RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
GRAMD1B-205ENST00000525945 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
GRAMD1B-205ENST00000525945 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
GRAMD1B-205ENST00000525945 CCDC125Q86Z20 511 aa12.43□□□□□ -0.42
GRAMD1B-205ENST00000525945 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
GRAMD1B-205ENST00000525945 ATRNO75882 1429 aa12.43□□□□□ -0.42
GRAMD1B-205ENST00000525945 ITGAEP38570 1179 aa12.42□□□□□ -0.42
GRAMD1B-205ENST00000525945 ORAI2Q96SN7 254 aa12.42□□□□□ -0.42
GRAMD1B-205ENST00000525945 ROBO2Q9HCK4 1378 aa12.42□□□□□ -0.42
GRAMD1B-205ENST00000525945 MYOM2P54296 1465 aa12.4□□□□□ -0.42
GRAMD1B-205ENST00000525945 NPHP3Q7Z494 1330 aa12.4□□□□□ -0.42
GRAMD1B-205ENST00000525945 MARF1Q9Y4F3 1742 aaKnown RBP12.4□□□□□ -0.42
GRAMD1B-205ENST00000525945 CDC42BPGQ6DT37 1551 aa12.4□□□□□ -0.42
GRAMD1B-205ENST00000525945 RPGRIP1LQ68CZ1 1315 aa12.38□□□□□ -0.43
GRAMD1B-205ENST00000525945 LRPPRCP42704 1394 aaKnown RBP12.38□□□□□ -0.43
GRAMD1B-205ENST00000525945 BCL9LQ86UU0 1499 aa12.38□□□□□ -0.43
GRAMD1B-205ENST00000525945 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
GRAMD1B-205ENST00000525945 ESCO1Q5FWF5 840 aa12.37□□□□□ -0.43
GRAMD1B-205ENST00000525945 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
GRAMD1B-205ENST00000525945 PXDNQ92626 1479 aa12.37□□□□□ -0.43
GRAMD1B-205ENST00000525945 PPLO60437 1756 aa12.36□□□□□ -0.43
GRAMD1B-205ENST00000525945 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
GRAMD1B-205ENST00000525945 SRCAPQ6ZRS2 3230 aa12.35□□□□□ -0.43
GRAMD1B-205ENST00000525945 BLMP54132 1417 aaPredicted RBP12.35□□□□□ -0.43
GRAMD1B-205ENST00000525945 EP400Q96L91 3159 aa12.34□□□□□ -0.43
GRAMD1B-205ENST00000525945 FOXO3O43524 673 aa12.33□□□□□ -0.44
GRAMD1B-205ENST00000525945 KIF1AQ12756 1690 aa12.32□□□□□ -0.44
GRAMD1B-205ENST00000525945 NAIPQ13075 1403 aa12.32□□□□□ -0.44
GRAMD1B-205ENST00000525945 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
GRAMD1B-205ENST00000525945 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
GRAMD1B-205ENST00000525945 SLIT2O94813 1529 aa12.32□□□□□ -0.44
GRAMD1B-205ENST00000525945 GLI3P10071 1580 aa12.31□□□□□ -0.44
GRAMD1B-205ENST00000525945 TECPR2O15040 1411 aa12.31□□□□□ -0.44
GRAMD1B-205ENST00000525945 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
GRAMD1B-205ENST00000525945 SF3B2Q13435 895 aaKnown RBP12.31□□□□□ -0.44
GRAMD1B-205ENST00000525945 USP32Q8NFA0 1604 aa12.3□□□□□ -0.44
GRAMD1B-205ENST00000525945 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
GRAMD1B-205ENST00000525945 KNDC1Q76NI1 1749 aa12.3□□□□□ -0.44
GRAMD1B-205ENST00000525945 RRBP1Q9P2E9 1410 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-205ENST00000525945 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-205ENST00000525945 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
GRAMD1B-205ENST00000525945 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
GRAMD1B-205ENST00000525945 LRP5O75197 1615 aa12.28□□□□□ -0.44
GRAMD1B-205ENST00000525945 NUTM2FA1L443 756 aa12.27□□□□□ -0.45
GRAMD1B-205ENST00000525945 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.45
GRAMD1B-205ENST00000525945 NWD2Q9ULI1 1742 aa12.27□□□□□ -0.45
GRAMD1B-205ENST00000525945 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.45
GRAMD1B-205ENST00000525945 ABCC11Q96J66 1382 aa12.27□□□□□ -0.45
GRAMD1B-205ENST00000525945 ANKRD30BQ9BXX2 1392 aa12.27□□□□□ -0.45
GRAMD1B-205ENST00000525945 WAPLQ7Z5K2 1190 aa12.26□□□□□ -0.45
GRAMD1B-205ENST00000525945 STK26Q9P289 416 aa12.26□□□□□ -0.45
GRAMD1B-205ENST00000525945 TNS3Q68CZ2 1445 aa12.26□□□□□ -0.45
GRAMD1B-205ENST00000525945 PLCH1Q4KWH8 1693 aa12.26□□□□□ -0.45
GRAMD1B-205ENST00000525945 IFT172Q9UG01 1749 aa12.25□□□□□ -0.45
GRAMD1B-205ENST00000525945 PSME1Q06323 249 aa12.25□□□□□ -0.45
GRAMD1B-205ENST00000525945 VPS72Q15906 364 aa12.25□□□□□ -0.45
GRAMD1B-205ENST00000525945 KRT28Q7Z3Y7 464 aa12.25□□□□□ -0.45
GRAMD1B-205ENST00000525945 DEFB132Q7Z7B7 95 aa12.25□□□□□ -0.45
GRAMD1B-205ENST00000525945 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
GRAMD1B-205ENST00000525945 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
GRAMD1B-205ENST00000525945 ADGRF5Q8IZF2 1346 aa12.25□□□□□ -0.45
GRAMD1B-205ENST00000525945 PIK3C2GO75747 1445 aa12.23□□□□□ -0.45
GRAMD1B-205ENST00000525945 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
GRAMD1B-205ENST00000525945 PLEKHH1Q9ULM0 1364 aa12.23□□□□□ -0.45
GRAMD1B-205ENST00000525945 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
GRAMD1B-205ENST00000525945 KRT27Q7Z3Y8 459 aa12.23□□□□□ -0.45
GRAMD1B-205ENST00000525945 CCDC9Q9Y3X0 531 aaKnown RBP12.23□□□□□ -0.45
GRAMD1B-205ENST00000525945 ABCA3Q99758 1704 aa12.23□□□□□ -0.45
GRAMD1B-205ENST00000525945 SPATA31E1Q6ZUB1 1445 aa12.22□□□□□ -0.45
GRAMD1B-205ENST00000525945 YTHDC2Q9H6S0 1430 aaKnown RBP12.22□□□□□ -0.45
GRAMD1B-205ENST00000525945 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
GRAMD1B-205ENST00000525945 SIRT1Q96EB6 747 aa12.22□□□□□ -0.45
GRAMD1B-205ENST00000525945 NRXN1Q9ULB1 1477 aa12.21□□□□□ -0.45
GRAMD1B-205ENST00000525945 BAG6P46379 1132 aa12.21□□□□□ -0.45
GRAMD1B-205ENST00000525945 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
GRAMD1B-205ENST00000525945 TMEM132EQ6IEE7 984 aa12.21□□□□□ -0.45
GRAMD1B-205ENST00000525945 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.45
GRAMD1B-205ENST00000525945 A0A0G2JS52 829 aa12.19□□□□□ -0.46
GRAMD1B-205ENST00000525945 CABLES1Q8TDN4 633 aa12.19□□□□□ -0.46
GRAMD1B-205ENST00000525945 RGPD8O14715 1765 aaPredicted RBP12.19□□□□□ -0.46
GRAMD1B-205ENST00000525945 RGPD1P0DJD0 1748 aa12.18□□□□□ -0.46
GRAMD1B-205ENST00000525945 NRAPQ86VF7 1730 aa12.18□□□□□ -0.46
GRAMD1B-205ENST00000525945 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
GRAMD1B-205ENST00000525945 DHX57Q6P158 1386 aaKnown RBP12.18□□□□□ -0.46
GRAMD1B-205ENST00000525945 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
GRAMD1B-205ENST00000525945 ANKARQ7Z5J8 1434 aa12.17□□□□□ -0.46
GRAMD1B-205ENST00000525945 COL14A1Q05707 1796 aaKnown RBP12.16□□□□□ -0.46
GRAMD1B-205ENST00000525945 FAM83GA6ND36 823 aa12.16□□□□□ -0.46
GRAMD1B-205ENST00000525945 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
GRAMD1B-205ENST00000525945 HRCP23327 699 aa12.16□□□□□ -0.46
GRAMD1B-205ENST00000525945 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
GRAMD1B-205ENST00000525945 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
GRAMD1B-205ENST00000525945 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
GRAMD1B-205ENST00000525945 C14orf93Q9H972 538 aaKnown RBP12.15□□□□□ -0.46
GRAMD1B-205ENST00000525945 DLC1Q96QB1 1528 aa12.15□□□□□ -0.46
GRAMD1B-205ENST00000525945 DISP2A7MBM2 1401 aa12.14□□□□□ -0.47
GRAMD1B-205ENST00000525945 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
GRAMD1B-205ENST00000525945 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
GRAMD1B-205ENST00000525945 BTG4Q9NY30 223 aa12.14□□□□□ -0.47
GRAMD1B-205ENST00000525945 EIF3AQ14152 1382 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms