RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 PLEKHH1Q9ULM0 1364 aa22.11■■□□□ 1.13
HDAC2-209ENST00000520895 TRPM1Q7Z4N2 1603 aa22.1■■□□□ 1.13
HDAC2-209ENST00000520895 NBPF1Q3BBV0 1214 aa22.1■■□□□ 1.13
HDAC2-209ENST00000520895 HSPA1LP34931 641 aa22.09■■□□□ 1.13
HDAC2-209ENST00000520895 ROBO1Q9Y6N7 1651 aa22.09■■□□□ 1.13
HDAC2-209ENST00000520895 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.13
HDAC2-209ENST00000520895 ARHGEF28Q8N1W1 1705 aaKnown RBP22.06■■□□□ 1.12
HDAC2-209ENST00000520895 CDC42BPGQ6DT37 1551 aa22.06■■□□□ 1.12
HDAC2-209ENST00000520895 ROCK2O75116 1388 aaKnown RBP22.05■■□□□ 1.12
HDAC2-209ENST00000520895 NBPF8Q3BBV2 869 aa22.05■■□□□ 1.12
HDAC2-209ENST00000520895 MST1RQ04912 1400 aa22.05■■□□□ 1.12
HDAC2-209ENST00000520895 TIMELESSQ9UNS1 1208 aa22.03■■□□□ 1.12
HDAC2-209ENST00000520895 MINK1Q8N4C8 1332 aaPredicted RBP22■■□□□ 1.11
HDAC2-209ENST00000520895 C1orf167Q5SNV9 1468 aa21.99■■□□□ 1.11
HDAC2-209ENST00000520895 FMN2Q9NZ56 1722 aa21.99■■□□□ 1.11
HDAC2-209ENST00000520895 RALGAPBQ86X10 1494 aa21.98■■□□□ 1.11
HDAC2-209ENST00000520895 NUTM2FA1L443 756 aa21.98■■□□□ 1.11
HDAC2-209ENST00000520895 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
HDAC2-209ENST00000520895 HIRIP3Q9BW71 556 aaPredicted RBP21.98■■□□□ 1.11
HDAC2-209ENST00000520895 ADGRB2O60241 1585 aa21.97■■□□□ 1.11
HDAC2-209ENST00000520895 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
HDAC2-209ENST00000520895 CARD11Q9BXL7 1154 aa21.96■■□□□ 1.11
HDAC2-209ENST00000520895 CENPJQ9HC77 1338 aaPredicted RBP21.95■■□□□ 1.1
HDAC2-209ENST00000520895 GPRASP1Q5JY77 1395 aa21.95■■□□□ 1.1
HDAC2-209ENST00000520895 ESCO1Q5FWF5 840 aa21.94■■□□□ 1.1
HDAC2-209ENST00000520895 ORAI2Q96SN7 254 aa21.94■■□□□ 1.1
HDAC2-209ENST00000520895 EIF3AQ14152 1382 aaKnown RBP21.94■■□□□ 1.1
HDAC2-209ENST00000520895 AHDC1Q5TGY3 1603 aaPredicted RBP21.94■■□□□ 1.1
HDAC2-209ENST00000520895 COL16A1Q07092 1604 aaPredicted RBP21.93■■□□□ 1.1
HDAC2-209ENST00000520895 QRICH2Q9H0J4 1663 aa21.93■■□□□ 1.1
HDAC2-209ENST00000520895 RGPD8O14715 1765 aaPredicted RBP21.92■■□□□ 1.1
HDAC2-209ENST00000520895 WASLO00401 505 aaPredicted RBP21.91■■□□□ 1.1
HDAC2-209ENST00000520895 NHSL1Q5SYE7 1610 aa21.91■■□□□ 1.1
HDAC2-209ENST00000520895 ANKARQ7Z5J8 1434 aa21.89■■□□□ 1.09
HDAC2-209ENST00000520895 MED1Q15648 1581 aaPredicted RBP21.88■■□□□ 1.09
HDAC2-209ENST00000520895 KIF1AQ12756 1690 aa21.87■■□□□ 1.09
HDAC2-209ENST00000520895 TULP4Q9NRJ4 1543 aa21.86■■□□□ 1.09
HDAC2-209ENST00000520895 DDX17Q92841 729 aaKnown RBP21.86■■□□□ 1.09
HDAC2-209ENST00000520895 CDK19Q9BWU1 502 aa21.86■■□□□ 1.09
HDAC2-209ENST00000520895 USP32Q8NFA0 1604 aa21.86■■□□□ 1.09
HDAC2-209ENST00000520895 PHF8Q9UPP1 1060 aa21.84■■□□□ 1.09
HDAC2-209ENST00000520895 NPHP3Q7Z494 1330 aa21.83■■□□□ 1.09
HDAC2-209ENST00000520895 FOXO3O43524 673 aa21.83■■□□□ 1.09
HDAC2-209ENST00000520895 SRPK2P78362 688 aaKnown RBP21.83■■□□□ 1.09
HDAC2-209ENST00000520895 ITSN1Q15811 1721 aa21.83■■□□□ 1.08
HDAC2-209ENST00000520895 PRR36Q9H6K5 1346 aa21.81■■□□□ 1.08
HDAC2-209ENST00000520895 NUDT16Q96DE0 195 aaKnown RBP21.81■■□□□ 1.08
HDAC2-209ENST00000520895 JCADQ9P266 1359 aa21.81■■□□□ 1.08
HDAC2-209ENST00000520895 SHPRHQ149N8 1683 aa21.81■■□□□ 1.08
HDAC2-209ENST00000520895 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
HDAC2-209ENST00000520895 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
HDAC2-209ENST00000520895 LRRC59Q96AG4 307 aaKnown RBP21.8■■□□□ 1.08
HDAC2-209ENST00000520895 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
HDAC2-209ENST00000520895 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
HDAC2-209ENST00000520895 ATP7BP35670 1465 aa21.78■■□□□ 1.08
HDAC2-209ENST00000520895 XPCQ01831 940 aaPredicted RBP21.78■■□□□ 1.08
HDAC2-209ENST00000520895 CABP2Q9NPB3 220 aa21.78■■□□□ 1.08
HDAC2-209ENST00000520895 USP47Q96K76 1375 aa21.76■■□□□ 1.07
HDAC2-209ENST00000520895 PSME1Q06323 249 aa21.76■■□□□ 1.07
HDAC2-209ENST00000520895 CCDC61Q9Y6R9 512 aa21.76■■□□□ 1.07
HDAC2-209ENST00000520895 PXDNQ92626 1479 aa21.76■■□□□ 1.07
HDAC2-209ENST00000520895 SBNO2Q9Y2G9 1366 aa21.75■■□□□ 1.07
HDAC2-209ENST00000520895 ST20-MTHFSA0A0A6YYL1 179 aa21.75■■□□□ 1.07
HDAC2-209ENST00000520895 KRT28Q7Z3Y7 464 aa21.75■■□□□ 1.07
HDAC2-209ENST00000520895 NGDNQ8NEJ9 315 aaKnown RBP21.75■■□□□ 1.07
HDAC2-209ENST00000520895 TOPAZ1Q8N9V7 1692 aa21.75■■□□□ 1.07
HDAC2-209ENST00000520895 SPATA31A6Q5VVP1 1343 aa21.72■■□□□ 1.07
HDAC2-209ENST00000520895 SLC24A1O60721 1099 aa21.71■■□□□ 1.07
HDAC2-209ENST00000520895 PPIP5K1Q6PFW1 1433 aa21.71■■□□□ 1.07
HDAC2-209ENST00000520895 PNPLA6Q8IY17 1366 aa21.7■■□□□ 1.06
HDAC2-209ENST00000520895 LRP6O75581 1613 aa21.69■■□□□ 1.06
HDAC2-209ENST00000520895 PLEKHG3A1L390 1219 aa21.68■■□□□ 1.06
HDAC2-209ENST00000520895 NUTM2BA6NNL0 878 aaPredicted RBP21.68■■□□□ 1.06
HDAC2-209ENST00000520895 NUTM2EB1AL46 878 aaPredicted RBP21.68■■□□□ 1.06
HDAC2-209ENST00000520895 NUTM2AQ8IVF1 878 aaPredicted RBP21.68■■□□□ 1.06
HDAC2-209ENST00000520895 TESK2Q96S53 571 aa21.68■■□□□ 1.06
HDAC2-209ENST00000520895 ACEP12821 1306 aa21.68■■□□□ 1.06
HDAC2-209ENST00000520895 ATAD2Q6PL18 1390 aa21.67■■□□□ 1.06
HDAC2-209ENST00000520895 SPATA31A3Q5VYP0 1347 aa21.67■■□□□ 1.06
HDAC2-209ENST00000520895 CABP1Q9NZU7 370 aa21.67■■□□□ 1.06
HDAC2-209ENST00000520895 SBNO1A3KN83 1393 aa21.66■■□□□ 1.06
HDAC2-209ENST00000520895 LMOD2Q6P5Q4 547 aa21.66■■□□□ 1.06
HDAC2-209ENST00000520895 ILDR2Q71H61 639 aa21.66■■□□□ 1.06
HDAC2-209ENST00000520895 COL22A1Q8NFW1 1626 aaPredicted RBP21.66■■□□□ 1.06
HDAC2-209ENST00000520895 TNS3Q68CZ2 1445 aa21.65■■□□□ 1.06
HDAC2-209ENST00000520895 POLR3AO14802 1390 aaPredicted RBP21.65■■□□□ 1.06
HDAC2-209ENST00000520895 PAK3O75914 559 aaPredicted RBP21.65■■□□□ 1.06
HDAC2-209ENST00000520895 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
HDAC2-209ENST00000520895 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
HDAC2-209ENST00000520895 TRPM3Q9HCF6 1732 aaPredicted RBP21.64■■□□□ 1.06
HDAC2-209ENST00000520895 EIF4G2P78344 907 aaKnown RBP eCLIP21.64■■□□□ 1.05
HDAC2-209ENST00000520895 TMF1P82094 1093 aa21.64■■□□□ 1.05
HDAC2-209ENST00000520895 RGS17Q9UGC6 210 aaPredicted RBP21.64■■□□□ 1.05
HDAC2-209ENST00000520895 ARHGEF10O15013 1369 aa21.61■■□□□ 1.05
HDAC2-209ENST00000520895 TMC1Q8TDI8 760 aa21.61■■□□□ 1.05
HDAC2-209ENST00000520895 PUS7Q96PZ0 661 aaKnown RBP21.61■■□□□ 1.05
HDAC2-209ENST00000520895 ALS2Q96Q42 1657 aa21.6■■□□□ 1.05
HDAC2-209ENST00000520895 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
HDAC2-209ENST00000520895 CDCA8Q53HL2 280 aa21.59■■□□□ 1.05
HDAC2-209ENST00000520895 HSPA5P11021 654 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms