RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 KNDC1Q76NI1 1749 aa31.54■■■□□ 2.64
HOXA3-206ENST00000522788 NHSL1Q5SYE7 1610 aa31.53■■■□□ 2.64
HOXA3-206ENST00000522788 SPATA31A6Q5VVP1 1343 aa31.53■■■□□ 2.64
HOXA3-206ENST00000522788 KDM2AQ9Y2K7 1162 aa31.53■■■□□ 2.64
HOXA3-206ENST00000522788 CDC42BPGQ6DT37 1551 aa31.51■■■□□ 2.64
HOXA3-206ENST00000522788 LRP6O75581 1613 aa31.5■■■□□ 2.63
HOXA3-206ENST00000522788 LAMC1P11047 1609 aa31.5■■■□□ 2.63
HOXA3-206ENST00000522788 STAC3Q96MF2 364 aa31.5■■■□□ 2.63
HOXA3-206ENST00000522788 LRRC59Q96AG4 307 aaKnown RBP31.48■■■□□ 2.63
HOXA3-206ENST00000522788 SHPRHQ149N8 1683 aa31.48■■■□□ 2.63
HOXA3-206ENST00000522788 ADGRB1O14514 1584 aa31.47■■■□□ 2.63
HOXA3-206ENST00000522788 POTEAQ6S8J7 498 aa31.45■■■□□ 2.63
HOXA3-206ENST00000522788 SOS2Q07890 1332 aaPredicted RBP31.45■■■□□ 2.62
HOXA3-206ENST00000522788 ESCO1Q5FWF5 840 aa31.43■■■□□ 2.62
HOXA3-206ENST00000522788 PRAM1Q96QH2 718 aa31.43■■■□□ 2.62
HOXA3-206ENST00000522788 PNPLA6Q8IY17 1366 aa31.42■■■□□ 2.62
HOXA3-206ENST00000522788 DLC1Q96QB1 1528 aa31.41■■■□□ 2.62
HOXA3-206ENST00000522788 NUTM2FA1L443 756 aa31.41■■■□□ 2.62
HOXA3-206ENST00000522788 NUTM2BA6NNL0 878 aaPredicted RBP31.37■■■□□ 2.61
HOXA3-206ENST00000522788 NUTM2EB1AL46 878 aaPredicted RBP31.37■■■□□ 2.61
HOXA3-206ENST00000522788 SAFB2Q14151 953 aaKnown RBP eCLIP31.37■■■□□ 2.61
HOXA3-206ENST00000522788 NUTM2AQ8IVF1 878 aaPredicted RBP31.37■■■□□ 2.61
HOXA3-206ENST00000522788 TRAK1Q9UPV9 953 aa31.37■■■□□ 2.61
HOXA3-206ENST00000522788 MEX3CQ5U5Q3 659 aaKnown RBP31.36■■■□□ 2.61
HOXA3-206ENST00000522788 NPHP3Q7Z494 1330 aa31.34■■■□□ 2.61
HOXA3-206ENST00000522788 POGKQ9P215 609 aa31.34■■■□□ 2.61
HOXA3-206ENST00000522788 FOXO3O43524 673 aa31.33■■■□□ 2.61
HOXA3-206ENST00000522788 FMN2Q9NZ56 1722 aa31.32■■■□□ 2.61
HOXA3-206ENST00000522788 PXDNQ92626 1479 aa31.3■■■□□ 2.6
HOXA3-206ENST00000522788 XPCQ01831 940 aaPredicted RBP31.28■■■□□ 2.6
HOXA3-206ENST00000522788 SIN3AQ96ST3 1273 aa31.26■■■□□ 2.59
HOXA3-206ENST00000522788 ZNF772Q68DY9 489 aaPredicted RBP31.25■■■□□ 2.59
HOXA3-206ENST00000522788 ADGRB2O60241 1585 aa31.24■■■□□ 2.59
HOXA3-206ENST00000522788 HIRIP3Q9BW71 556 aaPredicted RBP31.23■■■□□ 2.59
HOXA3-206ENST00000522788 PHF8Q9UPP1 1060 aa31.23■■■□□ 2.59
HOXA3-206ENST00000522788 MINK1Q8N4C8 1332 aaPredicted RBP31.23■■■□□ 2.59
HOXA3-206ENST00000522788 NBPF1Q3BBV0 1214 aa31.21■■■□□ 2.59
HOXA3-206ENST00000522788 L3MBTL2Q969R5 705 aa31.21■■■□□ 2.59
HOXA3-206ENST00000522788 ANKARQ7Z5J8 1434 aa31.2■■■□□ 2.59
HOXA3-206ENST00000522788 AFF2P51816 1311 aa31.2■■■□□ 2.58
HOXA3-206ENST00000522788 C8orf37Q96NL8 207 aa31.19■■■□□ 2.58
HOXA3-206ENST00000522788 ADAMTS2O95450 1211 aa31.18■■■□□ 2.58
HOXA3-206ENST00000522788 KRT28Q7Z3Y7 464 aa31.18■■■□□ 2.58
HOXA3-206ENST00000522788 KIF1AQ12756 1690 aa31.18■■■□□ 2.58
HOXA3-206ENST00000522788 COL22A1Q8NFW1 1626 aaPredicted RBP31.17■■■□□ 2.58
HOXA3-206ENST00000522788 WASLO00401 505 aaPredicted RBP31.17■■■□□ 2.58
HOXA3-206ENST00000522788 PRR36Q9H6K5 1346 aa31.17■■■□□ 2.58
HOXA3-206ENST00000522788 SPATA31A3Q5VYP0 1347 aa31.16■■■□□ 2.58
HOXA3-206ENST00000522788 USP32Q8NFA0 1604 aa31.16■■■□□ 2.58
HOXA3-206ENST00000522788 KIAA1210Q9ULL0 1709 aa31.15■■■□□ 2.58
HOXA3-206ENST00000522788 TRIM26Q12899 539 aaPredicted RBP31.15■■■□□ 2.58
HOXA3-206ENST00000522788 NEUROD1Q13562 356 aa31.14■■■□□ 2.58
HOXA3-206ENST00000522788 ARHGEF28Q8N1W1 1705 aaKnown RBP31.13■■■□□ 2.57
HOXA3-206ENST00000522788 RGPD8O14715 1765 aaPredicted RBP31.13■■■□□ 2.57
HOXA3-206ENST00000522788 PMFBP1Q8TBY8 1022 aa31.13■■■□□ 2.57
HOXA3-206ENST00000522788 EIF3AQ14152 1382 aaKnown RBP31.11■■■□□ 2.57
HOXA3-206ENST00000522788 TULP4Q9NRJ4 1543 aa31.11■■■□□ 2.57
HOXA3-206ENST00000522788 NGLY1Q96IV0 654 aa31.1■■■□□ 2.57
HOXA3-206ENST00000522788 PSME1Q06323 249 aa31.08■■■□□ 2.57
HOXA3-206ENST00000522788 SBNO1A3KN83 1393 aa31.07■■■□□ 2.56
HOXA3-206ENST00000522788 RXRBP28702 533 aa31.07■■■□□ 2.56
HOXA3-206ENST00000522788 FNBP4Q8N3X1 1017 aaPredicted RBP31.07■■■□□ 2.56
HOXA3-206ENST00000522788 TNS3Q68CZ2 1445 aa31.06■■■□□ 2.56
HOXA3-206ENST00000522788 QTRT2Q9H974 415 aaKnown RBP31.05■■■□□ 2.56
HOXA3-206ENST00000522788 CDK19Q9BWU1 502 aa31.03■■■□□ 2.56
HOXA3-206ENST00000522788 NUDT16Q96DE0 195 aaKnown RBP31.02■■■□□ 2.56
HOXA3-206ENST00000522788 ATP7BP35670 1465 aa31.01■■■□□ 2.56
HOXA3-206ENST00000522788 USP21Q9UK80 565 aa31.01■■■□□ 2.55
HOXA3-206ENST00000522788 CDK12Q9NYV4 1490 aaPredicted RBP30.98■■■□□ 2.55
HOXA3-206ENST00000522788 RBM6P78332 1123 aaKnown RBP30.98■■■□□ 2.55
HOXA3-206ENST00000522788 CENPJQ9HC77 1338 aaPredicted RBP30.98■■■□□ 2.55
HOXA3-206ENST00000522788 CABLES1Q8TDN4 633 aa30.97■■■□□ 2.55
HOXA3-206ENST00000522788 ARHGEF10O15013 1369 aa30.96■■■□□ 2.55
HOXA3-206ENST00000522788 GPRASP1Q5JY77 1395 aa30.96■■■□□ 2.55
HOXA3-206ENST00000522788 NBPF8Q3BBV2 869 aa30.96■■■□□ 2.55
HOXA3-206ENST00000522788 NGDNQ8NEJ9 315 aaKnown RBP30.95■■■□□ 2.55
HOXA3-206ENST00000522788 BCL9LQ86UU0 1499 aa30.95■■■□□ 2.54
HOXA3-206ENST00000522788 LMOD2Q6P5Q4 547 aa30.94■■■□□ 2.54
HOXA3-206ENST00000522788 TRPC5Q9UL62 973 aaPredicted RBP30.94■■■□□ 2.54
HOXA3-206ENST00000522788 TRPM1Q7Z4N2 1603 aa30.94■■■□□ 2.54
HOXA3-206ENST00000522788 ATRNO75882 1429 aa30.93■■■□□ 2.54
HOXA3-206ENST00000522788 TRPM3Q9HCF6 1732 aaPredicted RBP30.93■■■□□ 2.54
HOXA3-206ENST00000522788 CCDC61Q9Y6R9 512 aa30.92■■■□□ 2.54
HOXA3-206ENST00000522788 ROCK2O75116 1388 aaKnown RBP30.91■■■□□ 2.54
HOXA3-206ENST00000522788 RGS12O14924 1447 aa30.9■■■□□ 2.54
HOXA3-206ENST00000522788 PLEKHG3A1L390 1219 aa30.89■■■□□ 2.54
HOXA3-206ENST00000522788 PLEKHG5O94827 1062 aa30.89■■■□□ 2.54
HOXA3-206ENST00000522788 SLIT2O94813 1529 aa30.88■■■□□ 2.53
HOXA3-206ENST00000522788 MARF1Q9Y4F3 1742 aaKnown RBP30.88■■■□□ 2.53
HOXA3-206ENST00000522788 POLR3AO14802 1390 aaPredicted RBP30.88■■■□□ 2.53
HOXA3-206ENST00000522788 HAP1P54257 671 aaPredicted RBP30.86■■■□□ 2.53
HOXA3-206ENST00000522788 CABP2Q9NPB3 220 aa30.86■■■□□ 2.53
HOXA3-206ENST00000522788 ACEP12821 1306 aa30.86■■■□□ 2.53
HOXA3-206ENST00000522788 ALS2Q96Q42 1657 aa30.85■■■□□ 2.53
HOXA3-206ENST00000522788 TOPAZ1Q8N9V7 1692 aa30.84■■■□□ 2.53
HOXA3-206ENST00000522788 SRPK2P78362 688 aaKnown RBP30.84■■■□□ 2.53
HOXA3-206ENST00000522788 UNC5CLQ8IV45 518 aa30.84■■■□□ 2.53
HOXA3-206ENST00000522788 ITSN1Q15811 1721 aa30.84■■■□□ 2.53
HOXA3-206ENST00000522788 TONSLQ96HA7 1378 aa30.83■■■□□ 2.53
HOXA3-206ENST00000522788 PAK3O75914 559 aaPredicted RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms