RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 SPATA31A6Q5VVP1 1343 aa17.84■□□□□ 0.45
SSBP3-210ENST00000525990 YTHDC2Q9H6S0 1430 aaKnown RBP17.83■□□□□ 0.45
SSBP3-210ENST00000525990 NUTM2BA6NNL0 878 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-210ENST00000525990 NUTM2EB1AL46 878 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-210ENST00000525990 NUTM2AQ8IVF1 878 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-210ENST00000525990 PNPLA6Q8IY17 1366 aa17.81■□□□□ 0.44
SSBP3-210ENST00000525990 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
SSBP3-210ENST00000525990 CFAP70Q5T0N1 1121 aa17.81■□□□□ 0.44
SSBP3-210ENST00000525990 ABCC11Q96J66 1382 aa17.8■□□□□ 0.44
SSBP3-210ENST00000525990 NUTM2FA1L443 756 aa17.8■□□□□ 0.44
SSBP3-210ENST00000525990 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
SSBP3-210ENST00000525990 C14orf93Q9H972 538 aaKnown RBP17.78■□□□□ 0.44
SSBP3-210ENST00000525990 ADGRB1O14514 1584 aa17.78■□□□□ 0.44
SSBP3-210ENST00000525990 LRRC59Q96AG4 307 aaKnown RBP17.77■□□□□ 0.44
SSBP3-210ENST00000525990 COL22A1Q8NFW1 1626 aaPredicted RBP17.76■□□□□ 0.43
SSBP3-210ENST00000525990 PXDNQ92626 1479 aa17.76■□□□□ 0.43
SSBP3-210ENST00000525990 SOS2Q07890 1332 aaPredicted RBP17.75■□□□□ 0.43
SSBP3-210ENST00000525990 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
SSBP3-210ENST00000525990 USP32Q8NFA0 1604 aa17.75■□□□□ 0.43
SSBP3-210ENST00000525990 MARF1Q9Y4F3 1742 aaKnown RBP17.75■□□□□ 0.43
SSBP3-210ENST00000525990 KIF1AQ12756 1690 aa17.74■□□□□ 0.43
SSBP3-210ENST00000525990 XPCQ01831 940 aaPredicted RBP17.74■□□□□ 0.43
SSBP3-210ENST00000525990 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
SSBP3-210ENST00000525990 ARHGEF28Q8N1W1 1705 aaKnown RBP17.73■□□□□ 0.43
SSBP3-210ENST00000525990 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.43
SSBP3-210ENST00000525990 DLC1Q96QB1 1528 aa17.72■□□□□ 0.43
SSBP3-210ENST00000525990 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
SSBP3-210ENST00000525990 HRCP23327 699 aa17.72■□□□□ 0.43
SSBP3-210ENST00000525990 AFF2P51816 1311 aa17.72■□□□□ 0.43
SSBP3-210ENST00000525990 FOXO3O43524 673 aa17.71■□□□□ 0.43
SSBP3-210ENST00000525990 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
SSBP3-210ENST00000525990 ADGRB2O60241 1585 aa17.7■□□□□ 0.42
SSBP3-210ENST00000525990 ADAMTS2O95450 1211 aa17.7■□□□□ 0.42
SSBP3-210ENST00000525990 C8orf37Q96NL8 207 aa17.7■□□□□ 0.42
SSBP3-210ENST00000525990 PRAM1Q96QH2 718 aa17.7■□□□□ 0.42
SSBP3-210ENST00000525990 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
SSBP3-210ENST00000525990 NPHP3Q7Z494 1330 aa17.68■□□□□ 0.42
SSBP3-210ENST00000525990 ABCA3Q99758 1704 aa17.67■□□□□ 0.42
SSBP3-210ENST00000525990 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
SSBP3-210ENST00000525990 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
SSBP3-210ENST00000525990 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
SSBP3-210ENST00000525990 KIAA1210Q9ULL0 1709 aa17.64■□□□□ 0.41
SSBP3-210ENST00000525990 POGKQ9P215 609 aa17.63■□□□□ 0.41
SSBP3-210ENST00000525990 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
SSBP3-210ENST00000525990 TRPM3Q9HCF6 1732 aaPredicted RBP17.63■□□□□ 0.41
SSBP3-210ENST00000525990 RXRBP28702 533 aa17.62■□□□□ 0.41
SSBP3-210ENST00000525990 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
SSBP3-210ENST00000525990 RGS12O14924 1447 aa17.62■□□□□ 0.41
SSBP3-210ENST00000525990 QTRT2Q9H974 415 aaKnown RBP17.6■□□□□ 0.41
SSBP3-210ENST00000525990 PHF8Q9UPP1 1060 aa17.6■□□□□ 0.41
SSBP3-210ENST00000525990 TULP4Q9NRJ4 1543 aa17.6■□□□□ 0.41
SSBP3-210ENST00000525990 ITSN1Q15811 1721 aa17.59■□□□□ 0.41
SSBP3-210ENST00000525990 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-210ENST00000525990 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
SSBP3-210ENST00000525990 PRR36Q9H6K5 1346 aa17.59■□□□□ 0.41
SSBP3-210ENST00000525990 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
SSBP3-210ENST00000525990 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.41
SSBP3-210ENST00000525990 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.41
SSBP3-210ENST00000525990 ALS2Q96Q42 1657 aa17.58■□□□□ 0.41
SSBP3-210ENST00000525990 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.41
SSBP3-210ENST00000525990 PMFBP1Q8TBY8 1022 aa17.58■□□□□ 0.4
SSBP3-210ENST00000525990 TNS3Q68CZ2 1445 aa17.57■□□□□ 0.4
SSBP3-210ENST00000525990 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
SSBP3-210ENST00000525990 USP21Q9UK80 565 aa17.57■□□□□ 0.4
SSBP3-210ENST00000525990 CRYBG1Q9Y4K1 1723 aa17.57■□□□□ 0.4
SSBP3-210ENST00000525990 TOPAZ1Q8N9V7 1692 aa17.57■□□□□ 0.4
SSBP3-210ENST00000525990 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
SSBP3-210ENST00000525990 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
SSBP3-210ENST00000525990 CABLES1Q8TDN4 633 aa17.55■□□□□ 0.4
SSBP3-210ENST00000525990 ATRNO75882 1429 aa17.55■□□□□ 0.4
SSBP3-210ENST00000525990 RBM6P78332 1123 aaKnown RBP17.54■□□□□ 0.4
SSBP3-210ENST00000525990 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
SSBP3-210ENST00000525990 STAC3Q96MF2 364 aa17.54■□□□□ 0.4
SSBP3-210ENST00000525990 ATP7BP35670 1465 aa17.54■□□□□ 0.4
SSBP3-210ENST00000525990 QRICH2Q9H0J4 1663 aa17.54■□□□□ 0.4
SSBP3-210ENST00000525990 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
SSBP3-210ENST00000525990 WASLO00401 505 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-210ENST00000525990 UPF1Q92900 1129 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSBP3-210ENST00000525990 SIN3AQ96ST3 1273 aa17.53■□□□□ 0.4
SSBP3-210ENST00000525990 GLI3P10071 1580 aa17.52■□□□□ 0.39
SSBP3-210ENST00000525990 PSME1Q06323 249 aa17.51■□□□□ 0.39
SSBP3-210ENST00000525990 LMOD2Q6P5Q4 547 aa17.51■□□□□ 0.39
SSBP3-210ENST00000525990 BRWD3Q6RI45 1802 aa17.51■□□□□ 0.39
SSBP3-210ENST00000525990 SLIT2O94813 1529 aa17.51■□□□□ 0.39
SSBP3-210ENST00000525990 SBNO1A3KN83 1393 aa17.51■□□□□ 0.39
SSBP3-210ENST00000525990 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
SSBP3-210ENST00000525990 TRPC5Q9UL62 973 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-210ENST00000525990 NRAPQ86VF7 1730 aa17.5■□□□□ 0.39
SSBP3-210ENST00000525990 L3MBTL2Q969R5 705 aa17.49■□□□□ 0.39
SSBP3-210ENST00000525990 PHRF1Q9P1Y6 1649 aaKnown RBP17.48■□□□□ 0.39
SSBP3-210ENST00000525990 EIF3AQ14152 1382 aaKnown RBP17.48■□□□□ 0.39
SSBP3-210ENST00000525990 ARHGEF10O15013 1369 aa17.46■□□□□ 0.39
SSBP3-210ENST00000525990 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
SSBP3-210ENST00000525990 RALGAPBQ86X10 1494 aa17.45■□□□□ 0.38
SSBP3-210ENST00000525990 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-210ENST00000525990 NUDT16Q96DE0 195 aaKnown RBP17.45■□□□□ 0.38
SSBP3-210ENST00000525990 CDK19Q9BWU1 502 aa17.45■□□□□ 0.38
SSBP3-210ENST00000525990 GPRASP1Q5JY77 1395 aa17.44■□□□□ 0.38
SSBP3-210ENST00000525990 NGDNQ8NEJ9 315 aaKnown RBP17.44■□□□□ 0.38
SSBP3-210ENST00000525990 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms