RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 CDC42BPGQ6DT37 1551 aa11.8□□□□□ -0.52
GM2A-202ENST00000523004 CCDC144AA2RUR9 1427 aa11.8□□□□□ -0.52
GM2A-202ENST00000523004 TECPR2O15040 1411 aa11.8□□□□□ -0.52
GM2A-202ENST00000523004 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
GM2A-202ENST00000523004 COL22A1Q8NFW1 1626 aaPredicted RBP11.79□□□□□ -0.52
GM2A-202ENST00000523004 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
GM2A-202ENST00000523004 FNBP4Q8N3X1 1017 aaPredicted RBP11.79□□□□□ -0.52
GM2A-202ENST00000523004 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
GM2A-202ENST00000523004 IFT172Q9UG01 1749 aa11.79□□□□□ -0.52
GM2A-202ENST00000523004 NPHP3Q7Z494 1330 aa11.79□□□□□ -0.52
GM2A-202ENST00000523004 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
GM2A-202ENST00000523004 ESCO1Q5FWF5 840 aa11.78□□□□□ -0.52
GM2A-202ENST00000523004 USP21Q9UK80 565 aa11.78□□□□□ -0.52
GM2A-202ENST00000523004 LRPPRCP42704 1394 aaKnown RBP11.78□□□□□ -0.52
GM2A-202ENST00000523004 MYOM2P54296 1465 aa11.77□□□□□ -0.52
GM2A-202ENST00000523004 PXDNQ92626 1479 aa11.77□□□□□ -0.52
GM2A-202ENST00000523004 FOXO3O43524 673 aa11.77□□□□□ -0.53
GM2A-202ENST00000523004 WAPLQ7Z5K2 1190 aa11.77□□□□□ -0.53
GM2A-202ENST00000523004 STK26Q9P289 416 aa11.77□□□□□ -0.53
GM2A-202ENST00000523004 TRPC5Q9UL62 973 aaPredicted RBP11.77□□□□□ -0.53
GM2A-202ENST00000523004 PIK3C2GO75747 1445 aa11.77□□□□□ -0.53
GM2A-202ENST00000523004 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
GM2A-202ENST00000523004 KNDC1Q76NI1 1749 aa11.76□□□□□ -0.53
GM2A-202ENST00000523004 PLEKHH1Q9ULM0 1364 aa11.75□□□□□ -0.53
GM2A-202ENST00000523004 ATRNO75882 1429 aa11.75□□□□□ -0.53
GM2A-202ENST00000523004 EP400Q96L91 3159 aa11.75□□□□□ -0.53
GM2A-202ENST00000523004 MARF1Q9Y4F3 1742 aaKnown RBP11.74□□□□□ -0.53
GM2A-202ENST00000523004 NUTM2FA1L443 756 aa11.74□□□□□ -0.53
GM2A-202ENST00000523004 XPCQ01831 940 aaPredicted RBP11.74□□□□□ -0.53
GM2A-202ENST00000523004 SIRT1Q96EB6 747 aa11.74□□□□□ -0.53
GM2A-202ENST00000523004 YTHDC2Q9H6S0 1430 aaKnown RBP11.74□□□□□ -0.53
GM2A-202ENST00000523004 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
GM2A-202ENST00000523004 SRCAPQ6ZRS2 3230 aa11.74□□□□□ -0.53
GM2A-202ENST00000523004 FMN2Q9NZ56 1722 aa11.74□□□□□ -0.53
GM2A-202ENST00000523004 ATAD2Q6PL18 1390 aa11.73□□□□□ -0.53
GM2A-202ENST00000523004 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
GM2A-202ENST00000523004 C14orf93Q9H972 538 aaKnown RBP11.72□□□□□ -0.53
GM2A-202ENST00000523004 NRXN1Q9ULB1 1477 aa11.71□□□□□ -0.53
GM2A-202ENST00000523004 SPATA31A3Q5VYP0 1347 aa11.71□□□□□ -0.53
GM2A-202ENST00000523004 KIF1AQ12756 1690 aa11.71□□□□□ -0.54
GM2A-202ENST00000523004 RGPD8O14715 1765 aaPredicted RBP11.7□□□□□ -0.54
GM2A-202ENST00000523004 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
GM2A-202ENST00000523004 DHX57Q6P158 1386 aaKnown RBP11.69□□□□□ -0.54
GM2A-202ENST00000523004 CFAP70Q5T0N1 1121 aa11.69□□□□□ -0.54
GM2A-202ENST00000523004 KRT28Q7Z3Y7 464 aa11.69□□□□□ -0.54
GM2A-202ENST00000523004 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
GM2A-202ENST00000523004 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
GM2A-202ENST00000523004 SLIT2O94813 1529 aa11.68□□□□□ -0.54
GM2A-202ENST00000523004 CCDC125Q86Z20 511 aa11.67□□□□□ -0.54
GM2A-202ENST00000523004 UNC5CLQ8IV45 518 aa11.67□□□□□ -0.54
GM2A-202ENST00000523004 USP32Q8NFA0 1604 aa11.67□□□□□ -0.54
GM2A-202ENST00000523004 PSME1Q06323 249 aa11.66□□□□□ -0.54
GM2A-202ENST00000523004 PRAM1Q96QH2 718 aa11.66□□□□□ -0.54
GM2A-202ENST00000523004 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
GM2A-202ENST00000523004 DLC1Q96QB1 1528 aa11.65□□□□□ -0.54
GM2A-202ENST00000523004 RALGAPBQ86X10 1494 aa11.65□□□□□ -0.54
GM2A-202ENST00000523004 GLI3P10071 1580 aa11.65□□□□□ -0.54
GM2A-202ENST00000523004 SBNO1A3KN83 1393 aa11.65□□□□□ -0.55
GM2A-202ENST00000523004 SAFB2Q14151 953 aaKnown RBP eCLIP11.64□□□□□ -0.55
GM2A-202ENST00000523004 RAB3GAP2Q9H2M9 1393 aa11.64□□□□□ -0.55
GM2A-202ENST00000523004 ADGRB1O14514 1584 aa11.63□□□□□ -0.55
GM2A-202ENST00000523004 ANKARQ7Z5J8 1434 aa11.63□□□□□ -0.55
GM2A-202ENST00000523004 CABLES1Q8TDN4 633 aa11.63□□□□□ -0.55
GM2A-202ENST00000523004 POGKQ9P215 609 aa11.63□□□□□ -0.55
GM2A-202ENST00000523004 ARHGEF10O15013 1369 aa11.63□□□□□ -0.55
GM2A-202ENST00000523004 BRWD3Q6RI45 1802 aa11.63□□□□□ -0.55
GM2A-202ENST00000523004 ADGRB2O60241 1585 aa11.62□□□□□ -0.55
GM2A-202ENST00000523004 HAP1P54257 671 aaPredicted RBP11.62□□□□□ -0.55
GM2A-202ENST00000523004 VPS72Q15906 364 aa11.62□□□□□ -0.55
GM2A-202ENST00000523004 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
GM2A-202ENST00000523004 ABCA3Q99758 1704 aa11.62□□□□□ -0.55
GM2A-202ENST00000523004 NWD2Q9ULI1 1742 aa11.62□□□□□ -0.55
GM2A-202ENST00000523004 ONECUT3O60422 494 aaPredicted RBP11.61□□□□□ -0.55
GM2A-202ENST00000523004 ADRA2BP18089 450 aa11.61□□□□□ -0.55
GM2A-202ENST00000523004 PMFBP1Q8TBY8 1022 aa11.61□□□□□ -0.55
GM2A-202ENST00000523004 TRAK1Q9UPV9 953 aa11.61□□□□□ -0.55
GM2A-202ENST00000523004 PLCH1Q4KWH8 1693 aa11.61□□□□□ -0.55
GM2A-202ENST00000523004 FAM83GA6ND36 823 aa11.6□□□□□ -0.55
GM2A-202ENST00000523004 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
GM2A-202ENST00000523004 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
GM2A-202ENST00000523004 STAC3Q96MF2 364 aa11.6□□□□□ -0.55
GM2A-202ENST00000523004 TRPM3Q9HCF6 1732 aaPredicted RBP11.6□□□□□ -0.55
GM2A-202ENST00000523004 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
GM2A-202ENST00000523004 DCAF11Q8TEB1 546 aa11.59□□□□□ -0.55
GM2A-202ENST00000523004 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
GM2A-202ENST00000523004 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
GM2A-202ENST00000523004 PRR36Q9H6K5 1346 aa11.59□□□□□ -0.55
GM2A-202ENST00000523004 EIF3AQ14152 1382 aaKnown RBP11.58□□□□□ -0.56
GM2A-202ENST00000523004 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
GM2A-202ENST00000523004 KDM2AQ9Y2K7 1162 aa11.58□□□□□ -0.56
GM2A-202ENST00000523004 ALS2Q96Q42 1657 aa11.58□□□□□ -0.56
GM2A-202ENST00000523004 GPRASP1Q5JY77 1395 aa11.57□□□□□ -0.56
GM2A-202ENST00000523004 TULP4Q9NRJ4 1543 aa11.57□□□□□ -0.56
GM2A-202ENST00000523004 WASLO00401 505 aaPredicted RBP11.57□□□□□ -0.56
GM2A-202ENST00000523004 HRCP23327 699 aa11.57□□□□□ -0.56
GM2A-202ENST00000523004 CCDC9Q9Y3X0 531 aaKnown RBP11.57□□□□□ -0.56
GM2A-202ENST00000523004 KRT27Q7Z3Y8 459 aa11.56□□□□□ -0.56
GM2A-202ENST00000523004 NRAPQ86VF7 1730 aa11.56□□□□□ -0.56
GM2A-202ENST00000523004 DEFB132Q7Z7B7 95 aa11.55□□□□□ -0.56
GM2A-202ENST00000523004 COL14A1Q05707 1796 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms