RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 ESCO1Q5FWF5 840 aa24.75■■□□□ 1.55
TRAM1-204ENST00000521049 NPHP3Q7Z494 1330 aa24.75■■□□□ 1.55
TRAM1-204ENST00000521049 ATRNO75882 1429 aa24.71■■□□□ 1.55
TRAM1-204ENST00000521049 FOXD1Q16676 465 aa24.71■■□□□ 1.55
TRAM1-204ENST00000521049 FOXO3O43524 673 aa24.7■■□□□ 1.54
TRAM1-204ENST00000521049 CCDC125Q86Z20 511 aa24.68■■□□□ 1.54
TRAM1-204ENST00000521049 MYOM2P54296 1465 aa24.68■■□□□ 1.54
TRAM1-204ENST00000521049 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
TRAM1-204ENST00000521049 ADGRF5Q8IZF2 1346 aa24.66■■□□□ 1.54
TRAM1-204ENST00000521049 COL22A1Q8NFW1 1626 aaPredicted RBP24.66■■□□□ 1.54
TRAM1-204ENST00000521049 BCL9LQ86UU0 1499 aa24.65■■□□□ 1.54
TRAM1-204ENST00000521049 WAPLQ7Z5K2 1190 aa24.65■■□□□ 1.54
TRAM1-204ENST00000521049 PXDNQ92626 1479 aa24.64■■□□□ 1.54
TRAM1-204ENST00000521049 GJD4Q96KN9 370 aaPredicted RBP24.64■■□□□ 1.54
TRAM1-204ENST00000521049 STK26Q9P289 416 aa24.64■■□□□ 1.54
TRAM1-204ENST00000521049 ZRANB1Q9UGI0 708 aa24.64■■□□□ 1.54
TRAM1-204ENST00000521049 CDC42BPGQ6DT37 1551 aa24.63■■□□□ 1.53
TRAM1-204ENST00000521049 XPCQ01831 940 aaPredicted RBP24.63■■□□□ 1.53
TRAM1-204ENST00000521049 ABCC11Q96J66 1382 aa24.63■■□□□ 1.53
TRAM1-204ENST00000521049 TECPR2O15040 1411 aa24.62■■□□□ 1.53
TRAM1-204ENST00000521049 RGL3Q3MIN7 710 aa24.62■■□□□ 1.53
TRAM1-204ENST00000521049 NUTM2FA1L443 756 aa24.61■■□□□ 1.53
TRAM1-204ENST00000521049 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
TRAM1-204ENST00000521049 PPLO60437 1756 aa24.61■■□□□ 1.53
TRAM1-204ENST00000521049 CCDC144AA2RUR9 1427 aa24.59■■□□□ 1.53
TRAM1-204ENST00000521049 TMEM132EQ6IEE7 984 aa24.58■■□□□ 1.53
TRAM1-204ENST00000521049 UNC5CLQ8IV45 518 aa24.58■■□□□ 1.53
TRAM1-204ENST00000521049 SIRT1Q96EB6 747 aa24.58■■□□□ 1.53
TRAM1-204ENST00000521049 SPATA31A3Q5VYP0 1347 aa24.58■■□□□ 1.52
TRAM1-204ENST00000521049 SPATA31E1Q6ZUB1 1445 aa24.57■■□□□ 1.52
TRAM1-204ENST00000521049 KRT28Q7Z3Y7 464 aa24.55■■□□□ 1.52
TRAM1-204ENST00000521049 MPHOSPH9Q99550 1183 aa24.55■■□□□ 1.52
TRAM1-204ENST00000521049 PLEKHH1Q9ULM0 1364 aa24.54■■□□□ 1.52
TRAM1-204ENST00000521049 SRCAPQ6ZRS2 3230 aa24.53■■□□□ 1.52
TRAM1-204ENST00000521049 SLIT2O94813 1529 aa24.51■■□□□ 1.51
TRAM1-204ENST00000521049 PSME1Q06323 249 aa24.5■■□□□ 1.51
TRAM1-204ENST00000521049 C14orf93Q9H972 538 aaKnown RBP24.5■■□□□ 1.51
TRAM1-204ENST00000521049 PIK3C2GO75747 1445 aa24.5■■□□□ 1.51
TRAM1-204ENST00000521049 YTHDC2Q9H6S0 1430 aaKnown RBP24.5■■□□□ 1.51
TRAM1-204ENST00000521049 RALGAPBQ86X10 1494 aa24.48■■□□□ 1.51
TRAM1-204ENST00000521049 PHF8Q9UPP1 1060 aa24.48■■□□□ 1.51
TRAM1-204ENST00000521049 BLMP54132 1417 aaPredicted RBP24.45■■□□□ 1.51
TRAM1-204ENST00000521049 MARF1Q9Y4F3 1742 aaKnown RBP24.45■■□□□ 1.5
TRAM1-204ENST00000521049 ONECUT3O60422 494 aaPredicted RBP24.45■■□□□ 1.5
TRAM1-204ENST00000521049 HAP1P54257 671 aaPredicted RBP24.45■■□□□ 1.5
TRAM1-204ENST00000521049 VPS72Q15906 364 aa24.45■■□□□ 1.5
TRAM1-204ENST00000521049 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
TRAM1-204ENST00000521049 SEPT12Q8IYM1 358 aa24.44■■□□□ 1.5
TRAM1-204ENST00000521049 EP400Q96L91 3159 aa24.44■■□□□ 1.5
TRAM1-204ENST00000521049 DHX57Q6P158 1386 aaKnown RBP24.43■■□□□ 1.5
TRAM1-204ENST00000521049 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.42■■□□□ 1.5
TRAM1-204ENST00000521049 CABLES1Q8TDN4 633 aa24.42■■□□□ 1.5
TRAM1-204ENST00000521049 GLI3P10071 1580 aa24.42■■□□□ 1.5
TRAM1-204ENST00000521049 SBNO1A3KN83 1393 aa24.42■■□□□ 1.5
TRAM1-204ENST00000521049 KNDC1Q76NI1 1749 aa24.41■■□□□ 1.5
TRAM1-204ENST00000521049 KIF1AQ12756 1690 aa24.41■■□□□ 1.5
TRAM1-204ENST00000521049 CFAP70Q5T0N1 1121 aa24.41■■□□□ 1.5
TRAM1-204ENST00000521049 TNS3Q68CZ2 1445 aa24.41■■□□□ 1.5
TRAM1-204ENST00000521049 FMN2Q9NZ56 1722 aa24.41■■□□□ 1.5
TRAM1-204ENST00000521049 SF3B2Q13435 895 aaKnown RBP24.4■■□□□ 1.5
TRAM1-204ENST00000521049 IFT172Q9UG01 1749 aa24.38■■□□□ 1.49
TRAM1-204ENST00000521049 DEFB132Q7Z7B7 95 aa24.38■■□□□ 1.49
TRAM1-204ENST00000521049 PRAM1Q96QH2 718 aa24.38■■□□□ 1.49
TRAM1-204ENST00000521049 ARHGEF10O15013 1369 aa24.38■■□□□ 1.49
TRAM1-204ENST00000521049 USP32Q8NFA0 1604 aa24.37■■□□□ 1.49
TRAM1-204ENST00000521049 LMOD2Q6P5Q4 547 aa24.37■■□□□ 1.49
TRAM1-204ENST00000521049 FAM83GA6ND36 823 aa24.36■■□□□ 1.49
TRAM1-204ENST00000521049 KRT27Q7Z3Y8 459 aa24.36■■□□□ 1.49
TRAM1-204ENST00000521049 CCDC9Q9Y3X0 531 aaKnown RBP24.36■■□□□ 1.49
TRAM1-204ENST00000521049 NRXN1Q9ULB1 1477 aa24.36■■□□□ 1.49
TRAM1-204ENST00000521049 SAFB2Q14151 953 aaKnown RBP eCLIP24.35■■□□□ 1.49
TRAM1-204ENST00000521049 POGKQ9P215 609 aa24.35■■□□□ 1.49
TRAM1-204ENST00000521049 PLEKHG5O94827 1062 aa24.34■■□□□ 1.49
TRAM1-204ENST00000521049 PMFBP1Q8TBY8 1022 aa24.33■■□□□ 1.49
TRAM1-204ENST00000521049 ANKARQ7Z5J8 1434 aa24.31■■□□□ 1.48
TRAM1-204ENST00000521049 DLC1Q96QB1 1528 aa24.27■■□□□ 1.48
TRAM1-204ENST00000521049 BTG4Q9NY30 223 aa24.27■■□□□ 1.48
TRAM1-204ENST00000521049 BAG6P46379 1132 aa24.26■■□□□ 1.47
TRAM1-204ENST00000521049 NWD2Q9ULI1 1742 aa24.26■■□□□ 1.47
TRAM1-204ENST00000521049 GPRASP1Q5JY77 1395 aa24.26■■□□□ 1.47
TRAM1-204ENST00000521049 FAM98CQ17RN3 349 aaKnown RBP24.25■■□□□ 1.47
TRAM1-204ENST00000521049 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
TRAM1-204ENST00000521049 BRWD3Q6RI45 1802 aa24.24■■□□□ 1.47
TRAM1-204ENST00000521049 A0A0G2JS52 829 aa24.24■■□□□ 1.47
TRAM1-204ENST00000521049 MYT1Q01538 1121 aa24.24■■□□□ 1.47
TRAM1-204ENST00000521049 TRAK1Q9UPV9 953 aa24.24■■□□□ 1.47
TRAM1-204ENST00000521049 HIRIP3Q9BW71 556 aaPredicted RBP24.23■■□□□ 1.47
TRAM1-204ENST00000521049 EIF3AQ14152 1382 aaKnown RBP24.22■■□□□ 1.47
TRAM1-204ENST00000521049 WASLO00401 505 aaPredicted RBP24.21■■□□□ 1.47
TRAM1-204ENST00000521049 PLCH1Q4KWH8 1693 aa24.21■■□□□ 1.47
TRAM1-204ENST00000521049 MINK1Q8N4C8 1332 aaPredicted RBP24.2■■□□□ 1.46
TRAM1-204ENST00000521049 PRR36Q9H6K5 1346 aa24.2■■□□□ 1.46
TRAM1-204ENST00000521049 STAC3Q96MF2 364 aa24.2■■□□□ 1.46
TRAM1-204ENST00000521049 SPATA31A5Q5VU36 1347 aa24.18■■□□□ 1.46
TRAM1-204ENST00000521049 SPATA31A7Q8IWB4 1347 aa24.18■■□□□ 1.46
TRAM1-204ENST00000521049 ADGRB1O14514 1584 aa24.18■■□□□ 1.46
TRAM1-204ENST00000521049 ADGRB2O60241 1585 aa24.18■■□□□ 1.46
TRAM1-204ENST00000521049 NGDNQ8NEJ9 315 aaKnown RBP24.18■■□□□ 1.46
TRAM1-204ENST00000521049 HRCP23327 699 aa24.16■■□□□ 1.46
TRAM1-204ENST00000521049 KDM2AQ9Y2K7 1162 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms