RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 PIK3C2GO75747 1445 aa15.22■□□□□ 0.03
TRAPPC9-209ENST00000521167 MYOM2P54296 1465 aa15.21■□□□□ 0.03
TRAPPC9-209ENST00000521167 ADGRL3Q9HAR2 1447 aa15.21■□□□□ 0.03
TRAPPC9-209ENST00000521167 C14orf93Q9H972 538 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-209ENST00000521167 NRXN1Q9ULB1 1477 aa15.2■□□□□ 0.02
TRAPPC9-209ENST00000521167 ROBO2Q9HCK4 1378 aa15.2■□□□□ 0.02
TRAPPC9-209ENST00000521167 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
TRAPPC9-209ENST00000521167 LRPPRCP42704 1394 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-209ENST00000521167 ABCC11Q96J66 1382 aa15.19■□□□□ 0.02
TRAPPC9-209ENST00000521167 LAMC1P11047 1609 aa15.18■□□□□ 0.02
TRAPPC9-209ENST00000521167 PHLPP1O60346 1717 aa15.18■□□□□ 0.02
TRAPPC9-209ENST00000521167 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
TRAPPC9-209ENST00000521167 SIRT1Q96EB6 747 aa15.18■□□□□ 0.02
TRAPPC9-209ENST00000521167 TECPR2O15040 1411 aa15.17■□□□□ 0.02
TRAPPC9-209ENST00000521167 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
TRAPPC9-209ENST00000521167 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
TRAPPC9-209ENST00000521167 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
TRAPPC9-209ENST00000521167 DCAF11Q8TEB1 546 aa15.16■□□□□ 0.02
TRAPPC9-209ENST00000521167 STK26Q9P289 416 aa15.16■□□□□ 0.02
TRAPPC9-209ENST00000521167 MST1RQ04912 1400 aa15.16■□□□□ 0.02
TRAPPC9-209ENST00000521167 YTHDC2Q9H6S0 1430 aaKnown RBP15.16■□□□□ 0.02
TRAPPC9-209ENST00000521167 MED1Q15648 1581 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC9-209ENST00000521167 DHX57Q6P158 1386 aaKnown RBP15.15■□□□□ 0.02
TRAPPC9-209ENST00000521167 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC9-209ENST00000521167 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
TRAPPC9-209ENST00000521167 ASXL1Q8IXJ9 1541 aa15.15■□□□□ 0.02
TRAPPC9-209ENST00000521167 AHDC1Q5TGY3 1603 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC9-209ENST00000521167 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
TRAPPC9-209ENST00000521167 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC9-209ENST00000521167 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
TRAPPC9-209ENST00000521167 COL16A1Q07092 1604 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC9-209ENST00000521167 JCADQ9P266 1359 aa15.11■□□□□ 0.01
TRAPPC9-209ENST00000521167 POTEHQ6S545 545 aa15.11■□□□□ 0.01
TRAPPC9-209ENST00000521167 C1orf167Q5SNV9 1468 aa15.11■□□□□ 0.01
TRAPPC9-209ENST00000521167 NHSL1Q5SYE7 1610 aa15.1■□□□□ 0.01
TRAPPC9-209ENST00000521167 CDC42BPGQ6DT37 1551 aa15.09■□□□□ 0.01
TRAPPC9-209ENST00000521167 DLC1Q96QB1 1528 aa15.08■□□□□ 0.01
TRAPPC9-209ENST00000521167 PLEKHH1Q9ULM0 1364 aa15.08■□□□□ 0
TRAPPC9-209ENST00000521167 ADGRB1O14514 1584 aa15.07■□□□□ 0
TRAPPC9-209ENST00000521167 ILDR2Q71H61 639 aa15.07■□□□□ 0
TRAPPC9-209ENST00000521167 LRRC59Q96AG4 307 aaKnown RBP15.07■□□□□ 0
TRAPPC9-209ENST00000521167 SHPRHQ149N8 1683 aa15.06■□□□□ 0
TRAPPC9-209ENST00000521167 KIAA1210Q9ULL0 1709 aa15.06■□□□□ 0
TRAPPC9-209ENST00000521167 ORAI2Q96SN7 254 aa15.06■□□□□ 0
TRAPPC9-209ENST00000521167 SPATA31A6Q5VVP1 1343 aa15.06■□□□□ 0
TRAPPC9-209ENST00000521167 SPDYE2BA6NHP3 402 aa15.05■□□□□ -0
TRAPPC9-209ENST00000521167 SPDYE6P0CI01 402 aa15.05■□□□□ -0
TRAPPC9-209ENST00000521167 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
TRAPPC9-209ENST00000521167 PRAM1Q96QH2 718 aa15.05■□□□□ -0
TRAPPC9-209ENST00000521167 POGKQ9P215 609 aa15.05■□□□□ -0
TRAPPC9-209ENST00000521167 FMN2Q9NZ56 1722 aa15.04■□□□□ -0
TRAPPC9-209ENST00000521167 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
TRAPPC9-209ENST00000521167 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
TRAPPC9-209ENST00000521167 SOS2Q07890 1332 aaPredicted RBP15.02■□□□□ -0
TRAPPC9-209ENST00000521167 DDX17Q92841 729 aaKnown RBP15.02■□□□□ -0
TRAPPC9-209ENST00000521167 SIN3AQ96ST3 1273 aa15.02■□□□□ -0
TRAPPC9-209ENST00000521167 RGPD8O14715 1765 aaPredicted RBP15.02□□□□□ -0.01
TRAPPC9-209ENST00000521167 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC9-209ENST00000521167 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
TRAPPC9-209ENST00000521167 SAFB2Q14151 953 aaKnown RBP eCLIP15□□□□□ -0.01
TRAPPC9-209ENST00000521167 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
TRAPPC9-209ENST00000521167 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
TRAPPC9-209ENST00000521167 NEUROD1Q13562 356 aa14.99□□□□□ -0.01
TRAPPC9-209ENST00000521167 RGS17Q9UGC6 210 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC9-209ENST00000521167 ADGRB2O60241 1585 aa14.98□□□□□ -0.01
TRAPPC9-209ENST00000521167 ARHGEF28Q8N1W1 1705 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-209ENST00000521167 KIF1AQ12756 1690 aa14.98□□□□□ -0.01
TRAPPC9-209ENST00000521167 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
TRAPPC9-209ENST00000521167 PNPLA6Q8IY17 1366 aa14.98□□□□□ -0.01
TRAPPC9-209ENST00000521167 SOCS7O14512 581 aa14.97□□□□□ -0.01
TRAPPC9-209ENST00000521167 FOXO3O43524 673 aa14.97□□□□□ -0.01
TRAPPC9-209ENST00000521167 NBPF1Q3BBV0 1214 aa14.96□□□□□ -0.01
TRAPPC9-209ENST00000521167 MEX3CQ5U5Q3 659 aaKnown RBP14.96□□□□□ -0.01
TRAPPC9-209ENST00000521167 ANKARQ7Z5J8 1434 aa14.96□□□□□ -0.01
TRAPPC9-209ENST00000521167 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
TRAPPC9-209ENST00000521167 EIF3AQ14152 1382 aaKnown RBP14.96□□□□□ -0.02
TRAPPC9-209ENST00000521167 LRP6O75581 1613 aa14.95□□□□□ -0.02
TRAPPC9-209ENST00000521167 MINK1Q8N4C8 1332 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-209ENST00000521167 NUTM2BA6NNL0 878 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-209ENST00000521167 NUTM2EB1AL46 878 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-209ENST00000521167 WASLO00401 505 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-209ENST00000521167 NUTM2AQ8IVF1 878 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-209ENST00000521167 PXDNQ92626 1479 aa14.95□□□□□ -0.02
TRAPPC9-209ENST00000521167 HIRIP3Q9BW71 556 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-209ENST00000521167 USP32Q8NFA0 1604 aa14.92□□□□□ -0.02
TRAPPC9-209ENST00000521167 COL22A1Q8NFW1 1626 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC9-209ENST00000521167 PSME1Q06323 249 aa14.92□□□□□ -0.02
TRAPPC9-209ENST00000521167 ZNF772Q68DY9 489 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC9-209ENST00000521167 POTEAQ6S8J7 498 aa14.92□□□□□ -0.02
TRAPPC9-209ENST00000521167 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
TRAPPC9-209ENST00000521167 TRPM1Q7Z4N2 1603 aa14.91□□□□□ -0.02
TRAPPC9-209ENST00000521167 TULP4Q9NRJ4 1543 aa14.91□□□□□ -0.02
TRAPPC9-209ENST00000521167 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC9-209ENST00000521167 SPATA31A3Q5VYP0 1347 aa14.9□□□□□ -0.02
TRAPPC9-209ENST00000521167 CDK19Q9BWU1 502 aa14.89□□□□□ -0.03
TRAPPC9-209ENST00000521167 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
TRAPPC9-209ENST00000521167 PRR36Q9H6K5 1346 aa14.89□□□□□ -0.03
TRAPPC9-209ENST00000521167 CENPJQ9HC77 1338 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC9-209ENST00000521167 ITSN1Q15811 1721 aa14.89□□□□□ -0.03
TRAPPC9-209ENST00000521167 SBNO1A3KN83 1393 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms