RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
TRAPPC9-204ENST00000518723 KIF1BO60333 1816 aa18.8■□□□□ 0.6
TRAPPC9-204ENST00000518723 ZRANB1Q9UGI0 708 aa18.8■□□□□ 0.6
TRAPPC9-204ENST00000518723 NPHP3Q7Z494 1330 aa18.79■□□□□ 0.6
TRAPPC9-204ENST00000518723 CCDC125Q86Z20 511 aa18.79■□□□□ 0.6
TRAPPC9-204ENST00000518723 BCL9LQ86UU0 1499 aa18.78■□□□□ 0.6
TRAPPC9-204ENST00000518723 PXDNQ92626 1479 aa18.77■□□□□ 0.6
TRAPPC9-204ENST00000518723 CDC42BPGQ6DT37 1551 aa18.77■□□□□ 0.6
TRAPPC9-204ENST00000518723 NAIPQ13075 1403 aa18.75■□□□□ 0.59
TRAPPC9-204ENST00000518723 ESCO1Q5FWF5 840 aa18.75■□□□□ 0.59
TRAPPC9-204ENST00000518723 GJD4Q96KN9 370 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC9-204ENST00000518723 LRPPRCP42704 1394 aaKnown RBP18.72■□□□□ 0.59
TRAPPC9-204ENST00000518723 FOXO3O43524 673 aa18.71■□□□□ 0.59
TRAPPC9-204ENST00000518723 PPLO60437 1756 aa18.7■□□□□ 0.58
TRAPPC9-204ENST00000518723 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
TRAPPC9-204ENST00000518723 TECPR2O15040 1411 aa18.69■□□□□ 0.58
TRAPPC9-204ENST00000518723 RRBP1Q9P2E9 1410 aaKnown RBP18.69■□□□□ 0.58
TRAPPC9-204ENST00000518723 XPCQ01831 940 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC9-204ENST00000518723 UNC5CLQ8IV45 518 aa18.68■□□□□ 0.58
TRAPPC9-204ENST00000518723 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-204ENST00000518723 SLIT2O94813 1529 aa18.68■□□□□ 0.58
TRAPPC9-204ENST00000518723 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC9-204ENST00000518723 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-204ENST00000518723 RALGAPBQ86X10 1494 aa18.66■□□□□ 0.58
TRAPPC9-204ENST00000518723 SLC4A1APQ9BWU0 796 aaKnown RBP18.66■□□□□ 0.58
TRAPPC9-204ENST00000518723 GLI3P10071 1580 aa18.65■□□□□ 0.58
TRAPPC9-204ENST00000518723 SPATA31A3Q5VYP0 1347 aa18.65■□□□□ 0.58
TRAPPC9-204ENST00000518723 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
TRAPPC9-204ENST00000518723 ADGRF5Q8IZF2 1346 aa18.64■□□□□ 0.57
TRAPPC9-204ENST00000518723 CCDC144AA2RUR9 1427 aa18.64■□□□□ 0.57
TRAPPC9-204ENST00000518723 WAPLQ7Z5K2 1190 aa18.63■□□□□ 0.57
TRAPPC9-204ENST00000518723 ANKRD30BQ9BXX2 1392 aa18.61■□□□□ 0.57
TRAPPC9-204ENST00000518723 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
TRAPPC9-204ENST00000518723 STK26Q9P289 416 aa18.61■□□□□ 0.57
TRAPPC9-204ENST00000518723 KIF1AQ12756 1690 aa18.6■□□□□ 0.57
TRAPPC9-204ENST00000518723 USP32Q8NFA0 1604 aa18.6■□□□□ 0.57
TRAPPC9-204ENST00000518723 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
TRAPPC9-204ENST00000518723 SPATA31E1Q6ZUB1 1445 aa18.59■□□□□ 0.57
TRAPPC9-204ENST00000518723 KNDC1Q76NI1 1749 aa18.59■□□□□ 0.57
TRAPPC9-204ENST00000518723 FMN2Q9NZ56 1722 aa18.59■□□□□ 0.57
TRAPPC9-204ENST00000518723 ONECUT3O60422 494 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC9-204ENST00000518723 VPS72Q15906 364 aa18.58■□□□□ 0.56
TRAPPC9-204ENST00000518723 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.56
TRAPPC9-204ENST00000518723 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
TRAPPC9-204ENST00000518723 DEFB132Q7Z7B7 95 aa18.57■□□□□ 0.56
TRAPPC9-204ENST00000518723 SEPT12Q8IYM1 358 aa18.57■□□□□ 0.56
TRAPPC9-204ENST00000518723 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
TRAPPC9-204ENST00000518723 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
TRAPPC9-204ENST00000518723 SF3B2Q13435 895 aaKnown RBP18.56■□□□□ 0.56
TRAPPC9-204ENST00000518723 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
TRAPPC9-204ENST00000518723 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
TRAPPC9-204ENST00000518723 RGL3Q3MIN7 710 aa18.55■□□□□ 0.56
TRAPPC9-204ENST00000518723 IFT172Q9UG01 1749 aa18.54■□□□□ 0.56
TRAPPC9-204ENST00000518723 PSME1Q06323 249 aa18.54■□□□□ 0.56
TRAPPC9-204ENST00000518723 SBNO1A3KN83 1393 aa18.54■□□□□ 0.56
TRAPPC9-204ENST00000518723 BRWD3Q6RI45 1802 aa18.53■□□□□ 0.56
TRAPPC9-204ENST00000518723 HAP1P54257 671 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC9-204ENST00000518723 PHF8Q9UPP1 1060 aa18.53■□□□□ 0.56
TRAPPC9-204ENST00000518723 LRP5O75197 1615 aa18.52■□□□□ 0.56
TRAPPC9-204ENST00000518723 NWD2Q9ULI1 1742 aa18.52■□□□□ 0.56
TRAPPC9-204ENST00000518723 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
TRAPPC9-204ENST00000518723 ARHGEF10O15013 1369 aa18.52■□□□□ 0.55
TRAPPC9-204ENST00000518723 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.55
TRAPPC9-204ENST00000518723 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
TRAPPC9-204ENST00000518723 PLCH1Q4KWH8 1693 aa18.5■□□□□ 0.55
TRAPPC9-204ENST00000518723 C14orf93Q9H972 538 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-204ENST00000518723 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-204ENST00000518723 ABCA3Q99758 1704 aa18.47■□□□□ 0.55
TRAPPC9-204ENST00000518723 FAM83GA6ND36 823 aa18.47■□□□□ 0.55
TRAPPC9-204ENST00000518723 BAG6P46379 1132 aa18.47■□□□□ 0.55
TRAPPC9-204ENST00000518723 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
TRAPPC9-204ENST00000518723 DHX57Q6P158 1386 aaKnown RBP18.46■□□□□ 0.55
TRAPPC9-204ENST00000518723 ANKARQ7Z5J8 1434 aa18.46■□□□□ 0.55
TRAPPC9-204ENST00000518723 LMOD2Q6P5Q4 547 aa18.45■□□□□ 0.54
TRAPPC9-204ENST00000518723 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC9-204ENST00000518723 HRCP23327 699 aa18.43■□□□□ 0.54
TRAPPC9-204ENST00000518723 PRAM1Q96QH2 718 aa18.43■□□□□ 0.54
TRAPPC9-204ENST00000518723 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
TRAPPC9-204ENST00000518723 FAM98CQ17RN3 349 aaKnown RBP18.42■□□□□ 0.54
TRAPPC9-204ENST00000518723 CFAP70Q5T0N1 1121 aa18.42■□□□□ 0.54
TRAPPC9-204ENST00000518723 NRAPQ86VF7 1730 aa18.42■□□□□ 0.54
TRAPPC9-204ENST00000518723 DLC1Q96QB1 1528 aa18.42■□□□□ 0.54
TRAPPC9-204ENST00000518723 A0A0G2JS52 829 aa18.41■□□□□ 0.54
TRAPPC9-204ENST00000518723 PSDA5PKW4 1024 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC9-204ENST00000518723 MYT1Q01538 1121 aa18.41■□□□□ 0.54
TRAPPC9-204ENST00000518723 BTG4Q9NY30 223 aa18.41■□□□□ 0.54
TRAPPC9-204ENST00000518723 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
TRAPPC9-204ENST00000518723 SAFB2Q14151 953 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRAPPC9-204ENST00000518723 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
TRAPPC9-204ENST00000518723 DISP2A7MBM2 1401 aa18.4■□□□□ 0.54
TRAPPC9-204ENST00000518723 TRPM3Q9HCF6 1732 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC9-204ENST00000518723 POGKQ9P215 609 aa18.38■□□□□ 0.53
TRAPPC9-204ENST00000518723 SPATA31A5Q5VU36 1347 aa18.38■□□□□ 0.53
TRAPPC9-204ENST00000518723 SPATA31A7Q8IWB4 1347 aa18.38■□□□□ 0.53
TRAPPC9-204ENST00000518723 COL14A1Q05707 1796 aaKnown RBP18.37■□□□□ 0.53
TRAPPC9-204ENST00000518723 GPRASP1Q5JY77 1395 aa18.37■□□□□ 0.53
TRAPPC9-204ENST00000518723 ALS2Q96Q42 1657 aa18.37■□□□□ 0.53
TRAPPC9-204ENST00000518723 RGPD1P0DJD0 1748 aa18.36■□□□□ 0.53
TRAPPC9-204ENST00000518723 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC9-204ENST00000518723 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms