RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 PRAM1Q96QH2 718 aa11.08□□□□□ -0.64
IGHV7-40-201ENST00000520963 STK26Q9P289 416 aa11.08□□□□□ -0.64
IGHV7-40-201ENST00000520963 CHD2O14647 1828 aaKnown RBP11.07□□□□□ -0.64
IGHV7-40-201ENST00000520963 QRICH2Q9H0J4 1663 aa11.07□□□□□ -0.64
IGHV7-40-201ENST00000520963 PLEKHH1Q9ULM0 1364 aa11.06□□□□□ -0.64
IGHV7-40-201ENST00000520963 ADGRB2O60241 1585 aa11.06□□□□□ -0.64
IGHV7-40-201ENST00000520963 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
IGHV7-40-201ENST00000520963 TULP4Q9NRJ4 1543 aa11.05□□□□□ -0.64
IGHV7-40-201ENST00000520963 WAPLQ7Z5K2 1190 aa11.05□□□□□ -0.64
IGHV7-40-201ENST00000520963 POGKQ9P215 609 aa11.05□□□□□ -0.64
IGHV7-40-201ENST00000520963 DMRT2Q9Y5R5 561 aa11.05□□□□□ -0.64
IGHV7-40-201ENST00000520963 NCOA3Q9Y6Q9 1424 aa11.04□□□□□ -0.64
IGHV7-40-201ENST00000520963 EVC2Q86UK5 1308 aa11.04□□□□□ -0.64
IGHV7-40-201ENST00000520963 NINLQ9Y2I6 1382 aa11.02□□□□□ -0.65
IGHV7-40-201ENST00000520963 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.01□□□□□ -0.65
IGHV7-40-201ENST00000520963 WASLO00401 505 aaPredicted RBP11.01□□□□□ -0.65
IGHV7-40-201ENST00000520963 ATAD2Q6PL18 1390 aa11.01□□□□□ -0.65
IGHV7-40-201ENST00000520963 DDX10Q13206 875 aaKnown RBP11□□□□□ -0.65
IGHV7-40-201ENST00000520963 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
IGHV7-40-201ENST00000520963 ADGRL3Q9HAR2 1447 aa11□□□□□ -0.65
IGHV7-40-201ENST00000520963 SAFB2Q14151 953 aaKnown RBP eCLIP10.99□□□□□ -0.65
IGHV7-40-201ENST00000520963 CDK19Q9BWU1 502 aa10.99□□□□□ -0.65
IGHV7-40-201ENST00000520963 GTF3C3Q9Y5Q9 886 aa10.99□□□□□ -0.65
IGHV7-40-201ENST00000520963 CDC42BPGQ6DT37 1551 aa10.99□□□□□ -0.65
IGHV7-40-201ENST00000520963 PER1O15534 1290 aaPredicted RBP10.97□□□□□ -0.65
IGHV7-40-201ENST00000520963 ANKARQ7Z5J8 1434 aa10.97□□□□□ -0.65
IGHV7-40-201ENST00000520963 MYOM1P52179 1685 aa10.97□□□□□ -0.65
IGHV7-40-201ENST00000520963 STRCP1A6NGW2 1772 aa10.97□□□□□ -0.65
IGHV7-40-201ENST00000520963 ATP7BP35670 1465 aa10.96□□□□□ -0.65
IGHV7-40-201ENST00000520963 DCCP43146 1447 aa10.96□□□□□ -0.65
IGHV7-40-201ENST00000520963 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
IGHV7-40-201ENST00000520963 CABP2Q9NPB3 220 aa10.96□□□□□ -0.65
IGHV7-40-201ENST00000520963 TMEM94Q12767 1356 aa10.95□□□□□ -0.66
IGHV7-40-201ENST00000520963 PRR36Q9H6K5 1346 aa10.95□□□□□ -0.66
IGHV7-40-201ENST00000520963 SRPK2P78362 688 aaKnown RBP10.95□□□□□ -0.66
IGHV7-40-201ENST00000520963 PROSER2Q86WR7 435 aaPredicted RBP10.95□□□□□ -0.66
IGHV7-40-201ENST00000520963 CCDC61Q9Y6R9 512 aa10.95□□□□□ -0.66
IGHV7-40-201ENST00000520963 NALCNQ8IZF0 1738 aa10.95□□□□□ -0.66
IGHV7-40-201ENST00000520963 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
IGHV7-40-201ENST00000520963 ANKRD36BQ8N2N9 1353 aa10.94□□□□□ -0.66
IGHV7-40-201ENST00000520963 NPC1L1Q9UHC9 1359 aa10.94□□□□□ -0.66
IGHV7-40-201ENST00000520963 ZNF335Q9H4Z2 1342 aaPredicted RBP10.94□□□□□ -0.66
IGHV7-40-201ENST00000520963 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
IGHV7-40-201ENST00000520963 NUDT16Q96DE0 195 aaKnown RBP10.94□□□□□ -0.66
IGHV7-40-201ENST00000520963 C19orf44Q9H6X5 657 aa10.94□□□□□ -0.66
IGHV7-40-201ENST00000520963 PANK3Q9H999 370 aa10.94□□□□□ -0.66
IGHV7-40-201ENST00000520963 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
IGHV7-40-201ENST00000520963 FMN2Q9NZ56 1722 aa10.93□□□□□ -0.66
IGHV7-40-201ENST00000520963 POLR3GLQ9BT43 218 aa10.93□□□□□ -0.66
IGHV7-40-201ENST00000520963 SLC12A5Q9H2X9 1139 aa10.93□□□□□ -0.66
IGHV7-40-201ENST00000520963 CPSF1Q10570 1443 aaKnown RBP10.92□□□□□ -0.66
IGHV7-40-201ENST00000520963 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
IGHV7-40-201ENST00000520963 USP32Q8NFA0 1604 aa10.92□□□□□ -0.66
IGHV7-40-201ENST00000520963 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
IGHV7-40-201ENST00000520963 LTBP4Q8N2S1 1624 aa10.91□□□□□ -0.66
IGHV7-40-201ENST00000520963 TERF2IPQ9NYB0 399 aa10.91□□□□□ -0.66
IGHV7-40-201ENST00000520963 CABP1Q9NZU7 370 aa10.91□□□□□ -0.66
IGHV7-40-201ENST00000520963 PPIP5K1Q6PFW1 1433 aa10.91□□□□□ -0.66
IGHV7-40-201ENST00000520963 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
IGHV7-40-201ENST00000520963 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.66
IGHV7-40-201ENST00000520963 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
IGHV7-40-201ENST00000520963 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
IGHV7-40-201ENST00000520963 CARD14Q9BXL6 1004 aa10.9□□□□□ -0.66
IGHV7-40-201ENST00000520963 XIRP1Q702N8 1843 aaKnown RBP10.89□□□□□ -0.67
IGHV7-40-201ENST00000520963 CADPS2Q86UW7 1296 aa10.89□□□□□ -0.67
IGHV7-40-201ENST00000520963 TMC1Q8TDI8 760 aa10.89□□□□□ -0.67
IGHV7-40-201ENST00000520963 ITSN1Q15811 1721 aa10.89□□□□□ -0.67
IGHV7-40-201ENST00000520963 BRD4O60885 1362 aaPredicted RBP10.89□□□□□ -0.67
IGHV7-40-201ENST00000520963 MSH6P52701 1360 aa10.89□□□□□ -0.67
IGHV7-40-201ENST00000520963 MST1RQ04912 1400 aa10.88□□□□□ -0.67
IGHV7-40-201ENST00000520963 SSH2Q76I76 1423 aa10.88□□□□□ -0.67
IGHV7-40-201ENST00000520963 HDGFL2Q7Z4V5 671 aaPredicted RBP10.88□□□□□ -0.67
IGHV7-40-201ENST00000520963 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
IGHV7-40-201ENST00000520963 YTHDC1Q96MU7 727 aaKnown RBP10.88□□□□□ -0.67
IGHV7-40-201ENST00000520963 PRKRIP1Q9H875 184 aaPredicted RBP10.88□□□□□ -0.67
IGHV7-40-201ENST00000520963 KNSTRNQ9Y448 316 aa10.88□□□□□ -0.67
IGHV7-40-201ENST00000520963 NSD2O96028 1365 aa10.88□□□□□ -0.67
IGHV7-40-201ENST00000520963 C1orf167Q5SNV9 1468 aa10.87□□□□□ -0.67
IGHV7-40-201ENST00000520963 EDC4Q6P2E9 1401 aaKnown RBP10.87□□□□□ -0.67
IGHV7-40-201ENST00000520963 ANP32CO43423 234 aa10.87□□□□□ -0.67
IGHV7-40-201ENST00000520963 RALBP1Q15311 655 aa10.87□□□□□ -0.67
IGHV7-40-201ENST00000520963 C14orf37Q86TY3 774 aa10.87□□□□□ -0.67
IGHV7-40-201ENST00000520963 PARD3Q8TEW0 1356 aa10.87□□□□□ -0.67
IGHV7-40-201ENST00000520963 NSD3Q9BZ95 1437 aa10.86□□□□□ -0.67
IGHV7-40-201ENST00000520963 ATF3P18847 181 aa10.86□□□□□ -0.67
IGHV7-40-201ENST00000520963 ACEP12821 1306 aa10.85□□□□□ -0.67
IGHV7-40-201ENST00000520963 CGNL1Q0VF96 1302 aa10.85□□□□□ -0.67
IGHV7-40-201ENST00000520963 AKAP12Q02952 1782 aa10.85□□□□□ -0.67
IGHV7-40-201ENST00000520963 USP6P35125 1406 aa10.85□□□□□ -0.67
IGHV7-40-201ENST00000520963 MON2Q7Z3U7 1717 aa10.85□□□□□ -0.67
IGHV7-40-201ENST00000520963 PHF8Q9UPP1 1060 aa10.85□□□□□ -0.67
IGHV7-40-201ENST00000520963 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
IGHV7-40-201ENST00000520963 IQSEC2Q5JU85 1478 aa10.84□□□□□ -0.67
IGHV7-40-201ENST00000520963 KIF1AQ12756 1690 aa10.83□□□□□ -0.68
IGHV7-40-201ENST00000520963 NRKQ7Z2Y5 1582 aa10.83□□□□□ -0.68
IGHV7-40-201ENST00000520963 NUTM2FA1L443 756 aa10.83□□□□□ -0.68
IGHV7-40-201ENST00000520963 TTC21AQ8NDW8 1320 aa10.83□□□□□ -0.68
IGHV7-40-201ENST00000520963 RGPD8O14715 1765 aaPredicted RBP10.82□□□□□ -0.68
IGHV7-40-201ENST00000520963 FYB1O15117 783 aa10.82□□□□□ -0.68
IGHV7-40-201ENST00000520963 TTC21BQ7Z4L5 1316 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms