RNA–Protein interactions for RNA: ENST00000522962.5

STAU2-222, Transcript of staufen double-stranded RNA binding protein 2, human

TSL 3

Gene STAU2, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STAU2-222	ENST00000522962	BRICD5	Q6PL45	260 aa		10.38	□□□□□ -0.75
STAU2-222	ENST00000522962	HOMEZ	Q8IX15	550 aa		10.38	□□□□□ -0.75
STAU2-222	ENST00000522962	WIPF1	O43516	503 aa		10.37	□□□□□ -0.75
STAU2-222	ENST00000522962	GTF3C3	Q9Y5Q9	886 aa		10.37	□□□□□ -0.75
STAU2-222	ENST00000522962	TTC24	A2A3L6	582 aa	Predicted RBP	10.36	□□□□□ -0.75
STAU2-222	ENST00000522962	STK17A	Q9UEE5	414 aa		10.36	□□□□□ -0.75
STAU2-222	ENST00000522962	DDX11L8	A8MPP1	907 aa		10.35	□□□□□ -0.75
STAU2-222	ENST00000522962	GNPAT	O15228	680 aa		10.35	□□□□□ -0.75
STAU2-222	ENST00000522962	ZBTB24	O43167	697 aa	Predicted RBP	10.35	□□□□□ -0.75
STAU2-222	ENST00000522962	FECH	P22830	423 aa		10.35	□□□□□ -0.75
STAU2-222	ENST00000522962	PRDM9	Q9NQV7	894 aa		10.35	□□□□□ -0.75
STAU2-222	ENST00000522962	WNT7A	O00755	349 aa		10.34	□□□□□ -0.75
STAU2-222	ENST00000522962	MSS51	Q4VC12	460 aa		10.34	□□□□□ -0.75
STAU2-222	ENST00000522962	SMPD1	P17405	629 aa		10.33	□□□□□ -0.76
STAU2-222	ENST00000522962	SNIP1	Q8TAD8	396 aa	Known RBP	10.33	□□□□□ -0.76
STAU2-222	ENST00000522962	RBM26	Q5T8P6	1007 aa	Known RBP	10.32	□□□□□ -0.76
STAU2-222	ENST00000522962	SULF1	Q8IWU6	871 aa		10.32	□□□□□ -0.76
STAU2-222	ENST00000522962	INSM1	Q01101	510 aa	Predicted RBP	10.31	□□□□□ -0.76
STAU2-222	ENST00000522962	ATP13A2	Q9NQ11	1180 aa		10.31	□□□□□ -0.76
STAU2-222	ENST00000522962	TESPA1	A2RU30	521 aa	Predicted RBP	10.3	□□□□□ -0.76
STAU2-222	ENST00000522962	GPR37	O15354	613 aa		10.3	□□□□□ -0.76
STAU2-222	ENST00000522962	RNF19B	Q6ZMZ0	732 aa		10.29	□□□□□ -0.76
STAU2-222	ENST00000522962	NLRP7	Q8WX94	980 aa		10.29	□□□□□ -0.76
STAU2-222	ENST00000522962	SNRPB	P14678	240 aa	Known RBP	10.28	□□□□□ -0.76
STAU2-222	ENST00000522962	MMP16	P51512	607 aa		10.28	□□□□□ -0.76
STAU2-222	ENST00000522962	TRIM32	Q13049	653 aa		10.28	□□□□□ -0.76
STAU2-222	ENST00000522962	GRIPAP1	Q4V328	841 aa		10.28	□□□□□ -0.76
STAU2-222	ENST00000522962	PHOX2B	Q99453	314 aa		10.28	□□□□□ -0.76
STAU2-222	ENST00000522962	TERT	O14746	1132 aa	Known RBP	10.27	□□□□□ -0.77
STAU2-222	ENST00000522962	LCE2C	Q5TA81	110 aa		10.27	□□□□□ -0.77
STAU2-222	ENST00000522962	SMYD5	Q6GMV2	418 aa		10.27	□□□□□ -0.77
STAU2-222	ENST00000522962	MRGPRX2	Q96LB1	330 aa		10.27	□□□□□ -0.77
STAU2-222	ENST00000522962	TRIM47	Q96LD4	638 aa		10.27	□□□□□ -0.77
STAU2-222	ENST00000522962	SENP2	Q9HC62	589 aa		10.27	□□□□□ -0.77
STAU2-222	ENST00000522962		J3QL48	77 aa		10.25	□□□□□ -0.77
STAU2-222	ENST00000522962		Q3C1V9	767 aa		10.25	□□□□□ -0.77
STAU2-222	ENST00000522962	HPS1	Q92902	700 aa		10.22	□□□□□ -0.77
STAU2-222	ENST00000522962	REPIN1	Q9BWE0	567 aa	Known RBP	10.22	□□□□□ -0.77
STAU2-222	ENST00000522962	DXO	O77932	396 aa	Known RBP	10.21	□□□□□ -0.77
STAU2-222	ENST00000522962	KIFC2	Q96AC6	838 aa		10.21	□□□□□ -0.77
STAU2-222	ENST00000522962	USB1	Q9BQ65	265 aa	Known RBP	10.2	□□□□□ -0.78
STAU2-222	ENST00000522962	CD46	P15529	392 aa		10.18	□□□□□ -0.78
STAU2-222	ENST00000522962	RC3H1	Q5TC82	1133 aa	Known RBP	10.18	□□□□□ -0.78
STAU2-222	ENST00000522962	WNT7B	P56706	349 aa		10.16	□□□□□ -0.78
STAU2-222	ENST00000522962	SKOR1	P84550	965 aa		10.16	□□□□□ -0.78
STAU2-222	ENST00000522962	KDM4A	O75164	1064 aa		10.15	□□□□□ -0.78
STAU2-222	ENST00000522962	RANGAP1	P46060	587 aa	Predicted RBP	10.15	□□□□□ -0.78
STAU2-222	ENST00000522962	TMEM132A	Q24JP5	1023 aa		10.15	□□□□□ -0.78
STAU2-222	ENST00000522962	GPIHBP1	Q8IV16	184 aa		10.13	□□□□□ -0.79
STAU2-222	ENST00000522962	CCDC24	Q8N4L8	307 aa		10.13	□□□□□ -0.79
STAU2-222	ENST00000522962	USP46	P62068	366 aa		10.12	□□□□□ -0.79
STAU2-222	ENST00000522962	C14orf37	Q86TY3	774 aa		10.12	□□□□□ -0.79
STAU2-222	ENST00000522962	SLC16A10	Q8TF71	515 aa		10.12	□□□□□ -0.79
STAU2-222	ENST00000522962	NXF1	Q9UBU9	619 aa	Known RBP	10.11	□□□□□ -0.79
STAU2-222	ENST00000522962	ALDH1A1	P00352	501 aa		10.1	□□□□□ -0.79
STAU2-222	ENST00000522962	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.1	□□□□□ -0.79	6e-6	■□□□□ 10
STAU2-222	ENST00000522962	FAM181B	A6NEQ2	426 aa		10.09	□□□□□ -0.79
STAU2-222	ENST00000522962	SIAH2	O43255	324 aa		10.09	□□□□□ -0.79
STAU2-222	ENST00000522962	NPAS3	Q8IXF0	933 aa		10.09	□□□□□ -0.79
STAU2-222	ENST00000522962	HLA-C	Q95604	372 aa		10.08	□□□□□ -0.8
STAU2-222	ENST00000522962	LOR	P23490	312 aa	Predicted RBP	10.07	□□□□□ -0.8
STAU2-222	ENST00000522962	HOXA2	O43364	376 aa		10.06	□□□□□ -0.8
STAU2-222	ENST00000522962	JUND	P17535	347 aa		10.06	□□□□□ -0.8
STAU2-222	ENST00000522962	GMPR	P36959	345 aa		10.06	□□□□□ -0.8
STAU2-222	ENST00000522962	TRIM46	Q7Z4K8	759 aa		10.05	□□□□□ -0.8
STAU2-222	ENST00000522962	MAP2K5	Q13163	448 aa		10.04	□□□□□ -0.8
STAU2-222	ENST00000522962	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.04	□□□□□ -0.8
STAU2-222	ENST00000522962	ZSCAN1	Q8NBB4	408 aa		10.04	□□□□□ -0.8
STAU2-222	ENST00000522962	IRF7	Q92985	503 aa		10.04	□□□□□ -0.8
STAU2-222	ENST00000522962	CAPN5	O15484	640 aa	Predicted RBP	10.03	□□□□□ -0.8
STAU2-222	ENST00000522962	IRF6	O14896	467 aa		10.02	□□□□□ -0.81
STAU2-222	ENST00000522962	BMP1	P13497	986 aa		10.02	□□□□□ -0.81
STAU2-222	ENST00000522962	EHBP1	Q8NDI1	1231 aa		10.02	□□□□□ -0.81
STAU2-222	ENST00000522962		H3BM21	787 aa		10.01	□□□□□ -0.81
STAU2-222	ENST00000522962	MDM2	Q00987	491 aa	Predicted RBP	10.01	□□□□□ -0.81
STAU2-222	ENST00000522962	SYMPK	Q92797	1274 aa	Known RBP	10.01	□□□□□ -0.81
STAU2-222	ENST00000522962	NUDT12	Q9BQG2	462 aa		10.01	□□□□□ -0.81
STAU2-222	ENST00000522962	WASF2	Q9Y6W5	498 aa		10.01	□□□□□ -0.81
STAU2-222	ENST00000522962	GUCA2A	Q02747	115 aa		10	□□□□□ -0.81
STAU2-222	ENST00000522962	RETREG3	Q86VR2	466 aa		9.99	□□□□□ -0.81
STAU2-222	ENST00000522962	SH3BP2	P78314	561 aa		9.98	□□□□□ -0.81
STAU2-222	ENST00000522962	VEGFB	P49765	207 aa		9.97	□□□□□ -0.81
STAU2-222	ENST00000522962	ZC3H15	Q8WU90	426 aa	Known RBP	9.97	□□□□□ -0.81
STAU2-222	ENST00000522962	ERBB4	Q15303	1308 aa		9.97	□□□□□ -0.81
STAU2-222	ENST00000522962	MINK1	Q8N4C8	1332 aa	Predicted RBP	9.97	□□□□□ -0.81
STAU2-222	ENST00000522962	LOC100996750	A0A140TA64	210 aa		9.95	□□□□□ -0.82
STAU2-222	ENST00000522962	ZFP42	Q96MM3	310 aa		9.95	□□□□□ -0.82
STAU2-222	ENST00000522962	KRTAP4-6	Q9BYQ5	205 aa		9.95	□□□□□ -0.82
STAU2-222	ENST00000522962	PODXL2	Q9NZ53	605 aa		9.95	□□□□□ -0.82
STAU2-222	ENST00000522962	FAM217B	Q9NTX9	383 aa	Predicted RBP	9.94	□□□□□ -0.82
STAU2-222	ENST00000522962	CCNYL3	P0C7X3	344 aa		9.93	□□□□□ -0.82
STAU2-222	ENST00000522962	NUTM1	Q86Y26	1132 aa		9.93	□□□□□ -0.82
STAU2-222	ENST00000522962	MPND	Q8N594	471 aa		9.93	□□□□□ -0.82
STAU2-222	ENST00000522962	GPCPD1	Q9NPB8	672 aa		9.93	□□□□□ -0.82
STAU2-222	ENST00000522962	MS4A1	P11836	297 aa		9.92	□□□□□ -0.82
STAU2-222	ENST00000522962	CLCN1	P35523	988 aa		9.92	□□□□□ -0.82
STAU2-222	ENST00000522962	KRI1	Q8N9T8	703 aa	Known RBP	9.92	□□□□□ -0.82
STAU2-222	ENST00000522962	EVA1B	Q9NVM1	165 aa		9.92	□□□□□ -0.82
STAU2-222	ENST00000522962	PCDHGC3	Q9UN70	934 aa		9.92	□□□□□ -0.82
STAU2-222	ENST00000522962	FDX1	P10109	184 aa		9.91	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms