RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 ABCA9Q8IUA7 1624 aa13.05□□□□□ -0.32
NPM1-204ENST00000517671 ARID3CA6NKF2 412 aa13.05□□□□□ -0.32
NPM1-204ENST00000517671 TSKSQ9UJT2 592 aa13.05□□□□□ -0.32
NPM1-204ENST00000517671 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
NPM1-204ENST00000517671 GPR37O15354 613 aa13.03□□□□□ -0.32
NPM1-204ENST00000517671 KIF21BO75037 1637 aa13.02□□□□□ -0.32
NPM1-204ENST00000517671 ADAMTSL3P82987 1691 aa13.02□□□□□ -0.32
NPM1-204ENST00000517671 NBPF26B4DH59 902 aa13.02□□□□□ -0.33
NPM1-204ENST00000517671 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
NPM1-204ENST00000517671 AKNAQ7Z591 1439 aa13.02□□□□□ -0.33
NPM1-204ENST00000517671 MRPL50Q8N5N7 158 aaKnown RBP13.01□□□□□ -0.33
NPM1-204ENST00000517671 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
NPM1-204ENST00000517671 FHOD3Q2V2M9 1422 aa13.01□□□□□ -0.33
NPM1-204ENST00000517671 MAGI2Q86UL8 1455 aa13.01□□□□□ -0.33
NPM1-204ENST00000517671 PCF11O94913 1555 aaKnown RBP13.01□□□□□ -0.33
NPM1-204ENST00000517671 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
NPM1-204ENST00000517671 PNMA3Q9UL41 463 aa13□□□□□ -0.33
NPM1-204ENST00000517671 EEA1Q15075 1411 aa12.99□□□□□ -0.33
NPM1-204ENST00000517671 TATDN2Q93075 761 aa12.99□□□□□ -0.33
NPM1-204ENST00000517671 FANCAO15360 1455 aa12.98□□□□□ -0.33
NPM1-204ENST00000517671 BHMG1C9JSJ3 638 aaPredicted RBP12.98□□□□□ -0.33
NPM1-204ENST00000517671 ZMYND10O75800 440 aa12.98□□□□□ -0.33
NPM1-204ENST00000517671 FECHP22830 423 aa12.98□□□□□ -0.33
NPM1-204ENST00000517671 NUDT18Q6ZVK8 323 aa12.98□□□□□ -0.33
NPM1-204ENST00000517671 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
NPM1-204ENST00000517671 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
NPM1-204ENST00000517671 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
NPM1-204ENST00000517671 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
NPM1-204ENST00000517671 OATP04181 439 aa12.96□□□□□ -0.33
NPM1-204ENST00000517671 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
NPM1-204ENST00000517671 BCORL1Q5H9F3 1711 aa12.96□□□□□ -0.33
NPM1-204ENST00000517671 RAPGEF6Q8TEU7 1601 aa12.96□□□□□ -0.34
NPM1-204ENST00000517671 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
NPM1-204ENST00000517671 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
NPM1-204ENST00000517671 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
NPM1-204ENST00000517671 SEPT9Q9UHD8 586 aaPredicted RBP12.95□□□□□ -0.34
NPM1-204ENST00000517671 NUP153P49790 1475 aaKnown RBP12.95□□□□□ -0.34
NPM1-204ENST00000517671 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
NPM1-204ENST00000517671 SMAPO00193 183 aa12.94□□□□□ -0.34
NPM1-204ENST00000517671 EFCAB2Q5VUJ9 269 aa12.94□□□□□ -0.34
NPM1-204ENST00000517671 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
NPM1-204ENST00000517671 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
NPM1-204ENST00000517671 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
NPM1-204ENST00000517671 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
NPM1-204ENST00000517671 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
NPM1-204ENST00000517671 IRF6O14896 467 aa12.92□□□□□ -0.34
NPM1-204ENST00000517671 HSPA2P54652 639 aa12.92□□□□□ -0.34
NPM1-204ENST00000517671 PTPN5P54829 565 aa12.92□□□□□ -0.34
NPM1-204ENST00000517671 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
NPM1-204ENST00000517671 ARHGEF40Q8TER5 1519 aa12.91□□□□□ -0.34
NPM1-204ENST00000517671 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
NPM1-204ENST00000517671 PLCH2O75038 1416 aa12.91□□□□□ -0.34
NPM1-204ENST00000517671 ZMYM4Q5VZL5 1548 aa12.9□□□□□ -0.34
NPM1-204ENST00000517671 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
NPM1-204ENST00000517671 EYA1Q99502 592 aa12.89□□□□□ -0.35
NPM1-204ENST00000517671 SCAPERQ9BY12 1400 aa12.89□□□□□ -0.35
NPM1-204ENST00000517671 ZFYVE16Q7Z3T8 1539 aa12.89□□□□□ -0.35
NPM1-204ENST00000517671 MLECQ14165 292 aa12.88□□□□□ -0.35
NPM1-204ENST00000517671 ATP10AO60312 1499 aa12.88□□□□□ -0.35
NPM1-204ENST00000517671 FRMPD1Q5SYB0 1578 aa12.88□□□□□ -0.35
NPM1-204ENST00000517671 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
NPM1-204ENST00000517671 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
NPM1-204ENST00000517671 RANGAP1P46060 587 aaPredicted RBP12.88□□□□□ -0.35
NPM1-204ENST00000517671 ZFRQ96KR1 1074 aaKnown RBP12.88□□□□□ -0.35
NPM1-204ENST00000517671 ESF1Q9H501 851 aaKnown RBP12.88□□□□□ -0.35
NPM1-204ENST00000517671 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
NPM1-204ENST00000517671 PXYLP1Q8TE99 480 aa12.87□□□□□ -0.35
NPM1-204ENST00000517671 WNT2BQ93097 391 aa12.87□□□□□ -0.35
NPM1-204ENST00000517671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.355e-17■□□□□ 10.1
NPM1-204ENST00000517671 DNAJB2P25686 324 aa12.86□□□□□ -0.35
NPM1-204ENST00000517671 METTL3Q86U44 580 aaKnown RBP12.86□□□□□ -0.35
NPM1-204ENST00000517671 CCDC102AQ96A19 550 aa12.86□□□□□ -0.35
NPM1-204ENST00000517671 C9orf84Q5VXU9 1444 aa12.85□□□□□ -0.35
NPM1-204ENST00000517671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
NPM1-204ENST00000517671 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
NPM1-204ENST00000517671 AK7Q96M32 723 aa12.85□□□□□ -0.35
NPM1-204ENST00000517671 FMN1Q68DA7 1419 aa12.85□□□□□ -0.35
NPM1-204ENST00000517671 RICTORQ6R327 1708 aa12.84□□□□□ -0.35
NPM1-204ENST00000517671 RCCD1A6NED2 376 aa12.84□□□□□ -0.35
NPM1-204ENST00000517671 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
NPM1-204ENST00000517671 THSD4Q6ZMP0 1018 aa12.84□□□□□ -0.35
NPM1-204ENST00000517671 SLC24A3Q9HC58 644 aa12.84□□□□□ -0.35
NPM1-204ENST00000517671 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
NPM1-204ENST00000517671 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
NPM1-204ENST00000517671 RIMS1Q86UR5 1692 aaKnown RBP12.83□□□□□ -0.36
NPM1-204ENST00000517671 UHRF1BP1Q6BDS2 1440 aa12.82□□□□□ -0.36
NPM1-204ENST00000517671 ZNF518AQ6AHZ1 1483 aa12.82□□□□□ -0.36
NPM1-204ENST00000517671 ARHGEF12Q9NZN5 1544 aa12.81□□□□□ -0.36
NPM1-204ENST00000517671 SOCS7O14512 581 aa12.81□□□□□ -0.36
NPM1-204ENST00000517671 RGS20O76081 388 aa12.81□□□□□ -0.36
NPM1-204ENST00000517671 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.81□□□□□ -0.36
NPM1-204ENST00000517671 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
NPM1-204ENST00000517671 CLIP1P30622 1438 aa12.8□□□□□ -0.36
NPM1-204ENST00000517671 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
NPM1-204ENST00000517671 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
NPM1-204ENST00000517671 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
NPM1-204ENST00000517671 PTPRTO14522 1441 aa12.79□□□□□ -0.36
NPM1-204ENST00000517671 DISP3Q9P2K9 1392 aa12.79□□□□□ -0.36
NPM1-204ENST00000517671 CEBPAP49715 358 aaPredicted RBP12.78□□□□□ -0.36
NPM1-204ENST00000517671 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms