RNA–Protein interactions for RNA: ENST00000517553.1

TRAPPC2-205, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 475 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-205ENST00000517553 CCDC102AQ96A19 550 aa6.06□□□□□ -1.44
TRAPPC2-205ENST00000517553 RCCD1A6NED2 376 aa6.05□□□□□ -1.44
TRAPPC2-205ENST00000517553 TRIM66O15016 1216 aa6.05□□□□□ -1.44
TRAPPC2-205ENST00000517553 NR1I2O75469 434 aa6.05□□□□□ -1.44
TRAPPC2-205ENST00000517553 SLC10A3P09131 477 aa6.05□□□□□ -1.44
TRAPPC2-205ENST00000517553 AMHR2Q16671 573 aa6.05□□□□□ -1.44
TRAPPC2-205ENST00000517553 OATP04181 439 aa6.04□□□□□ -1.44
TRAPPC2-205ENST00000517553 SNRPBP14678 240 aaKnown RBP6.04□□□□□ -1.44
TRAPPC2-205ENST00000517553 BRPF1P55201 1214 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC2-205ENST00000517553 NEUROD2Q15784 382 aa6.04□□□□□ -1.44
TRAPPC2-205ENST00000517553 TMEM132AQ24JP5 1023 aa6.04□□□□□ -1.44
TRAPPC2-205ENST00000517553 SPSB2Q99619 263 aa6.04□□□□□ -1.44
TRAPPC2-205ENST00000517553 TMEM134Q9H6X4 195 aa6.04□□□□□ -1.44
TRAPPC2-205ENST00000517553 TOR4AQ9NXH8 423 aa6.04□□□□□ -1.44
TRAPPC2-205ENST00000517553 TTC24A2A3L6 582 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC2-205ENST00000517553 CD2BP2O95400 341 aaKnown RBP6.03□□□□□ -1.44
TRAPPC2-205ENST00000517553 AVPP01185 164 aa6.03□□□□□ -1.44
TRAPPC2-205ENST00000517553 PDE4DQ08499 809 aa6.03□□□□□ -1.44
TRAPPC2-205ENST00000517553 CRIPAKQ8N1N5 446 aa6.03□□□□□ -1.44
TRAPPC2-205ENST00000517553 RBM46Q8TBY0 533 aaKnown RBP6.03□□□□□ -1.44
TRAPPC2-205ENST00000517553 ADGRG1Q9Y653 693 aa6.02□□□□□ -1.45
TRAPPC2-205ENST00000517553 FECHP22830 423 aa6.01□□□□□ -1.45
TRAPPC2-205ENST00000517553 GSK3AP49840 483 aa6.01□□□□□ -1.45
TRAPPC2-205ENST00000517553 PSMG3-AS1Q96PY0 264 aa6.01□□□□□ -1.45
TRAPPC2-205ENST00000517553 FCF1Q9Y324 198 aaKnown RBP6.01□□□□□ -1.45
TRAPPC2-205ENST00000517553 CLCN1P35523 988 aa6□□□□□ -1.45
TRAPPC2-205ENST00000517553 GMPRP36959 345 aa6□□□□□ -1.45
TRAPPC2-205ENST00000517553 RPIAP49247 311 aa5.99□□□□□ -1.45
TRAPPC2-205ENST00000517553 CTC1Q2NKJ3 1217 aa5.99□□□□□ -1.45
TRAPPC2-205ENST00000517553 METTL3Q86U44 580 aaKnown RBP5.99□□□□□ -1.45
TRAPPC2-205ENST00000517553 ATP13A2Q9NQ11 1180 aa5.99□□□□□ -1.45
TRAPPC2-205ENST00000517553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.98□□□□□ -1.45
TRAPPC2-205ENST00000517553 TTLL12Q14166 644 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC2-205ENST00000517553 PXYLP1Q8TE99 480 aa5.98□□□□□ -1.45
TRAPPC2-205ENST00000517553 KDM4CQ9H3R0 1056 aa5.98□□□□□ -1.45
TRAPPC2-205ENST00000517553 GPCPD1Q9NPB8 672 aa5.98□□□□□ -1.45
TRAPPC2-205ENST00000517553 ZBTB24O43167 697 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC2-205ENST00000517553 SMCPP49901 116 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC2-205ENST00000517553 KCNMA1Q12791 1236 aa5.97□□□□□ -1.45
TRAPPC2-205ENST00000517553 PARP9Q8IXQ6 854 aa5.97□□□□□ -1.45
TRAPPC2-205ENST00000517553 DDRGK1Q96HY6 314 aa5.97□□□□□ -1.45
TRAPPC2-205ENST00000517553 J3QL48 77 aa5.96□□□□□ -1.46
TRAPPC2-205ENST00000517553 SMPD1P17405 629 aa5.96□□□□□ -1.46
TRAPPC2-205ENST00000517553 FAM160A2Q8N612 972 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC2-205ENST00000517553 GPBP1L1Q9HC44 474 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC2-205ENST00000517553 PRDM9Q9NQV7 894 aa5.95□□□□□ -1.46
TRAPPC2-205ENST00000517553 GIGYF2Q6Y7W6 1299 aaKnown RBP5.94□□□□□ -1.46
TRAPPC2-205ENST00000517553 MORN1Q5T089 497 aa5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 RSPH4AQ5TD94 716 aa5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 SULF1Q8IWU6 871 aa5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 SNIP1Q8TAD8 396 aaKnown RBP5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 HPS1Q92902 700 aa5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 THAP11Q96EK4 314 aa5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 TRIM47Q96LD4 638 aa5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 SENP2Q9HC62 589 aa5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 SLC27A5Q9Y2P5 690 aa5.93□□□□□ -1.46
TRAPPC2-205ENST00000517553 VEGFBP49765 207 aa5.92□□□□□ -1.46
TRAPPC2-205ENST00000517553 MDM2Q00987 491 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC2-205ENST00000517553 FUT2Q10981 343 aa5.92□□□□□ -1.46
TRAPPC2-205ENST00000517553 DIXDC1Q155Q3 683 aa5.92□□□□□ -1.46
TRAPPC2-205ENST00000517553 RDH13Q8NBN7 331 aa5.92□□□□□ -1.46
TRAPPC2-205ENST00000517553 MRGPRX2Q96LB1 330 aa5.92□□□□□ -1.46
TRAPPC2-205ENST00000517553 GOPCQ9HD26 462 aa5.92□□□□□ -1.46
TRAPPC2-205ENST00000517553 FMNL1O95466 1100 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC2-205ENST00000517553 ERICH6Q7L0X2 663 aa5.91□□□□□ -1.46
TRAPPC2-205ENST00000517553 SLC16A10Q8TF71 515 aa5.91□□□□□ -1.46
TRAPPC2-205ENST00000517553 PHOX2BQ99453 314 aa5.91□□□□□ -1.46
TRAPPC2-205ENST00000517553 DDX11L8A8MPP1 907 aa5.9□□□□□ -1.46
TRAPPC2-205ENST00000517553 WNT7AO00755 349 aa5.9□□□□□ -1.46
TRAPPC2-205ENST00000517553 TMEM151AQ8N4L1 468 aa5.9□□□□□ -1.46
TRAPPC2-205ENST00000517553 NLRP7Q8WX94 980 aa5.9□□□□□ -1.46
TRAPPC2-205ENST00000517553 FAM217BQ9NTX9 383 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC2-205ENST00000517553 SSTR3P32745 418 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC2-205ENST00000517553 ATP6V1AP38606 617 aa5.89□□□□□ -1.47
TRAPPC2-205ENST00000517553 RNF19BQ6ZMZ0 732 aa5.89□□□□□ -1.47
TRAPPC2-205ENST00000517553 RSPH6AQ9H0K4 717 aa5.89□□□□□ -1.47
TRAPPC2-205ENST00000517553 MS4A1P11836 297 aa5.88□□□□□ -1.47
TRAPPC2-205ENST00000517553 TRIM32Q13049 653 aa5.88□□□□□ -1.47
TRAPPC2-205ENST00000517553 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
TRAPPC2-205ENST00000517553 REPIN1Q9BWE0 567 aaKnown RBP5.88□□□□□ -1.47
TRAPPC2-205ENST00000517553 FAM117AQ9C073 453 aa5.88□□□□□ -1.47
TRAPPC2-205ENST00000517553 NXF1Q9UBU9 619 aaKnown RBP5.88□□□□□ -1.47
TRAPPC2-205ENST00000517553 GDF11O95390 407 aa5.87□□□□□ -1.47
TRAPPC2-205ENST00000517553 SH3D19Q5HYK7 790 aa5.87□□□□□ -1.47
TRAPPC2-205ENST00000517553 BRICD5Q6PL45 260 aa5.87□□□□□ -1.47
TRAPPC2-205ENST00000517553 IL27Q8NEV9 243 aa5.87□□□□□ -1.47
TRAPPC2-205ENST00000517553 KIFC2Q96AC6 838 aa5.87□□□□□ -1.47
TRAPPC2-205ENST00000517553 CD46P15529 392 aa5.86□□□□□ -1.47
TRAPPC2-205ENST00000517553 CCDC24Q8N4L8 307 aa5.86□□□□□ -1.47
TRAPPC2-205ENST00000517553 BEGAINQ9BUH8 593 aa5.86□□□□□ -1.47
TRAPPC2-205ENST00000517553 GTF3C3Q9Y5Q9 886 aa5.86□□□□□ -1.47
TRAPPC2-205ENST00000517553 PLEKHG3A1L390 1219 aa5.85□□□□□ -1.47
TRAPPC2-205ENST00000517553 ALDH1A1P00352 501 aa5.85□□□□□ -1.47
TRAPPC2-205ENST00000517553 BMP1P13497 986 aa5.85□□□□□ -1.47
TRAPPC2-205ENST00000517553 RASSF7Q02833 373 aa5.85□□□□□ -1.47
TRAPPC2-205ENST00000517553 RC3H1Q5TC82 1133 aaKnown RBP5.85□□□□□ -1.47
TRAPPC2-205ENST00000517553 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
TRAPPC2-205ENST00000517553 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
TRAPPC2-205ENST00000517553 GCGRP47871 477 aa5.84□□□□□ -1.47
TRAPPC2-205ENST00000517553 IRF7Q92985 503 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms