RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
PABPC1-221ENST00000522720 L3MBTL2Q969R5 705 aa23.69■■□□□ 1.38
PABPC1-221ENST00000522720 MED1Q15648 1581 aaPredicted RBP23.69■■□□□ 1.38
PABPC1-221ENST00000522720 PRAM1Q96QH2 718 aa23.68■■□□□ 1.38
PABPC1-221ENST00000522720 TRAK1Q9UPV9 953 aa23.68■■□□□ 1.38
PABPC1-221ENST00000522720 COL16A1Q07092 1604 aaPredicted RBP23.68■■□□□ 1.38
PABPC1-221ENST00000522720 ORAI2Q96SN7 254 aa23.66■■□□□ 1.38
PABPC1-221ENST00000522720 POGKQ9P215 609 aa23.66■■□□□ 1.38
PABPC1-221ENST00000522720 KIAA1210Q9ULL0 1709 aa23.66■■□□□ 1.38
PABPC1-221ENST00000522720 JCADQ9P266 1359 aa23.65■■□□□ 1.38
PABPC1-221ENST00000522720 NHSL1Q5SYE7 1610 aa23.64■■□□□ 1.38
PABPC1-221ENST00000522720 SAFB2Q14151 953 aaKnown RBP eCLIP23.64■■□□□ 1.37
PABPC1-221ENST00000522720 DDX17Q92841 729 aaKnown RBP23.62■■□□□ 1.37
PABPC1-221ENST00000522720 NBPF1Q3BBV0 1214 aa23.61■■□□□ 1.37
PABPC1-221ENST00000522720 FMN2Q9NZ56 1722 aa23.6■■□□□ 1.37
PABPC1-221ENST00000522720 NUTM2FA1L443 756 aa23.6■■□□□ 1.37
PABPC1-221ENST00000522720 ESCO1Q5FWF5 840 aa23.6■■□□□ 1.37
PABPC1-221ENST00000522720 LRRC59Q96AG4 307 aaKnown RBP23.58■■□□□ 1.37
PABPC1-221ENST00000522720 ARHGEF28Q8N1W1 1705 aaKnown RBP23.56■■□□□ 1.36
PABPC1-221ENST00000522720 SOS2Q07890 1332 aaPredicted RBP23.56■■□□□ 1.36
PABPC1-221ENST00000522720 SPATA31A6Q5VVP1 1343 aa23.56■■□□□ 1.36
PABPC1-221ENST00000522720 SHPRHQ149N8 1683 aa23.55■■□□□ 1.36
PABPC1-221ENST00000522720 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
PABPC1-221ENST00000522720 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
PABPC1-221ENST00000522720 ADGRB2O60241 1585 aa23.55■■□□□ 1.36
PABPC1-221ENST00000522720 MINK1Q8N4C8 1332 aaPredicted RBP23.55■■□□□ 1.36
PABPC1-221ENST00000522720 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
PABPC1-221ENST00000522720 NPHP3Q7Z494 1330 aa23.53■■□□□ 1.36
PABPC1-221ENST00000522720 RGPD8O14715 1765 aaPredicted RBP23.52■■□□□ 1.36
PABPC1-221ENST00000522720 FOXO3O43524 673 aa23.52■■□□□ 1.36
PABPC1-221ENST00000522720 ILDR2Q71H61 639 aa23.52■■□□□ 1.36
PABPC1-221ENST00000522720 WASLO00401 505 aaPredicted RBP23.5■■□□□ 1.35
PABPC1-221ENST00000522720 TRPM1Q7Z4N2 1603 aa23.5■■□□□ 1.35
PABPC1-221ENST00000522720 TONSLQ96HA7 1378 aa23.5■■□□□ 1.35
PABPC1-221ENST00000522720 ANKARQ7Z5J8 1434 aa23.5■■□□□ 1.35
PABPC1-221ENST00000522720 PHF8Q9UPP1 1060 aa23.49■■□□□ 1.35
PABPC1-221ENST00000522720 KIF1AQ12756 1690 aa23.48■■□□□ 1.35
PABPC1-221ENST00000522720 NBPF8Q3BBV2 869 aa23.48■■□□□ 1.35
PABPC1-221ENST00000522720 PNPLA6Q8IY17 1366 aa23.48■■□□□ 1.35
PABPC1-221ENST00000522720 RGS17Q9UGC6 210 aaPredicted RBP23.47■■□□□ 1.35
PABPC1-221ENST00000522720 EIF3AQ14152 1382 aaKnown RBP23.47■■□□□ 1.35
PABPC1-221ENST00000522720 LRP6O75581 1613 aa23.46■■□□□ 1.35
PABPC1-221ENST00000522720 USP32Q8NFA0 1604 aa23.46■■□□□ 1.35
PABPC1-221ENST00000522720 PXDNQ92626 1479 aa23.46■■□□□ 1.35
PABPC1-221ENST00000522720 XPCQ01831 940 aaPredicted RBP23.45■■□□□ 1.34
PABPC1-221ENST00000522720 ROCK2O75116 1388 aaKnown RBP23.44■■□□□ 1.34
PABPC1-221ENST00000522720 NUTM2BA6NNL0 878 aaPredicted RBP23.44■■□□□ 1.34
PABPC1-221ENST00000522720 NUTM2EB1AL46 878 aaPredicted RBP23.44■■□□□ 1.34
PABPC1-221ENST00000522720 NUTM2AQ8IVF1 878 aaPredicted RBP23.44■■□□□ 1.34
PABPC1-221ENST00000522720 TULP4Q9NRJ4 1543 aa23.43■■□□□ 1.34
PABPC1-221ENST00000522720 PRR36Q9H6K5 1346 aa23.43■■□□□ 1.34
PABPC1-221ENST00000522720 CENPJQ9HC77 1338 aaPredicted RBP23.43■■□□□ 1.34
PABPC1-221ENST00000522720 KRT28Q7Z3Y7 464 aa23.42■■□□□ 1.34
PABPC1-221ENST00000522720 MEX3CQ5U5Q3 659 aaKnown RBP23.41■■□□□ 1.34
PABPC1-221ENST00000522720 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
PABPC1-221ENST00000522720 PMFBP1Q8TBY8 1022 aa23.4■■□□□ 1.34
PABPC1-221ENST00000522720 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
PABPC1-221ENST00000522720 PSME1Q06323 249 aa23.39■■□□□ 1.33
PABPC1-221ENST00000522720 NUDT16Q96DE0 195 aaKnown RBP23.39■■□□□ 1.33
PABPC1-221ENST00000522720 CLSPNQ9HAW4 1339 aa23.38■■□□□ 1.33
PABPC1-221ENST00000522720 SPATA31A3Q5VYP0 1347 aa23.37■■□□□ 1.33
PABPC1-221ENST00000522720 COL22A1Q8NFW1 1626 aaPredicted RBP23.37■■□□□ 1.33
PABPC1-221ENST00000522720 QRICH2Q9H0J4 1663 aa23.36■■□□□ 1.33
PABPC1-221ENST00000522720 ATP7BP35670 1465 aa23.36■■□□□ 1.33
PABPC1-221ENST00000522720 POTEAQ6S8J7 498 aa23.35■■□□□ 1.33
PABPC1-221ENST00000522720 RALGAPBQ86X10 1494 aa23.35■■□□□ 1.33
PABPC1-221ENST00000522720 CARD11Q9BXL7 1154 aa23.34■■□□□ 1.33
PABPC1-221ENST00000522720 SBNO1A3KN83 1393 aa23.34■■□□□ 1.33
PABPC1-221ENST00000522720 ITSN1Q15811 1721 aa23.33■■□□□ 1.33
PABPC1-221ENST00000522720 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
PABPC1-221ENST00000522720 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
PABPC1-221ENST00000522720 ADAMTS2O95450 1211 aa23.31■■□□□ 1.32
PABPC1-221ENST00000522720 SRPK2P78362 688 aaKnown RBP23.31■■□□□ 1.32
PABPC1-221ENST00000522720 ZNF772Q68DY9 489 aaPredicted RBP23.31■■□□□ 1.32
PABPC1-221ENST00000522720 TNS3Q68CZ2 1445 aa23.31■■□□□ 1.32
PABPC1-221ENST00000522720 C8orf37Q96NL8 207 aa23.3■■□□□ 1.32
PABPC1-221ENST00000522720 TIMELESSQ9UNS1 1208 aa23.3■■□□□ 1.32
PABPC1-221ENST00000522720 PLEKHG3A1L390 1219 aa23.29■■□□□ 1.32
PABPC1-221ENST00000522720 CABP2Q9NPB3 220 aa23.29■■□□□ 1.32
PABPC1-221ENST00000522720 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
PABPC1-221ENST00000522720 SOCS7O14512 581 aa23.28■■□□□ 1.32
PABPC1-221ENST00000522720 AFF2P51816 1311 aa23.28■■□□□ 1.32
PABPC1-221ENST00000522720 EVC2Q86UK5 1308 aa23.28■■□□□ 1.32
PABPC1-221ENST00000522720 ARHGEF10O15013 1369 aa23.27■■□□□ 1.32
PABPC1-221ENST00000522720 NGLY1Q96IV0 654 aa23.27■■□□□ 1.32
PABPC1-221ENST00000522720 TRPM3Q9HCF6 1732 aaPredicted RBP23.27■■□□□ 1.32
PABPC1-221ENST00000522720 LMOD2Q6P5Q4 547 aa23.26■■□□□ 1.31
PABPC1-221ENST00000522720 POLR3AO14802 1390 aaPredicted RBP23.26■■□□□ 1.31
PABPC1-221ENST00000522720 CCER1Q8TC90 406 aaPredicted RBP23.25■■□□□ 1.31
PABPC1-221ENST00000522720 ACEP12821 1306 aa23.25■■□□□ 1.31
PABPC1-221ENST00000522720 SBNO2Q9Y2G9 1366 aa23.23■■□□□ 1.31
PABPC1-221ENST00000522720 PPIP5K1Q6PFW1 1433 aa23.23■■□□□ 1.31
PABPC1-221ENST00000522720 FNBP4Q8N3X1 1017 aaPredicted RBP23.22■■□□□ 1.31
PABPC1-221ENST00000522720 CABLES1Q8TDN4 633 aa23.22■■□□□ 1.31
PABPC1-221ENST00000522720 ALS2Q96Q42 1657 aa23.22■■□□□ 1.31
PABPC1-221ENST00000522720 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
PABPC1-221ENST00000522720 PAK3O75914 559 aaPredicted RBP23.21■■□□□ 1.31
PABPC1-221ENST00000522720 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
PABPC1-221ENST00000522720 HAP1P54257 671 aaPredicted RBP23.18■■□□□ 1.3
PABPC1-221ENST00000522720 PLEKHG5O94827 1062 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms