■■□□□ 1.61
CCS-204ENST00000526066 CDC42BPGQ6DT37 1551 aa25.08■■□□□ 1.61
CCS-204ENST00000526066 COL22A1Q8NFW1 1626 aaPredicted RBP25.08■■□□□ 1.6
CCS-204ENST00000526066 LRPPRCP42704 1394 aaKnown RBP25.05■■□□□ 1.6
CCS-204ENST00000526066 FNBP4Q8N3X1 1017 aaPredicted RBP25.04■■□□□ 1.6
CCS-204ENST00000526066 CCDC144AA2RUR9 1427 aa25.03■■□□□ 1.6
CCS-204ENST00000526066 ATRNO75882 1429 aa25.01■■□□□ 1.59
CCS-204ENST00000526066 MARF1Q9Y4F3 1742 aaKnown RBP25■■□□□ 1.59
CCS-204ENST00000526066 MYOM2P54296 1465 aa25■■□□□ 1.59
CCS-204ENST00000526066 STK26Q9P289 416 aa24.99■■□□□ 1.59
CCS-204ENST00000526066 PXDNQ92626 1479 aa24.98■■□□□ 1.59
CCS-204ENST00000526066 FOXO3O43524 673 aa24.98■■□□□ 1.59
CCS-204ENST00000526066 XPCQ01831 940 aaPredicted RBP24.97■■□□□ 1.59
CCS-204ENST00000526066 ZRANB1Q9UGI0 708 aa24.96■■□□□ 1.59
CCS-204ENST00000526066 NUTM2FA1L443 756 aa24.95■■□□□ 1.58
CCS-204ENST00000526066 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
CCS-204ENST00000526066 SIN3AQ96ST3 1273 aa24.95■■□□□ 1.58
CCS-204ENST00000526066 CCDC125Q86Z20 511 aa24.94■■□□□ 1.58
CCS-204ENST00000526066 TECPR2O15040 1411 aa24.94■■□□□ 1.58
CCS-204ENST00000526066 ADGRF5Q8IZF2 1346 aa24.93■■□□□ 1.58
CCS-204ENST00000526066 KIF1AQ12756 1690 aa24.93■■□□□ 1.58
CCS-204ENST00000526066 KNDC1Q76NI1 1749 aa24.92■■□□□ 1.58
CCS-204ENST00000526066 WAPLQ7Z5K2 1190 aa24.92■■□□□ 1.58
CCS-204ENST00000526066 BCL9LQ86UU0 1499 aa24.91■■□□□ 1.58
CCS-204ENST00000526066 IFT172Q9UG01 1749 aa24.91■■□□□ 1.58
CCS-204ENST00000526066 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.9■■□□□ 1.58
CCS-204ENST00000526066 SPATA31E1Q6ZUB1 1445 aa24.9■■□□□ 1.58
CCS-204ENST00000526066 HAP1P54257 671 aaPredicted RBP24.9■■□□□ 1.58
CCS-204ENST00000526066 GJD4Q96KN9 370 aaPredicted RBP24.9■■□□□ 1.58
CCS-204ENST00000526066 ABCC11Q96J66 1382 aa24.9■■□□□ 1.58
CCS-204ENST00000526066 FMN2Q9NZ56 1722 aa24.89■■□□□ 1.58
CCS-204ENST00000526066 NEUROD1Q13562 356 aa24.88■■□□□ 1.57
CCS-204ENST00000526066 TMEM132EQ6IEE7 984 aa24.86■■□□□ 1.57
CCS-204ENST00000526066 UNC5CLQ8IV45 518 aa24.85■■□□□ 1.57
CCS-204ENST00000526066 PIK3C2GO75747 1445 aa24.85■■□□□ 1.57
CCS-204ENST00000526066 YTHDC2Q9H6S0 1430 aaKnown RBP24.85■■□□□ 1.57
CCS-204ENST00000526066 SPATA31A3Q5VYP0 1347 aa24.85■■□□□ 1.57
CCS-204ENST00000526066 TIMELESSQ9UNS1 1208 aa24.84■■□□□ 1.57
CCS-204ENST00000526066 PLEKHH1Q9ULM0 1364 aa24.83■■□□□ 1.57
CCS-204ENST00000526066 PSME1Q06323 249 aa24.83■■□□□ 1.57
CCS-204ENST00000526066 KRT28Q7Z3Y7 464 aa24.83■■□□□ 1.57
CCS-204ENST00000526066 SRCAPQ6ZRS2 3230 aa24.83■■□□□ 1.57
CCS-204ENST00000526066 USP32Q8NFA0 1604 aa24.83■■□□□ 1.56
CCS-204ENST00000526066 RALGAPBQ86X10 1494 aa24.82■■□□□ 1.56
CCS-204ENST00000526066 SF3B2Q13435 895 aaKnown RBP24.8■■□□□ 1.56
CCS-204ENST00000526066 SLIT2O94813 1529 aa24.8■■□□□ 1.56
CCS-204ENST00000526066 TONSLQ96HA7 1378 aa24.8■■□□□ 1.56
CCS-204ENST00000526066 BLMP54132 1417 aaPredicted RBP24.78■■□□□ 1.56
CCS-204ENST00000526066 TNS3Q68CZ2 1445 aa24.78■■□□□ 1.56
CCS-204ENST00000526066 SIRT1Q96EB6 747 aa24.78■■□□□ 1.56
CCS-204ENST00000526066 PHF8Q9UPP1 1060 aa24.78■■□□□ 1.56
CCS-204ENST00000526066 CCDC9Q9Y3X0 531 aaKnown RBP24.78■■□□□ 1.56
CCS-204ENST00000526066 GLI3P10071 1580 aa24.78■■□□□ 1.56
CCS-204ENST00000526066 LMOD2Q6P5Q4 547 aa24.77■■□□□ 1.56
CCS-204ENST00000526066 RGPD8O14715 1765 aaPredicted RBP24.76■■□□□ 1.55
CCS-204ENST00000526066 PLEKHG5O94827 1062 aa24.76■■□□□ 1.55
CCS-204ENST00000526066 STAC3Q96MF2 364 aa24.76■■□□□ 1.55
CCS-204ENST00000526066 EP400Q96L91 3159 aa24.75■■□□□ 1.55
CCS-204ENST00000526066 L3MBTL2Q969R5 705 aa24.75■■□□□ 1.55
CCS-204ENST00000526066 ARHGEF10O15013 1369 aa24.75■■□□□ 1.55
CCS-204ENST00000526066 PLCH1Q4KWH8 1693 aa24.74■■□□□ 1.55
CCS-204ENST00000526066 NWD2Q9ULI1 1742 aa24.74■■□□□ 1.55
CCS-204ENST00000526066 C14orf93Q9H972 538 aaKnown RBP24.73■■□□□ 1.55
CCS-204ENST00000526066 BRWD3Q6RI45 1802 aa24.72■■□□□ 1.55
CCS-204ENST00000526066 VPS72Q15906 364 aa24.72■■□□□ 1.55
CCS-204ENST00000526066 POGKQ9P215 609 aa24.72■■□□□ 1.55
CCS-204ENST00000526066 SBNO1A3KN83 1393 aa24.71■■□□□ 1.55
CCS-204ENST00000526066 SAFB2Q14151 953 aaKnown RBP eCLIP24.71■■□□□ 1.55
CCS-204ENST00000526066 SEPT12Q8IYM1 358 aa24.71■■□□□ 1.55
CCS-204ENST00000526066 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.55
CCS-204ENST00000526066 A0A0G2JS52 829 aa24.7■■□□□ 1.54
CCS-204ENST00000526066 MYT1Q01538 1121 aa24.7■■□□□ 1.54
CCS-204ENST00000526066 CABLES1Q8TDN4 633 aa24.7■■□□□ 1.54
CCS-204ENST00000526066 DCAF11Q8TEB1 546 aa24.7■■□□□ 1.54
CCS-204ENST00000526066 PRAM1Q96QH2 718 aa24.7■■□□□ 1.54
CCS-204ENST00000526066 CFAP70Q5T0N1 1121 aa24.69■■□□□ 1.54
CCS-204ENST00000526066 ABCA3Q99758 1704 aa24.69■■□□□ 1.54
CCS-204ENST00000526066 ANKARQ7Z5J8 1434 aa24.67■■□□□ 1.54
CCS-204ENST00000526066 ZEB1P37275 1124 aaPredicted RBP24.66■■□□□ 1.54
CCS-204ENST00000526066 KRT27Q7Z3Y8 459 aa24.66■■□□□ 1.54
CCS-204ENST00000526066 DLC1Q96QB1 1528 aa24.65■■□□□ 1.54
CCS-204ENST00000526066 EIF3AQ14152 1382 aaKnown RBP24.65■■□□□ 1.54
CCS-204ENST00000526066 DEFB132Q7Z7B7 95 aa24.64■■□□□ 1.54
CCS-204ENST00000526066 PMFBP1Q8TBY8 1022 aa24.64■■□□□ 1.54
CCS-204ENST00000526066 GPRASP1Q5JY77 1395 aa24.64■■□□□ 1.53
CCS-204ENST00000526066 KDM2AQ9Y2K7 1162 aa24.63■■□□□ 1.53
CCS-204ENST00000526066 ADGRB2O60241 1585 aa24.62■■□□□ 1.53
CCS-204ENST00000526066 ONECUT3O60422 494 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms