RNA–Protein interactions for RNA: ENST00000521791.5

PTK2-234, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-234	ENST00000521791	VPS72	Q15906	364 aa		13.93	□□□□□ -0.18
PTK2-234	ENST00000521791	FAM182B	Q5T319	152 aa		13.93	□□□□□ -0.18
PTK2-234	ENST00000521791	APBA3	O96018	575 aa		13.92	□□□□□ -0.18
PTK2-234	ENST00000521791	FAM161A	Q3B820	660 aa		13.92	□□□□□ -0.18
PTK2-234	ENST00000521791	ATP10D	Q9P241	1426 aa		13.91	□□□□□ -0.18
PTK2-234	ENST00000521791	ADGRB3	O60242	1522 aa		13.91	□□□□□ -0.18
PTK2-234	ENST00000521791	PTGER2	P43116	358 aa		13.9	□□□□□ -0.18
PTK2-234	ENST00000521791	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.9	□□□□□ -0.18
PTK2-234	ENST00000521791	TBX22	Q9Y458	520 aa		13.9	□□□□□ -0.18
PTK2-234	ENST00000521791	PLEKHG1	Q9ULL1	1385 aa		13.9	□□□□□ -0.18
PTK2-234	ENST00000521791	RPRD2	Q5VT52	1461 aa	Known RBP	13.9	□□□□□ -0.18
PTK2-234	ENST00000521791	LRRIQ1	Q96JM4	1722 aa		13.9	□□□□□ -0.18
PTK2-234	ENST00000521791	JMY	Q8N9B5	988 aa		13.89	□□□□□ -0.19
PTK2-234	ENST00000521791	CEP152	O94986	1710 aa		13.89	□□□□□ -0.19
PTK2-234	ENST00000521791	TRIM37	O94972	964 aa		13.88	□□□□□ -0.19
PTK2-234	ENST00000521791	POTED	Q86YR6	584 aa		13.88	□□□□□ -0.19
PTK2-234	ENST00000521791	CASZ1	Q86V15	1759 aa		13.88	□□□□□ -0.19
PTK2-234	ENST00000521791	ZBTB7A	O95365	584 aa		13.87	□□□□□ -0.19
PTK2-234	ENST00000521791	TMEM131L	A2VDJ0	1609 aa		13.86	□□□□□ -0.19
PTK2-234	ENST00000521791	KLRG1	Q96E93	195 aa		13.85	□□□□□ -0.19
PTK2-234	ENST00000521791	TRPM2	O94759	1503 aa		13.85	□□□□□ -0.19
PTK2-234	ENST00000521791	PIK3R4	Q99570	1358 aa		13.84	□□□□□ -0.19
PTK2-234	ENST00000521791	FAM98C	Q17RN3	349 aa	Known RBP	13.84	□□□□□ -0.19
PTK2-234	ENST00000521791	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.84	□□□□□ -0.19
PTK2-234	ENST00000521791	IDI1	Q13907	227 aa		13.83	□□□□□ -0.2
PTK2-234	ENST00000521791	MBD5	Q9P267	1494 aa		13.82	□□□□□ -0.2
PTK2-234	ENST00000521791	NPM3	O75607	178 aa	Known RBP	13.82	□□□□□ -0.2
PTK2-234	ENST00000521791	PELP1	Q8IZL8	1130 aa	Known RBP	13.82	□□□□□ -0.2
PTK2-234	ENST00000521791	ARHGAP31	Q2M1Z3	1444 aa		13.81	□□□□□ -0.2
PTK2-234	ENST00000521791	RNF216	Q9NWF9	866 aa	Predicted RBP	13.81	□□□□□ -0.2
PTK2-234	ENST00000521791	AMOTL2	Q9Y2J4	779 aa		13.81	□□□□□ -0.2
PTK2-234	ENST00000521791	ADGRL3	Q9HAR2	1447 aa		13.81	□□□□□ -0.2
PTK2-234	ENST00000521791	C1orf167	Q5SNV9	1468 aa		13.8	□□□□□ -0.2
PTK2-234	ENST00000521791	EHBP1L1	Q8N3D4	1523 aa		13.8	□□□□□ -0.2
PTK2-234	ENST00000521791	ZNF526	Q8TF50	670 aa	Predicted RBP	13.8	□□□□□ -0.2
PTK2-234	ENST00000521791	WDR90	Q96KV7	1748 aa		13.8	□□□□□ -0.2
PTK2-234	ENST00000521791	MAP3K5	Q99683	1374 aa		13.8	□□□□□ -0.2
PTK2-234	ENST00000521791	NOS1	P29475	1434 aa		13.8	□□□□□ -0.2
PTK2-234	ENST00000521791	NWD2	Q9ULI1	1742 aa		13.79	□□□□□ -0.2
PTK2-234	ENST00000521791	FAM196A	Q6ZSG2	479 aa		13.79	□□□□□ -0.2
PTK2-234	ENST00000521791	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.79	□□□□□ -0.2
PTK2-234	ENST00000521791	PLCH1	Q4KWH8	1693 aa		13.78	□□□□□ -0.2
PTK2-234	ENST00000521791	ZFYVE9	O95405	1425 aa		13.77	□□□□□ -0.21
PTK2-234	ENST00000521791	HDGF	P51858	240 aa	Known RBP	13.77	□□□□□ -0.21
PTK2-234	ENST00000521791	MTUS2	Q5JR59	1369 aa		13.77	□□□□□ -0.21
PTK2-234	ENST00000521791	CCDC18	Q5T9S5	1454 aa		13.77	□□□□□ -0.21
PTK2-234	ENST00000521791	USP32	Q8NFA0	1604 aa		13.77	□□□□□ -0.21
PTK2-234	ENST00000521791	ORAI2	Q96SN7	254 aa		13.77	□□□□□ -0.21
PTK2-234	ENST00000521791	PTPN23	Q9H3S7	1636 aa		13.77	□□□□□ -0.21
PTK2-234	ENST00000521791	ZNF644	Q9H582	1327 aa	Predicted RBP	13.77	□□□□□ -0.21
PTK2-234	ENST00000521791	ADAMTS13	Q76LX8	1427 aa		13.76	□□□□□ -0.21
PTK2-234	ENST00000521791	CCNB3	Q8WWL7	1395 aa		13.75	□□□□□ -0.21
PTK2-234	ENST00000521791	HOXD11	P31277	338 aa	Predicted RBP	13.75	□□□□□ -0.21
PTK2-234	ENST00000521791	ABCC5	O15440	1437 aa		13.74	□□□□□ -0.21
PTK2-234	ENST00000521791	MLLT1	Q03111	559 aa	Predicted RBP	13.74	□□□□□ -0.21
PTK2-234	ENST00000521791	ARX	Q96QS3	562 aa		13.74	□□□□□ -0.21
PTK2-234	ENST00000521791	CROCC2	H7BZ55	1655 aa		13.74	□□□□□ -0.21
PTK2-234	ENST00000521791	NEXMIF	Q5QGS0	1516 aa		13.74	□□□□□ -0.21
PTK2-234	ENST00000521791	FYCO1	Q9BQS8	1478 aa		13.74	□□□□□ -0.21
PTK2-234	ENST00000521791	PTPRU	Q92729	1446 aa		13.73	□□□□□ -0.21
PTK2-234	ENST00000521791	PCNT	O95613	3336 aa		13.73	□□□□□ -0.21
PTK2-234	ENST00000521791	RIMS2	Q9UQ26	1411 aa		13.73	□□□□□ -0.21
PTK2-234	ENST00000521791	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.72	□□□□□ -0.21
PTK2-234	ENST00000521791	KIF3C	O14782	793 aa		13.72	□□□□□ -0.21
PTK2-234	ENST00000521791	HSPA1A	P0DMV8	641 aa	Known RBP	13.72	□□□□□ -0.21
PTK2-234	ENST00000521791	HSPA1B	P0DMV9	641 aa	Known RBP	13.72	□□□□□ -0.21
PTK2-234	ENST00000521791	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.72	□□□□□ -0.21
PTK2-234	ENST00000521791	CCDC141	Q6ZP82	1450 aa		13.72	□□□□□ -0.21
PTK2-234	ENST00000521791	NPHP3	Q7Z494	1330 aa		13.71	□□□□□ -0.21
PTK2-234	ENST00000521791	GOLGB1	Q14789	3259 aa	Known RBP	13.71	□□□□□ -0.21
PTK2-234	ENST00000521791	NALCN	Q8IZF0	1738 aa		13.71	□□□□□ -0.21
PTK2-234	ENST00000521791	GRIN3B	O60391	1043 aa		13.71	□□□□□ -0.21
PTK2-234	ENST00000521791	SGIP1	Q9BQI5	828 aa		13.71	□□□□□ -0.21
PTK2-234	ENST00000521791	KIAA1210	Q9ULL0	1709 aa		13.7	□□□□□ -0.22
PTK2-234	ENST00000521791	HTRA3	P83110	453 aa		13.7	□□□□□ -0.22
PTK2-234	ENST00000521791	MTFR1L	Q9H019	292 aa		13.7	□□□□□ -0.22
PTK2-234	ENST00000521791	THSD7A	Q9UPZ6	1657 aa		13.69	□□□□□ -0.22
PTK2-234	ENST00000521791	PXDN	Q92626	1479 aa		13.69	□□□□□ -0.22
PTK2-234	ENST00000521791	HAP1	P54257	671 aa	Predicted RBP	13.69	□□□□□ -0.22
PTK2-234	ENST00000521791	XRN1	Q8IZH2	1706 aa	Known RBP	13.69	□□□□□ -0.22
PTK2-234	ENST00000521791	ADCY9	O60503	1353 aa		13.69	□□□□□ -0.22
PTK2-234	ENST00000521791	ADGRL2	O95490	1459 aa		13.68	□□□□□ -0.22
PTK2-234	ENST00000521791	XPC	Q01831	940 aa	Predicted RBP	13.66	□□□□□ -0.22
PTK2-234	ENST00000521791	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
PTK2-234	ENST00000521791	MYO5B	Q9ULV0	1848 aa		13.65	□□□□□ -0.22
PTK2-234	ENST00000521791	TOMM70	O94826	608 aa		13.65	□□□□□ -0.22
PTK2-234	ENST00000521791	KLHL34	Q8N239	644 aa		13.65	□□□□□ -0.22
PTK2-234	ENST00000521791	CSRNP3	Q8WYN3	585 aa		13.65	□□□□□ -0.22
PTK2-234	ENST00000521791	USP19	O94966	1318 aa		13.64	□□□□□ -0.23
PTK2-234	ENST00000521791	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.63	□□□□□ -0.23
PTK2-234	ENST00000521791	SLC52A1	Q9NWF4	448 aa		13.63	□□□□□ -0.23
PTK2-234	ENST00000521791	NRAP	Q86VF7	1730 aa		13.63	□□□□□ -0.23
PTK2-234	ENST00000521791	CHGA	P10645	457 aa	Known RBP	13.62	□□□□□ -0.23
PTK2-234	ENST00000521791	YBX3	P16989	372 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	4e-9	■■□□□ 11.5
PTK2-234	ENST00000521791	RSPH4A	Q5TD94	716 aa		13.62	□□□□□ -0.23
PTK2-234	ENST00000521791	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.6	□□□□□ -0.23
PTK2-234	ENST00000521791	RGPD4	Q7Z3J3	1758 aa		13.6	□□□□□ -0.23
PTK2-234	ENST00000521791	SPATA31A5	Q5VU36	1347 aa		13.6	□□□□□ -0.23
PTK2-234	ENST00000521791	SPATA31A7	Q8IWB4	1347 aa		13.6	□□□□□ -0.23
PTK2-234	ENST00000521791	FOXO3	O43524	673 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms