RNA–Protein interactions for RNA: ENST00000520361.5

TBCA-208, Transcript of tubulin folding cofactor A, human

TSL 2 BASIC

Gene TBCA, Length 446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TBCA-208	ENST00000520361	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.73	□□□□□ -0.21
TBCA-208	ENST00000520361	CFAP70	Q5T0N1	1121 aa		13.73	□□□□□ -0.21
TBCA-208	ENST00000520361	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.72	□□□□□ -0.21
TBCA-208	ENST00000520361	MED1	Q15648	1581 aa	Predicted RBP	13.72	□□□□□ -0.21
TBCA-208	ENST00000520361	TRIM26	Q12899	539 aa	Predicted RBP	13.72	□□□□□ -0.21
TBCA-208	ENST00000520361	STAC3	Q96MF2	364 aa		13.72	□□□□□ -0.21
TBCA-208	ENST00000520361	PHLPP1	O60346	1717 aa		13.72	□□□□□ -0.21
TBCA-208	ENST00000520361	COL16A1	Q07092	1604 aa	Predicted RBP	13.72	□□□□□ -0.21
TBCA-208	ENST00000520361	DCAF11	Q8TEB1	546 aa		13.71	□□□□□ -0.21
TBCA-208	ENST00000520361	CDC42BPG	Q6DT37	1551 aa		13.71	□□□□□ -0.22
TBCA-208	ENST00000520361	BRINP3	Q76B58	766 aa		13.7	□□□□□ -0.22
TBCA-208	ENST00000520361	FOXD4L1	Q9NU39	408 aa		13.7	□□□□□ -0.22
TBCA-208	ENST00000520361	STK26	Q9P289	416 aa		13.7	□□□□□ -0.22
TBCA-208	ENST00000520361	PLEKHH1	Q9ULM0	1364 aa		13.7	□□□□□ -0.22
TBCA-208	ENST00000520361	C1orf167	Q5SNV9	1468 aa		13.69	□□□□□ -0.22
TBCA-208	ENST00000520361	WAPL	Q7Z5K2	1190 aa		13.69	□□□□□ -0.22
TBCA-208	ENST00000520361	SIRT1	Q96EB6	747 aa		13.69	□□□□□ -0.22
TBCA-208	ENST00000520361	KDM2A	Q9Y2K7	1162 aa		13.69	□□□□□ -0.22
TBCA-208	ENST00000520361	DISP3	Q9P2K9	1392 aa		13.69	□□□□□ -0.22
TBCA-208	ENST00000520361	DLC1	Q96QB1	1528 aa		13.69	□□□□□ -0.22
TBCA-208	ENST00000520361	NHSL1	Q5SYE7	1610 aa		13.68	□□□□□ -0.22
TBCA-208	ENST00000520361	KIAA1210	Q9ULL0	1709 aa		13.67	□□□□□ -0.22
TBCA-208	ENST00000520361	SLC4A2	P04920	1241 aa		13.66	□□□□□ -0.22
TBCA-208	ENST00000520361	FMN2	Q9NZ56	1722 aa		13.64	□□□□□ -0.23
TBCA-208	ENST00000520361	SIN3A	Q96ST3	1273 aa		13.64	□□□□□ -0.23
TBCA-208	ENST00000520361	SHPRH	Q149N8	1683 aa		13.63	□□□□□ -0.23
TBCA-208	ENST00000520361	JCAD	Q9P266	1359 aa		13.63	□□□□□ -0.23
TBCA-208	ENST00000520361	ADGRB2	O60241	1585 aa		13.62	□□□□□ -0.23
TBCA-208	ENST00000520361	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.62	□□□□□ -0.23
TBCA-208	ENST00000520361	PRAM1	Q96QH2	718 aa		13.62	□□□□□ -0.23
TBCA-208	ENST00000520361	ORAI2	Q96SN7	254 aa		13.62	□□□□□ -0.23
TBCA-208	ENST00000520361	ILDR2	Q71H61	639 aa		13.61	□□□□□ -0.23
TBCA-208	ENST00000520361	DDX17	Q92841	729 aa	Known RBP	13.61	□□□□□ -0.23
TBCA-208	ENST00000520361	L3MBTL2	Q969R5	705 aa		13.61	□□□□□ -0.23
TBCA-208	ENST00000520361	TRAK1	Q9UPV9	953 aa		13.6	□□□□□ -0.23
TBCA-208	ENST00000520361	RGPD8	O14715	1765 aa	Predicted RBP	13.59	□□□□□ -0.23
TBCA-208	ENST00000520361	LRP6	O75581	1613 aa		13.58	□□□□□ -0.24
TBCA-208	ENST00000520361	USP32	Q8NFA0	1604 aa		13.58	□□□□□ -0.24
TBCA-208	ENST00000520361	NBPF1	Q3BBV0	1214 aa		13.58	□□□□□ -0.24
TBCA-208	ENST00000520361	SOS2	Q07890	1332 aa	Predicted RBP	13.58	□□□□□ -0.24
TBCA-208	ENST00000520361	PXDN	Q92626	1479 aa		13.57	□□□□□ -0.24
TBCA-208	ENST00000520361	NEUROD1	Q13562	356 aa		13.57	□□□□□ -0.24
TBCA-208	ENST00000520361	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
TBCA-208	ENST00000520361	RGS17	Q9UGC6	210 aa	Predicted RBP	13.57	□□□□□ -0.24
TBCA-208	ENST00000520361	SPATA31A6	Q5VVP1	1343 aa		13.57	□□□□□ -0.24
TBCA-208	ENST00000520361	TRPM1	Q7Z4N2	1603 aa		13.57	□□□□□ -0.24
TBCA-208	ENST00000520361	POGK	Q9P215	609 aa		13.56	□□□□□ -0.24
TBCA-208	ENST00000520361	KIF1A	Q12756	1690 aa		13.56	□□□□□ -0.24
TBCA-208	ENST00000520361	PNPLA6	Q8IY17	1366 aa		13.56	□□□□□ -0.24
TBCA-208	ENST00000520361	NUTM2F	A1L443	756 aa		13.55	□□□□□ -0.24
TBCA-208	ENST00000520361	ESCO1	Q5FWF5	840 aa		13.55	□□□□□ -0.24
TBCA-208	ENST00000520361	LRRC59	Q96AG4	307 aa	Known RBP	13.55	□□□□□ -0.24
TBCA-208	ENST00000520361	ANKAR	Q7Z5J8	1434 aa		13.55	□□□□□ -0.24
TBCA-208	ENST00000520361	MYCN	P04198	464 aa	Predicted RBP	13.53	□□□□□ -0.24
TBCA-208	ENST00000520361	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.53	□□□□□ -0.24
TBCA-208	ENST00000520361	NPHP3	Q7Z494	1330 aa		13.53	□□□□□ -0.24
TBCA-208	ENST00000520361	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.53	□□□□□ -0.24
TBCA-208	ENST00000520361	TULP4	Q9NRJ4	1543 aa		13.53	□□□□□ -0.24
TBCA-208	ENST00000520361	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.53	□□□□□ -0.24
TBCA-208	ENST00000520361	ZBTB22	O15209	634 aa		13.52	□□□□□ -0.25
TBCA-208	ENST00000520361	FOXO3	O43524	673 aa		13.52	□□□□□ -0.25
TBCA-208	ENST00000520361	NBPF8	Q3BBV2	869 aa		13.52	□□□□□ -0.25
TBCA-208	ENST00000520361	PRR36	Q9H6K5	1346 aa		13.52	□□□□□ -0.25
TBCA-208	ENST00000520361	WASL	O00401	505 aa	Predicted RBP	13.51	□□□□□ -0.25
TBCA-208	ENST00000520361	GPRASP1	Q5JY77	1395 aa		13.5	□□□□□ -0.25
TBCA-208	ENST00000520361	PHF8	Q9UPP1	1060 aa		13.5	□□□□□ -0.25
TBCA-208	ENST00000520361	ATP7B	P35670	1465 aa		13.49	□□□□□ -0.25
TBCA-208	ENST00000520361	EIF3A	Q14152	1382 aa	Known RBP	13.49	□□□□□ -0.25
TBCA-208	ENST00000520361	XPC	Q01831	940 aa	Predicted RBP	13.49	□□□□□ -0.25
TBCA-208	ENST00000520361	TOPAZ1	Q8N9V7	1692 aa		13.48	□□□□□ -0.25
TBCA-208	ENST00000520361	QRICH2	Q9H0J4	1663 aa		13.48	□□□□□ -0.25
TBCA-208	ENST00000520361	POTEA	Q6S8J7	498 aa		13.48	□□□□□ -0.25
TBCA-208	ENST00000520361	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.47	□□□□□ -0.25
TBCA-208	ENST00000520361	SPATA31A3	Q5VYP0	1347 aa		13.47	□□□□□ -0.25
TBCA-208	ENST00000520361		U3KPZ7	1027 aa	Predicted RBP	13.47	□□□□□ -0.25
TBCA-208	ENST00000520361	RALGAPB	Q86X10	1494 aa		13.47	□□□□□ -0.25
TBCA-208	ENST00000520361	ITSN1	Q15811	1721 aa		13.47	□□□□□ -0.25
TBCA-208	ENST00000520361	ROCK2	O75116	1388 aa	Known RBP	13.46	□□□□□ -0.25
TBCA-208	ENST00000520361	TONSL	Q96HA7	1378 aa		13.46	□□□□□ -0.25
TBCA-208	ENST00000520361	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.46	□□□□□ -0.25
TBCA-208	ENST00000520361	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.46	□□□□□ -0.25
TBCA-208	ENST00000520361	NUTM2E	B1AL46	878 aa	Predicted RBP	13.46	□□□□□ -0.25
TBCA-208	ENST00000520361	KRT28	Q7Z3Y7	464 aa		13.46	□□□□□ -0.25
TBCA-208	ENST00000520361	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.46	□□□□□ -0.25
TBCA-208	ENST00000520361	PCGF6	Q9BYE7	350 aa		13.46	□□□□□ -0.25
TBCA-208	ENST00000520361	SBNO1	A3KN83	1393 aa		13.45	□□□□□ -0.26
TBCA-208	ENST00000520361	PMFBP1	Q8TBY8	1022 aa		13.45	□□□□□ -0.26
TBCA-208	ENST00000520361	CDK19	Q9BWU1	502 aa		13.45	□□□□□ -0.26
TBCA-208	ENST00000520361	TNS3	Q68CZ2	1445 aa		13.45	□□□□□ -0.26
TBCA-208	ENST00000520361	SOCS7	O14512	581 aa		13.44	□□□□□ -0.26
TBCA-208	ENST00000520361	MEX3C	Q5U5Q3	659 aa	Known RBP	13.44	□□□□□ -0.26
TBCA-208	ENST00000520361	NUDT16	Q96DE0	195 aa	Known RBP	13.44	□□□□□ -0.26
TBCA-208	ENST00000520361	MARF1	Q9Y4F3	1742 aa	Known RBP	13.44	□□□□□ -0.26
TBCA-208	ENST00000520361	ALS2	Q96Q42	1657 aa		13.44	□□□□□ -0.26
TBCA-208	ENST00000520361	ABCA3	Q99758	1704 aa		13.42	□□□□□ -0.26
TBCA-208	ENST00000520361	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.42	□□□□□ -0.26
TBCA-208	ENST00000520361	AFF2	P51816	1311 aa		13.41	□□□□□ -0.26
TBCA-208	ENST00000520361	CLSPN	Q9HAW4	1339 aa		13.41	□□□□□ -0.26
TBCA-208	ENST00000520361	PSME1	Q06323	249 aa		13.41	□□□□□ -0.26
TBCA-208	ENST00000520361	POLR3A	O14802	1390 aa	Predicted RBP	13.41	□□□□□ -0.26

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