RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ORAI2Q96SN7 254 aa19.36■□□□□ 0.69
VEGFA-219ENST00000518824 SAFB2Q14151 953 aaKnown RBP eCLIP19.35■□□□□ 0.69
VEGFA-219ENST00000518824 ILDR2Q71H61 639 aa19.35■□□□□ 0.69
VEGFA-219ENST00000518824 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
VEGFA-219ENST00000518824 NHSL1Q5SYE7 1610 aa19.34■□□□□ 0.69
VEGFA-219ENST00000518824 NUTM2FA1L443 756 aa19.34■□□□□ 0.69
VEGFA-219ENST00000518824 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
VEGFA-219ENST00000518824 PRAM1Q96QH2 718 aa19.34■□□□□ 0.69
VEGFA-219ENST00000518824 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
VEGFA-219ENST00000518824 DLC1Q96QB1 1528 aa19.32■□□□□ 0.68
VEGFA-219ENST00000518824 NBPF1Q3BBV0 1214 aa19.32■□□□□ 0.68
VEGFA-219ENST00000518824 SIRT1Q96EB6 747 aa19.32■□□□□ 0.68
VEGFA-219ENST00000518824 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
VEGFA-219ENST00000518824 FMN2Q9NZ56 1722 aa19.3■□□□□ 0.68
VEGFA-219ENST00000518824 RGPD8O14715 1765 aaPredicted RBP19.29■□□□□ 0.68
VEGFA-219ENST00000518824 ARHGEF28Q8N1W1 1705 aaKnown RBP19.28■□□□□ 0.68
VEGFA-219ENST00000518824 JCADQ9P266 1359 aa19.28■□□□□ 0.68
VEGFA-219ENST00000518824 POGKQ9P215 609 aa19.27■□□□□ 0.68
VEGFA-219ENST00000518824 KIAA1210Q9ULL0 1709 aa19.27■□□□□ 0.68
VEGFA-219ENST00000518824 ESCO1Q5FWF5 840 aa19.26■□□□□ 0.67
VEGFA-219ENST00000518824 HIRIP3Q9BW71 556 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-219ENST00000518824 LRP6O75581 1613 aa19.25■□□□□ 0.67
VEGFA-219ENST00000518824 SHPRHQ149N8 1683 aa19.25■□□□□ 0.67
VEGFA-219ENST00000518824 RGS17Q9UGC6 210 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-219ENST00000518824 MINK1Q8N4C8 1332 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-219ENST00000518824 USP32Q8NFA0 1604 aa19.23■□□□□ 0.67
VEGFA-219ENST00000518824 XPCQ01831 940 aaPredicted RBP19.23■□□□□ 0.67
VEGFA-219ENST00000518824 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
VEGFA-219ENST00000518824 NBPF8Q3BBV2 869 aa19.22■□□□□ 0.67
VEGFA-219ENST00000518824 ADGRB2O60241 1585 aa19.22■□□□□ 0.67
VEGFA-219ENST00000518824 SOS2Q07890 1332 aaPredicted RBP19.22■□□□□ 0.67
VEGFA-219ENST00000518824 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
VEGFA-219ENST00000518824 FOXO3O43524 673 aa19.21■□□□□ 0.67
VEGFA-219ENST00000518824 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
VEGFA-219ENST00000518824 PNPLA6Q8IY17 1366 aa19.19■□□□□ 0.66
VEGFA-219ENST00000518824 PXDNQ92626 1479 aa19.19■□□□□ 0.66
VEGFA-219ENST00000518824 PRR36Q9H6K5 1346 aa19.19■□□□□ 0.66
VEGFA-219ENST00000518824 NUTM2BA6NNL0 878 aaPredicted RBP19.18■□□□□ 0.66
VEGFA-219ENST00000518824 NUTM2EB1AL46 878 aaPredicted RBP19.18■□□□□ 0.66
VEGFA-219ENST00000518824 NUTM2AQ8IVF1 878 aaPredicted RBP19.18■□□□□ 0.66
VEGFA-219ENST00000518824 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
VEGFA-219ENST00000518824 WASLO00401 505 aaPredicted RBP19.16■□□□□ 0.66
VEGFA-219ENST00000518824 SPATA31A6Q5VVP1 1343 aa19.16■□□□□ 0.66
VEGFA-219ENST00000518824 NPHP3Q7Z494 1330 aa19.15■□□□□ 0.66
VEGFA-219ENST00000518824 KIF1AQ12756 1690 aa19.14■□□□□ 0.66
VEGFA-219ENST00000518824 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
VEGFA-219ENST00000518824 PHF8Q9UPP1 1060 aa19.14■□□□□ 0.65
VEGFA-219ENST00000518824 POTEAQ6S8J7 498 aa19.13■□□□□ 0.65
VEGFA-219ENST00000518824 TULP4Q9NRJ4 1543 aa19.13■□□□□ 0.65
VEGFA-219ENST00000518824 ANKARQ7Z5J8 1434 aa19.12■□□□□ 0.65
VEGFA-219ENST00000518824 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
VEGFA-219ENST00000518824 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
VEGFA-219ENST00000518824 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
VEGFA-219ENST00000518824 KRT28Q7Z3Y7 464 aa19.1■□□□□ 0.65
VEGFA-219ENST00000518824 CDK19Q9BWU1 502 aa19.1■□□□□ 0.65
VEGFA-219ENST00000518824 ATP7BP35670 1465 aa19.09■□□□□ 0.65
VEGFA-219ENST00000518824 MEX3CQ5U5Q3 659 aaKnown RBP19.09■□□□□ 0.65
VEGFA-219ENST00000518824 COL22A1Q8NFW1 1626 aaPredicted RBP19.09■□□□□ 0.65
VEGFA-219ENST00000518824 CENPJQ9HC77 1338 aaPredicted RBP19.08■□□□□ 0.65
VEGFA-219ENST00000518824 SPATA31A3Q5VYP0 1347 aa19.07■□□□□ 0.64
VEGFA-219ENST00000518824 ADAMTS2O95450 1211 aa19.07■□□□□ 0.64
VEGFA-219ENST00000518824 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
VEGFA-219ENST00000518824 GPRASP1Q5JY77 1395 aa19.06■□□□□ 0.64
VEGFA-219ENST00000518824 TOPAZ1Q8N9V7 1692 aa19.05■□□□□ 0.64
VEGFA-219ENST00000518824 TRPM3Q9HCF6 1732 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-219ENST00000518824 RALGAPBQ86X10 1494 aa19.04■□□□□ 0.64
VEGFA-219ENST00000518824 PLEKHG5O94827 1062 aa19.04■□□□□ 0.64
VEGFA-219ENST00000518824 PSME1Q06323 249 aa19.04■□□□□ 0.64
VEGFA-219ENST00000518824 C8orf37Q96NL8 207 aa19.04■□□□□ 0.64
VEGFA-219ENST00000518824 CABP2Q9NPB3 220 aa19.04■□□□□ 0.64
VEGFA-219ENST00000518824 EIF3AQ14152 1382 aaKnown RBP19.04■□□□□ 0.64
VEGFA-219ENST00000518824 ITSN1Q15811 1721 aa19.03■□□□□ 0.64
VEGFA-219ENST00000518824 TNS3Q68CZ2 1445 aa19.03■□□□□ 0.64
VEGFA-219ENST00000518824 AFF2P51816 1311 aa19.02■□□□□ 0.64
VEGFA-219ENST00000518824 CABLES1Q8TDN4 633 aa19.02■□□□□ 0.64
VEGFA-219ENST00000518824 SOCS7O14512 581 aa19.01■□□□□ 0.63
VEGFA-219ENST00000518824 CARD11Q9BXL7 1154 aa19.01■□□□□ 0.63
VEGFA-219ENST00000518824 SBNO1A3KN83 1393 aa19.01■□□□□ 0.63
VEGFA-219ENST00000518824 NGDNQ8NEJ9 315 aaKnown RBP19■□□□□ 0.63
VEGFA-219ENST00000518824 ALS2Q96Q42 1657 aa18.99■□□□□ 0.63
VEGFA-219ENST00000518824 SRPK2P78362 688 aaKnown RBP18.99■□□□□ 0.63
VEGFA-219ENST00000518824 LMOD2Q6P5Q4 547 aa18.99■□□□□ 0.63
VEGFA-219ENST00000518824 MARF1Q9Y4F3 1742 aaKnown RBP18.99■□□□□ 0.63
VEGFA-219ENST00000518824 ABCA3Q99758 1704 aa18.98■□□□□ 0.63
VEGFA-219ENST00000518824 CCDC61Q9Y6R9 512 aa18.98■□□□□ 0.63
VEGFA-219ENST00000518824 ACEP12821 1306 aa18.98■□□□□ 0.63
VEGFA-219ENST00000518824 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
VEGFA-219ENST00000518824 PPIP5K1Q6PFW1 1433 aa18.96■□□□□ 0.63
VEGFA-219ENST00000518824 POLR3AO14802 1390 aaPredicted RBP18.95■□□□□ 0.62
VEGFA-219ENST00000518824 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
VEGFA-219ENST00000518824 ZNF772Q68DY9 489 aaPredicted RBP18.95■□□□□ 0.62
VEGFA-219ENST00000518824 PAK3O75914 559 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-219ENST00000518824 CABP1Q9NZU7 370 aa18.93■□□□□ 0.62
VEGFA-219ENST00000518824 CRYBG1Q9Y4K1 1723 aa18.93■□□□□ 0.62
VEGFA-219ENST00000518824 EVC2Q86UK5 1308 aa18.93■□□□□ 0.62
VEGFA-219ENST00000518824 FNBP4Q8N3X1 1017 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-219ENST00000518824 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-219ENST00000518824 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
VEGFA-219ENST00000518824 ARHGEF10O15013 1369 aa18.92■□□□□ 0.62
VEGFA-219ENST00000518824 NUTM2GQ5VZR2 741 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms