RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PLEKHH1Q9ULM0 1364 aa16.93■□□□□ 0.3
PVT1-215ENST00000522963 POGKQ9P215 609 aa16.93■□□□□ 0.3
PVT1-215ENST00000522963 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
PVT1-215ENST00000522963 KNDC1Q76NI1 1749 aa16.93■□□□□ 0.3
PVT1-215ENST00000522963 ADGRB1O14514 1584 aa16.92■□□□□ 0.3
PVT1-215ENST00000522963 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
PVT1-215ENST00000522963 FAM135BQ49AJ0 1406 aa16.91■□□□□ 0.3
PVT1-215ENST00000522963 CARD11Q9BXL7 1154 aa16.91■□□□□ 0.3
PVT1-215ENST00000522963 TECPR2O15040 1411 aa16.9■□□□□ 0.3
PVT1-215ENST00000522963 PRAM1Q96QH2 718 aa16.9■□□□□ 0.3
PVT1-215ENST00000522963 DCCP43146 1447 aa16.89■□□□□ 0.29
PVT1-215ENST00000522963 NUTM2FA1L443 756 aa16.89■□□□□ 0.29
PVT1-215ENST00000522963 MST1RQ04912 1400 aa16.87■□□□□ 0.29
PVT1-215ENST00000522963 BRINP3Q76B58 766 aa16.86■□□□□ 0.29
PVT1-215ENST00000522963 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
PVT1-215ENST00000522963 HIRIP3Q9BW71 556 aaPredicted RBP16.85■□□□□ 0.29
PVT1-215ENST00000522963 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
PVT1-215ENST00000522963 PHLPP1O60346 1717 aa16.84■□□□□ 0.29
PVT1-215ENST00000522963 DLC1Q96QB1 1528 aa16.84■□□□□ 0.29
PVT1-215ENST00000522963 C1orf167Q5SNV9 1468 aa16.83■□□□□ 0.28
PVT1-215ENST00000522963 USP47Q96K76 1375 aa16.83■□□□□ 0.28
PVT1-215ENST00000522963 ORAI2Q96SN7 254 aa16.83■□□□□ 0.28
PVT1-215ENST00000522963 CDC42BPGQ6DT37 1551 aa16.82■□□□□ 0.28
PVT1-215ENST00000522963 ESCO1Q5FWF5 840 aa16.82■□□□□ 0.28
PVT1-215ENST00000522963 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
PVT1-215ENST00000522963 ARHGEF28Q8N1W1 1705 aaKnown RBP16.82■□□□□ 0.28
PVT1-215ENST00000522963 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
PVT1-215ENST00000522963 EIF4G2P78344 907 aaKnown RBP eCLIP16.81■□□□□ 0.283e-6■■■■■ 29.6
PVT1-215ENST00000522963 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
PVT1-215ENST00000522963 ST20-MTHFSA0A0A6YYL1 179 aa16.78■□□□□ 0.28
PVT1-215ENST00000522963 FMN2Q9NZ56 1722 aa16.78■□□□□ 0.28
PVT1-215ENST00000522963 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.28
PVT1-215ENST00000522963 CENPJQ9HC77 1338 aaPredicted RBP16.76■□□□□ 0.27
PVT1-215ENST00000522963 AHDC1Q5TGY3 1603 aaPredicted RBP16.76■□□□□ 0.27
PVT1-215ENST00000522963 DISP3Q9P2K9 1392 aa16.76■□□□□ 0.27
PVT1-215ENST00000522963 COL16A1Q07092 1604 aaPredicted RBP16.75■□□□□ 0.27
PVT1-215ENST00000522963 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
PVT1-215ENST00000522963 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
PVT1-215ENST00000522963 FOXO3O43524 673 aa16.74■□□□□ 0.27
PVT1-215ENST00000522963 TESK2Q96S53 571 aa16.74■□□□□ 0.27
PVT1-215ENST00000522963 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
PVT1-215ENST00000522963 JCADQ9P266 1359 aa16.73■□□□□ 0.27
PVT1-215ENST00000522963 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
PVT1-215ENST00000522963 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
PVT1-215ENST00000522963 CDK19Q9BWU1 502 aa16.72■□□□□ 0.27
PVT1-215ENST00000522963 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.27
PVT1-215ENST00000522963 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
PVT1-215ENST00000522963 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
PVT1-215ENST00000522963 QRICH2Q9H0J4 1663 aa16.71■□□□□ 0.27
PVT1-215ENST00000522963 NPHP3Q7Z494 1330 aa16.7■□□□□ 0.26
PVT1-215ENST00000522963 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
PVT1-215ENST00000522963 NUTM2BA6NNL0 878 aaPredicted RBP16.7■□□□□ 0.26
PVT1-215ENST00000522963 NUTM2EB1AL46 878 aaPredicted RBP16.7■□□□□ 0.26
PVT1-215ENST00000522963 NUTM2AQ8IVF1 878 aaPredicted RBP16.7■□□□□ 0.26
PVT1-215ENST00000522963 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
PVT1-215ENST00000522963 SRPK2P78362 688 aaKnown RBP16.69■□□□□ 0.26
PVT1-215ENST00000522963 PRR36Q9H6K5 1346 aa16.69■□□□□ 0.26
PVT1-215ENST00000522963 USP32Q8NFA0 1604 aa16.68■□□□□ 0.26
PVT1-215ENST00000522963 NUDT16Q96DE0 195 aaKnown RBP16.68■□□□□ 0.26
PVT1-215ENST00000522963 TULP4Q9NRJ4 1543 aa16.68■□□□□ 0.26
PVT1-215ENST00000522963 ANKARQ7Z5J8 1434 aa16.68■□□□□ 0.26
PVT1-215ENST00000522963 KIF1AQ12756 1690 aa16.68■□□□□ 0.26
PVT1-215ENST00000522963 PSME1Q06323 249 aa16.67■□□□□ 0.26
PVT1-215ENST00000522963 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
PVT1-215ENST00000522963 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
PVT1-215ENST00000522963 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
PVT1-215ENST00000522963 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
PVT1-215ENST00000522963 MEX3CQ5U5Q3 659 aaKnown RBP16.66■□□□□ 0.26
PVT1-215ENST00000522963 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
PVT1-215ENST00000522963 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
PVT1-215ENST00000522963 TMF1P82094 1093 aa16.65■□□□□ 0.26
PVT1-215ENST00000522963 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
PVT1-215ENST00000522963 NGDNQ8NEJ9 315 aaKnown RBP16.65■□□□□ 0.26
PVT1-215ENST00000522963 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
PVT1-215ENST00000522963 SPATA31A6Q5VVP1 1343 aa16.64■□□□□ 0.25
PVT1-215ENST00000522963 EVC2Q86UK5 1308 aa16.64■□□□□ 0.25
PVT1-215ENST00000522963 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.25
PVT1-215ENST00000522963 PXDNQ92626 1479 aa16.63■□□□□ 0.25
PVT1-215ENST00000522963 ITSN1Q15811 1721 aa16.63■□□□□ 0.25
PVT1-215ENST00000522963 ATP7BP35670 1465 aa16.62■□□□□ 0.25
PVT1-215ENST00000522963 ZNF316A6NFI3 1004 aaPredicted RBP16.62■□□□□ 0.25
PVT1-215ENST00000522963 CCDC61Q9Y6R9 512 aa16.61■□□□□ 0.25
PVT1-215ENST00000522963 LRP6O75581 1613 aa16.6■□□□□ 0.25
PVT1-215ENST00000522963 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
PVT1-215ENST00000522963 KIF7Q2M1P5 1343 aa16.6■□□□□ 0.25
PVT1-215ENST00000522963 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
PVT1-215ENST00000522963 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
PVT1-215ENST00000522963 CDCA8Q53HL2 280 aa16.58■□□□□ 0.24
PVT1-215ENST00000522963 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
PVT1-215ENST00000522963 POLR3GLQ9BT43 218 aa16.58■□□□□ 0.24
PVT1-215ENST00000522963 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
PVT1-215ENST00000522963 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
PVT1-215ENST00000522963 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
PVT1-215ENST00000522963 TOPAZ1Q8N9V7 1692 aa16.57■□□□□ 0.24
PVT1-215ENST00000522963 ACEP12821 1306 aa16.57■□□□□ 0.24
PVT1-215ENST00000522963 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
PVT1-215ENST00000522963 CABP1Q9NZU7 370 aa16.57■□□□□ 0.24
PVT1-215ENST00000522963 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
PVT1-215ENST00000522963 C8orf37Q96NL8 207 aa16.56■□□□□ 0.24
PVT1-215ENST00000522963 PLEKHG3A1L390 1219 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms