RNA–Protein interactions for RNA: ENST00000523518.1

SPDL1-215, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 3

Gene SPDL1, Length 489 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-215ENST00000523518 FOXC1Q12948 553 aa11.54□□□□□ -0.56
SPDL1-215ENST00000523518 MDM2Q00987 491 aaPredicted RBP11.53□□□□□ -0.56
SPDL1-215ENST00000523518 TREML4Q6UXN2 200 aa11.53□□□□□ -0.56
SPDL1-215ENST00000523518 CRIPAKQ8N1N5 446 aa11.53□□□□□ -0.56
SPDL1-215ENST00000523518 FAM117AQ9C073 453 aa11.53□□□□□ -0.56
SPDL1-215ENST00000523518 LCE2AQ5TA79 106 aaPredicted RBP11.52□□□□□ -0.57
SPDL1-215ENST00000523518 MORN1Q5T089 497 aa11.51□□□□□ -0.57
SPDL1-215ENST00000523518 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
SPDL1-215ENST00000523518 AVPP01185 164 aa11.5□□□□□ -0.57
SPDL1-215ENST00000523518 THAP11Q96EK4 314 aa11.5□□□□□ -0.57
SPDL1-215ENST00000523518 TOR4AQ9NXH8 423 aa11.5□□□□□ -0.57
SPDL1-215ENST00000523518 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
SPDL1-215ENST00000523518 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
SPDL1-215ENST00000523518 MS4A1P11836 297 aa11.49□□□□□ -0.57
SPDL1-215ENST00000523518 FCF1Q9Y324 198 aaKnown RBP11.49□□□□□ -0.57
SPDL1-215ENST00000523518 FUT2Q10981 343 aa11.47□□□□□ -0.57
SPDL1-215ENST00000523518 RDH13Q8NBN7 331 aa11.47□□□□□ -0.57
SPDL1-215ENST00000523518 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
SPDL1-215ENST00000523518 CLCN1P35523 988 aa11.46□□□□□ -0.57
SPDL1-215ENST00000523518 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
SPDL1-215ENST00000523518 FAM160A2Q8N612 972 aaPredicted RBP11.46□□□□□ -0.57
SPDL1-215ENST00000523518 GPCPD1Q9NPB8 672 aa11.46□□□□□ -0.57
SPDL1-215ENST00000523518 DACH1Q9UI36 760 aa11.46□□□□□ -0.57
SPDL1-215ENST00000523518 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.57
SPDL1-215ENST00000523518 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
SPDL1-215ENST00000523518 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
SPDL1-215ENST00000523518 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
SPDL1-215ENST00000523518 CTC1Q2NKJ3 1217 aa11.44□□□□□ -0.58
SPDL1-215ENST00000523518 SLC27A5Q9Y2P5 690 aa11.44□□□□□ -0.58
SPDL1-215ENST00000523518 DDX11L8A8MPP1 907 aa11.43□□□□□ -0.58
SPDL1-215ENST00000523518 AXIN1O15169 862 aa11.43□□□□□ -0.58
SPDL1-215ENST00000523518 GCGRP47871 477 aa11.42□□□□□ -0.58
SPDL1-215ENST00000523518 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
SPDL1-215ENST00000523518 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
SPDL1-215ENST00000523518 GMPR2Q9P2T1 348 aaKnown RBP11.41□□□□□ -0.58
SPDL1-215ENST00000523518 BRICD5Q6PL45 260 aa11.4□□□□□ -0.58
SPDL1-215ENST00000523518 DDRGK1Q96HY6 314 aa11.4□□□□□ -0.58
SPDL1-215ENST00000523518 PRDM9Q9NQV7 894 aa11.4□□□□□ -0.58
SPDL1-215ENST00000523518 FAM217BQ9NTX9 383 aaPredicted RBP11.4□□□□□ -0.58
SPDL1-215ENST00000523518 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
SPDL1-215ENST00000523518 SULF1Q8IWU6 871 aa11.39□□□□□ -0.59
SPDL1-215ENST00000523518 ZBTB24O43167 697 aaPredicted RBP11.38□□□□□ -0.59
SPDL1-215ENST00000523518 WFS1O76024 890 aa11.38□□□□□ -0.59
SPDL1-215ENST00000523518 MSS51Q4VC12 460 aa11.38□□□□□ -0.59
SPDL1-215ENST00000523518 TTC24A2A3L6 582 aaPredicted RBP11.36□□□□□ -0.59
SPDL1-215ENST00000523518 BEGAINQ9BUH8 593 aa11.35□□□□□ -0.59
SPDL1-215ENST00000523518 RNF19BQ6ZMZ0 732 aa11.34□□□□□ -0.59
SPDL1-215ENST00000523518 WNT7AO00755 349 aa11.33□□□□□ -0.6
SPDL1-215ENST00000523518 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
SPDL1-215ENST00000523518 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
SPDL1-215ENST00000523518 NFX1Q12986 1120 aaKnown RBP11.32□□□□□ -0.6
SPDL1-215ENST00000523518 SMPD1P17405 629 aa11.31□□□□□ -0.6
SPDL1-215ENST00000523518 MMP16P51512 607 aa11.3□□□□□ -0.6
SPDL1-215ENST00000523518 TRIM32Q13049 653 aa11.3□□□□□ -0.6
SPDL1-215ENST00000523518 WIPF1O43516 503 aa11.29□□□□□ -0.6
SPDL1-215ENST00000523518 Q3C1V9 767 aa11.29□□□□□ -0.6
SPDL1-215ENST00000523518 CD46P15529 392 aa11.28□□□□□ -0.6
SPDL1-215ENST00000523518 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
SPDL1-215ENST00000523518 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
SPDL1-215ENST00000523518 MRGPRX2Q96LB1 330 aa11.27□□□□□ -0.61
SPDL1-215ENST00000523518 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
SPDL1-215ENST00000523518 J3QL48 77 aa11.25□□□□□ -0.61
SPDL1-215ENST00000523518 SH3D19Q5HYK7 790 aa11.25□□□□□ -0.61
SPDL1-215ENST00000523518 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
SPDL1-215ENST00000523518 INSM1Q01101 510 aaPredicted RBP11.24□□□□□ -0.61
SPDL1-215ENST00000523518 TBC1D2Q9BYX2 928 aa11.24□□□□□ -0.61
SPDL1-215ENST00000523518 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
SPDL1-215ENST00000523518 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
SPDL1-215ENST00000523518 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
SPDL1-215ENST00000523518 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
SPDL1-215ENST00000523518 USB1Q9BQ65 265 aaKnown RBP11.23□□□□□ -0.61
SPDL1-215ENST00000523518 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
SPDL1-215ENST00000523518 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
SPDL1-215ENST00000523518 PROCA1Q8NCQ7 364 aaPredicted RBP11.22□□□□□ -0.61
SPDL1-215ENST00000523518 SPIRE2Q8WWL2 714 aa11.22□□□□□ -0.61
SPDL1-215ENST00000523518 TERTO14746 1132 aaKnown RBP11.21□□□□□ -0.61
SPDL1-215ENST00000523518 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.61
SPDL1-215ENST00000523518 SKIV2LQ15477 1246 aaKnown RBP11.2□□□□□ -0.62
SPDL1-215ENST00000523518 LCE2CQ5TA81 110 aa11.2□□□□□ -0.62
SPDL1-215ENST00000523518 HPS1Q92902 700 aa11.2□□□□□ -0.62
SPDL1-215ENST00000523518 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
SPDL1-215ENST00000523518 KDM4AO75164 1064 aa11.19□□□□□ -0.62
SPDL1-215ENST00000523518 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
SPDL1-215ENST00000523518 KIFC2Q96AC6 838 aa11.18□□□□□ -0.62
SPDL1-215ENST00000523518 WNT7BP56706 349 aa11.17□□□□□ -0.62
SPDL1-215ENST00000523518 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
SPDL1-215ENST00000523518 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
SPDL1-215ENST00000523518 SKOR1P84550 965 aa11.16□□□□□ -0.62
SPDL1-215ENST00000523518 ATP1B4Q9UN42 357 aaPredicted RBP11.16□□□□□ -0.62
SPDL1-215ENST00000523518 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
SPDL1-215ENST00000523518 NDUFV2P19404 249 aa11.15□□□□□ -0.62
SPDL1-215ENST00000523518 CLK2P49760 499 aaKnown RBP11.15□□□□□ -0.62
SPDL1-215ENST00000523518 USP46P62068 366 aa11.15□□□□□ -0.62
SPDL1-215ENST00000523518 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
SPDL1-215ENST00000523518 C14orf37Q86TY3 774 aa11.15□□□□□ -0.62
SPDL1-215ENST00000523518 CCDC24Q8N4L8 307 aa11.15□□□□□ -0.62
SPDL1-215ENST00000523518 DIXDC1Q155Q3 683 aa11.13□□□□□ -0.63
SPDL1-215ENST00000523518 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
SPDL1-215ENST00000523518 HLA-CQ95604 372 aa11.13□□□□□ -0.63
SPDL1-215ENST00000523518 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms