RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 C8orf37Q96NL8 207 aa31.84■■■□□ 2.69
HOXA3-205ENST00000522456 MYOM2P54296 1465 aa31.84■■■□□ 2.69
HOXA3-205ENST00000522456 PIK3C2GO75747 1445 aa31.83■■■□□ 2.69
HOXA3-205ENST00000522456 ORAI2Q96SN7 254 aa31.82■■■□□ 2.68
HOXA3-205ENST00000522456 UPF1Q92900 1129 aaKnown RBP eCLIP31.81■■■□□ 2.68
HOXA3-205ENST00000522456 DCAF11Q8TEB1 546 aa31.8■■■□□ 2.68
HOXA3-205ENST00000522456 SOS2Q07890 1332 aaPredicted RBP31.79■■■□□ 2.68
HOXA3-205ENST00000522456 CDC42BPGQ6DT37 1551 aa31.79■■■□□ 2.68
HOXA3-205ENST00000522456 KDM2AQ9Y2K7 1162 aa31.79■■■□□ 2.68
HOXA3-205ENST00000522456 DHX57Q6P158 1386 aaKnown RBP31.79■■■□□ 2.68
HOXA3-205ENST00000522456 NRXN1Q9ULB1 1477 aa31.78■■■□□ 2.68
HOXA3-205ENST00000522456 PCGF6Q9BYE7 350 aa31.78■■■□□ 2.68
HOXA3-205ENST00000522456 ADAMTS2O95450 1211 aa31.74■■■□□ 2.67
HOXA3-205ENST00000522456 QTRT2Q9H974 415 aaKnown RBP31.73■■■□□ 2.67
HOXA3-205ENST00000522456 RGS12O14924 1447 aa31.73■■■□□ 2.67
HOXA3-205ENST00000522456 TECPR2O15040 1411 aa31.72■■■□□ 2.67
HOXA3-205ENST00000522456 RBM6P78332 1123 aaKnown RBP31.71■■■□□ 2.67
HOXA3-205ENST00000522456 NGLY1Q96IV0 654 aa31.71■■■□□ 2.67
HOXA3-205ENST00000522456 STAC3Q96MF2 364 aa31.71■■■□□ 2.67
HOXA3-205ENST00000522456 SIN3AQ96ST3 1273 aa31.71■■■□□ 2.67
HOXA3-205ENST00000522456 LRPPRCP42704 1394 aaKnown RBP31.7■■■□□ 2.67
HOXA3-205ENST00000522456 COL22A1Q8NFW1 1626 aaPredicted RBP31.7■■■□□ 2.66
HOXA3-205ENST00000522456 KNDC1Q76NI1 1749 aa31.69■■■□□ 2.66
HOXA3-205ENST00000522456 NEUROD1Q13562 356 aa31.69■■■□□ 2.66
HOXA3-205ENST00000522456 CFAP70Q5T0N1 1121 aa31.69■■■□□ 2.66
HOXA3-205ENST00000522456 TMEM132EQ6IEE7 984 aa31.69■■■□□ 2.66
HOXA3-205ENST00000522456 C14orf93Q9H972 538 aaKnown RBP31.69■■■□□ 2.66
HOXA3-205ENST00000522456 ESCO1Q5FWF5 840 aa31.68■■■□□ 2.66
HOXA3-205ENST00000522456 STK26Q9P289 416 aa31.68■■■□□ 2.66
HOXA3-205ENST00000522456 NPHP3Q7Z494 1330 aa31.68■■■□□ 2.66
HOXA3-205ENST00000522456 ABCC11Q96J66 1382 aa31.66■■■□□ 2.66
HOXA3-205ENST00000522456 PXDNQ92626 1479 aa31.65■■■□□ 2.66
HOXA3-205ENST00000522456 WAPLQ7Z5K2 1190 aa31.64■■■□□ 2.66
HOXA3-205ENST00000522456 YTHDC2Q9H6S0 1430 aaKnown RBP31.64■■■□□ 2.66
HOXA3-205ENST00000522456 USP21Q9UK80 565 aa31.62■■■□□ 2.65
HOXA3-205ENST00000522456 PLEKHH1Q9ULM0 1364 aa31.6■■■□□ 2.65
HOXA3-205ENST00000522456 NUTM2FA1L443 756 aa31.58■■■□□ 2.65
HOXA3-205ENST00000522456 FOXO3O43524 673 aa31.58■■■□□ 2.65
HOXA3-205ENST00000522456 FNBP4Q8N3X1 1017 aaPredicted RBP31.58■■■□□ 2.65
HOXA3-205ENST00000522456 XPCQ01831 940 aaPredicted RBP31.57■■■□□ 2.64
HOXA3-205ENST00000522456 L3MBTL2Q969R5 705 aa31.57■■■□□ 2.64
HOXA3-205ENST00000522456 TRPC5Q9UL62 973 aaPredicted RBP31.57■■■□□ 2.64
HOXA3-205ENST00000522456 FMN2Q9NZ56 1722 aa31.57■■■□□ 2.64
HOXA3-205ENST00000522456 SIRT1Q96EB6 747 aa31.55■■■□□ 2.64
HOXA3-205ENST00000522456 ATRNO75882 1429 aa31.54■■■□□ 2.64
HOXA3-205ENST00000522456 KIF1AQ12756 1690 aa31.53■■■□□ 2.64
HOXA3-205ENST00000522456 MARF1Q9Y4F3 1742 aaKnown RBP31.52■■■□□ 2.64
HOXA3-205ENST00000522456 ADGRB1O14514 1584 aa31.52■■■□□ 2.64
HOXA3-205ENST00000522456 DLC1Q96QB1 1528 aa31.51■■■□□ 2.63
HOXA3-205ENST00000522456 ATAD2Q6PL18 1390 aa31.49■■■□□ 2.63
HOXA3-205ENST00000522456 BCL9LQ86UU0 1499 aa31.47■■■□□ 2.63
HOXA3-205ENST00000522456 TRAK1Q9UPV9 953 aa31.44■■■□□ 2.62
HOXA3-205ENST00000522456 SPATA31A3Q5VYP0 1347 aa31.44■■■□□ 2.62
HOXA3-205ENST00000522456 KIAA1210Q9ULL0 1709 aa31.41■■■□□ 2.62
HOXA3-205ENST00000522456 PRAM1Q96QH2 718 aa31.41■■■□□ 2.62
HOXA3-205ENST00000522456 POGKQ9P215 609 aa31.41■■■□□ 2.62
HOXA3-205ENST00000522456 TONSLQ96HA7 1378 aa31.41■■■□□ 2.62
HOXA3-205ENST00000522456 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.4■■■□□ 2.62
HOXA3-205ENST00000522456 RGPD8O14715 1765 aaPredicted RBP31.39■■■□□ 2.62
HOXA3-205ENST00000522456 KRT28Q7Z3Y7 464 aa31.39■■■□□ 2.62
HOXA3-205ENST00000522456 SAFB2Q14151 953 aaKnown RBP eCLIP31.38■■■□□ 2.61
HOXA3-205ENST00000522456 NBPF1Q3BBV0 1214 aa31.38■■■□□ 2.61
HOXA3-205ENST00000522456 USP32Q8NFA0 1604 aa31.38■■■□□ 2.61
HOXA3-205ENST00000522456 PHF8Q9UPP1 1060 aa31.37■■■□□ 2.61
HOXA3-205ENST00000522456 TNS3Q68CZ2 1445 aa31.36■■■□□ 2.61
HOXA3-205ENST00000522456 GJD4Q96KN9 370 aaPredicted RBP31.36■■■□□ 2.61
HOXA3-205ENST00000522456 ADGRB2O60241 1585 aa31.35■■■□□ 2.61
HOXA3-205ENST00000522456 SLIT2O94813 1529 aa31.35■■■□□ 2.61
HOXA3-205ENST00000522456 EP400Q96L91 3159 aa31.33■■■□□ 2.61
HOXA3-205ENST00000522456 PSME1Q06323 249 aa31.33■■■□□ 2.61
HOXA3-205ENST00000522456 UNC5CLQ8IV45 518 aa31.32■■■□□ 2.6
HOXA3-205ENST00000522456 ARHGEF28Q8N1W1 1705 aaKnown RBP31.3■■■□□ 2.6
HOXA3-205ENST00000522456 RALGAPBQ86X10 1494 aa31.3■■■□□ 2.6
HOXA3-205ENST00000522456 ANKARQ7Z5J8 1434 aa31.3■■■□□ 2.6
HOXA3-205ENST00000522456 GLI3P10071 1580 aa31.3■■■□□ 2.6
HOXA3-205ENST00000522456 SBNO1A3KN83 1393 aa31.3■■■□□ 2.6
HOXA3-205ENST00000522456 HAP1P54257 671 aaPredicted RBP31.29■■■□□ 2.6
HOXA3-205ENST00000522456 CCER1Q8TC90 406 aaPredicted RBP31.29■■■□□ 2.6
HOXA3-205ENST00000522456 CLSPNQ9HAW4 1339 aa31.27■■■□□ 2.6
HOXA3-205ENST00000522456 NBPF8Q3BBV2 869 aa31.27■■■□□ 2.6
HOXA3-205ENST00000522456 EIF3AQ14152 1382 aaKnown RBP31.27■■■□□ 2.6
HOXA3-205ENST00000522456 ABCA3Q99758 1704 aa31.27■■■□□ 2.6
HOXA3-205ENST00000522456 ARHGEF10O15013 1369 aa31.26■■■□□ 2.59
HOXA3-205ENST00000522456 CABLES1Q8TDN4 633 aa31.25■■■□□ 2.59
HOXA3-205ENST00000522456 MINK1Q8N4C8 1332 aaPredicted RBP31.24■■■□□ 2.59
HOXA3-205ENST00000522456 TRPM1Q7Z4N2 1603 aa31.24■■■□□ 2.59
HOXA3-205ENST00000522456 PLCH1Q4KWH8 1693 aa31.23■■■□□ 2.59
HOXA3-205ENST00000522456 LMOD2Q6P5Q4 547 aa31.23■■■□□ 2.59
HOXA3-205ENST00000522456 CCDC125Q86Z20 511 aa31.23■■■□□ 2.59
HOXA3-205ENST00000522456 HIRIP3Q9BW71 556 aaPredicted RBP31.23■■■□□ 2.59
HOXA3-205ENST00000522456 ROCK2O75116 1388 aaKnown RBP31.22■■■□□ 2.59
HOXA3-205ENST00000522456 PLEKHG5O94827 1062 aa31.22■■■□□ 2.59
HOXA3-205ENST00000522456 PMFBP1Q8TBY8 1022 aa31.22■■■□□ 2.59
HOXA3-205ENST00000522456 NWD2Q9ULI1 1742 aa31.21■■■□□ 2.59
HOXA3-205ENST00000522456 TULP4Q9NRJ4 1543 aa31.19■■■□□ 2.58
HOXA3-205ENST00000522456 TRPM3Q9HCF6 1732 aaPredicted RBP31.18■■■□□ 2.58
HOXA3-205ENST00000522456 VPS72Q15906 364 aa31.17■■■□□ 2.58
HOXA3-205ENST00000522456 WASLO00401 505 aaPredicted RBP31.16■■■□□ 2.58
HOXA3-205ENST00000522456 ZRANB1Q9UGI0 708 aa31.15■■■□□ 2.58
HOXA3-205ENST00000522456 SRCAPQ6ZRS2 3230 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms