RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 WWC1Q8IX03 1113 aa14.69□□□□□ -0.06
CLK4-206ENST00000520878 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
CLK4-206ENST00000520878 MADDQ8WXG6 1647 aa14.69□□□□□ -0.06
CLK4-206ENST00000520878 FTSJ3Q8IY81 847 aaKnown RBP14.69□□□□□ -0.06
CLK4-206ENST00000520878 ZBTB7CA1YPR0 619 aa14.68□□□□□ -0.06
CLK4-206ENST00000520878 PANK1Q8TE04 598 aa14.68□□□□□ -0.06
CLK4-206ENST00000520878 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
CLK4-206ENST00000520878 TSPOAP1O95153 1857 aa14.68□□□□□ -0.06
CLK4-206ENST00000520878 DIAPH1O60610 1272 aaKnown RBP14.68□□□□□ -0.06
CLK4-206ENST00000520878 EID1Q9Y6B2 187 aa14.68□□□□□ -0.06
CLK4-206ENST00000520878 RNF17Q9BXT8 1623 aaKnown RBP14.68□□□□□ -0.06
CLK4-206ENST00000520878 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
CLK4-206ENST00000520878 ABCC3O15438 1527 aa14.67□□□□□ -0.06
CLK4-206ENST00000520878 CEP152O94986 1710 aa14.67□□□□□ -0.06
CLK4-206ENST00000520878 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
CLK4-206ENST00000520878 TSR2Q969E8 191 aaKnown RBP14.66□□□□□ -0.06
CLK4-206ENST00000520878 PPRC1Q5VV67 1664 aaKnown RBP14.66□□□□□ -0.06
CLK4-206ENST00000520878 ELL2O00472 640 aaPredicted RBP14.66□□□□□ -0.06
CLK4-206ENST00000520878 RIPK4P57078 832 aa14.66□□□□□ -0.06
CLK4-206ENST00000520878 MYH16Q9H6N6 1097 aa14.66□□□□□ -0.06
CLK4-206ENST00000520878 POLR1AO95602 1720 aaPredicted RBP14.65□□□□□ -0.06
CLK4-206ENST00000520878 FYB1O15117 783 aa14.65□□□□□ -0.06
CLK4-206ENST00000520878 KIF1BO60333 1816 aa14.65□□□□□ -0.06
CLK4-206ENST00000520878 MYOM2P54296 1465 aa14.65□□□□□ -0.06
CLK4-206ENST00000520878 PIK3C2GO75747 1445 aa14.65□□□□□ -0.07
CLK4-206ENST00000520878 TCERG1O14776 1098 aaKnown RBP14.64□□□□□ -0.07
CLK4-206ENST00000520878 MYT1Q01538 1121 aa14.64□□□□□ -0.07
CLK4-206ENST00000520878 RNF123Q5XPI4 1314 aa14.64□□□□□ -0.07
CLK4-206ENST00000520878 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
CLK4-206ENST00000520878 COG3Q96JB2 828 aa14.63□□□□□ -0.07
CLK4-206ENST00000520878 MAP3K4Q9Y6R4 1608 aa14.63□□□□□ -0.07
CLK4-206ENST00000520878 PDE4AP27815 886 aa14.63□□□□□ -0.07
CLK4-206ENST00000520878 ATAD2Q6PL18 1390 aa14.63□□□□□ -0.07
CLK4-206ENST00000520878 CFAP74Q9C0B2 1584 aa14.62□□□□□ -0.07
CLK4-206ENST00000520878 RRS1Q15050 365 aaKnown RBP14.62□□□□□ -0.07
CLK4-206ENST00000520878 NME9Q86XW9 330 aa14.62□□□□□ -0.07
CLK4-206ENST00000520878 NGDNQ8NEJ9 315 aaKnown RBP14.62□□□□□ -0.07
CLK4-206ENST00000520878 PMFBP1Q8TBY8 1022 aa14.62□□□□□ -0.07
CLK4-206ENST00000520878 A0A1W2PP64 1363 aa14.62□□□□□ -0.07
CLK4-206ENST00000520878 NUDT16Q96DE0 195 aaKnown RBP14.62□□□□□ -0.07
CLK4-206ENST00000520878 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
CLK4-206ENST00000520878 ZMYM3Q14202 1370 aa14.61□□□□□ -0.07
CLK4-206ENST00000520878 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
CLK4-206ENST00000520878 ANKRD36BQ8N2N9 1353 aa14.61□□□□□ -0.07
CLK4-206ENST00000520878 MSH5O43196 834 aa14.61□□□□□ -0.07
CLK4-206ENST00000520878 PNNQ9H307 717 aaKnown RBP14.61□□□□□ -0.07
CLK4-206ENST00000520878 YTHDC2Q9H6S0 1430 aaKnown RBP14.6□□□□□ -0.07
CLK4-206ENST00000520878 PRKAR2BP31323 418 aa14.6□□□□□ -0.07
CLK4-206ENST00000520878 NOP58Q9Y2X3 529 aaKnown RBP14.6□□□□□ -0.07
CLK4-206ENST00000520878 ABCA6Q8N139 1617 aa14.6□□□□□ -0.07
CLK4-206ENST00000520878 NPC1L1Q9UHC9 1359 aa14.6□□□□□ -0.07
CLK4-206ENST00000520878 BLMP54132 1417 aaPredicted RBP14.6□□□□□ -0.07
CLK4-206ENST00000520878 RIMS2Q9UQ26 1411 aa14.6□□□□□ -0.07
CLK4-206ENST00000520878 LMOD2Q6P5Q4 547 aa14.59□□□□□ -0.07
CLK4-206ENST00000520878 EMILIN1Q9Y6C2 1016 aa14.59□□□□□ -0.07
CLK4-206ENST00000520878 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
CLK4-206ENST00000520878 RTL5Q5HYW3 569 aaPredicted RBP14.59□□□□□ -0.07
CLK4-206ENST00000520878 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
CLK4-206ENST00000520878 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
CLK4-206ENST00000520878 EXOSC9Q06265 439 aaKnown RBP14.59□□□□□ -0.07
CLK4-206ENST00000520878 FRMPD1Q5SYB0 1578 aa14.59□□□□□ -0.07
CLK4-206ENST00000520878 VWDEQ8N2E2 1590 aa14.59□□□□□ -0.07
CLK4-206ENST00000520878 NUTM2GQ5VZR2 741 aa14.58□□□□□ -0.07
CLK4-206ENST00000520878 NGEFQ8N5V2 710 aa14.58□□□□□ -0.07
CLK4-206ENST00000520878 ITPRIPQ8IWB1 547 aa14.58□□□□□ -0.08
CLK4-206ENST00000520878 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
CLK4-206ENST00000520878 FANCIQ9NVI1 1328 aa14.58□□□□□ -0.08
CLK4-206ENST00000520878 SBNO2Q9Y2G9 1366 aa14.58□□□□□ -0.08
CLK4-206ENST00000520878 RBM33Q96EV2 1170 aaKnown RBP14.58□□□□□ -0.08
CLK4-206ENST00000520878 THUMPD2Q9BTF0 503 aaKnown RBP14.58□□□□□ -0.08
CLK4-206ENST00000520878 DEPDC5O75140 1603 aa14.57□□□□□ -0.08
CLK4-206ENST00000520878 POLR3AO14802 1390 aaPredicted RBP14.57□□□□□ -0.08
CLK4-206ENST00000520878 TMPOP42166 694 aaKnown RBP14.57□□□□□ -0.08
CLK4-206ENST00000520878 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
CLK4-206ENST00000520878 KDM5AP29375 1690 aaKnown RBP14.57□□□□□ -0.08
CLK4-206ENST00000520878 LMTK2Q8IWU2 1503 aa14.56□□□□□ -0.08
CLK4-206ENST00000520878 DIP2CQ9Y2E4 1556 aa14.56□□□□□ -0.08
CLK4-206ENST00000520878 ADGRB3O60242 1522 aa14.56□□□□□ -0.08
CLK4-206ENST00000520878 SYNMO15061 1565 aa14.56□□□□□ -0.08
CLK4-206ENST00000520878 LTV1Q96GA3 475 aaPredicted RBP14.55□□□□□ -0.08
CLK4-206ENST00000520878 TNNQ9UQP3 1299 aa14.55□□□□□ -0.08
CLK4-206ENST00000520878 TNRQ92752 1358 aa14.55□□□□□ -0.08
CLK4-206ENST00000520878 LAMC1P11047 1609 aa14.55□□□□□ -0.08
CLK4-206ENST00000520878 WDR63Q8IWG1 891 aa14.54□□□□□ -0.08
CLK4-206ENST00000520878 NKTRP30414 1462 aaKnown RBP14.53□□□□□ -0.08
CLK4-206ENST00000520878 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
CLK4-206ENST00000520878 ZKSCAN2Q63HK3 967 aa14.53□□□□□ -0.08
CLK4-206ENST00000520878 IPO9Q96P70 1041 aaKnown RBP14.53□□□□□ -0.08
CLK4-206ENST00000520878 ZMYM4Q5VZL5 1548 aa14.53□□□□□ -0.08
CLK4-206ENST00000520878 MROH2AA6NES4 1674 aa14.52□□□□□ -0.09
CLK4-206ENST00000520878 PUS7Q96PZ0 661 aaKnown RBP14.52□□□□□ -0.09
CLK4-206ENST00000520878 ARHGAP31Q2M1Z3 1444 aa14.52□□□□□ -0.09
CLK4-206ENST00000520878 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.09
CLK4-206ENST00000520878 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.09
CLK4-206ENST00000520878 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.09
CLK4-206ENST00000520878 AMPHP49418 695 aa14.52□□□□□ -0.09
CLK4-206ENST00000520878 AMOTL2Q9Y2J4 779 aa14.52□□□□□ -0.09
CLK4-206ENST00000520878 SLC4A3P48751 1232 aa14.51□□□□□ -0.09
CLK4-206ENST00000520878 IQGAP1P46940 1657 aa14.51□□□□□ -0.09
CLK4-206ENST00000520878 ZNF521Q96K83 1311 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms