RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
CTNNA1-203ENST00000517534 RBM6P78332 1123 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-203ENST00000517534 MPHOSPH9Q99550 1183 aa12.54□□□□□ -0.4
CTNNA1-203ENST00000517534 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
CTNNA1-203ENST00000517534 SPATA31E1Q6ZUB1 1445 aa12.53□□□□□ -0.4
CTNNA1-203ENST00000517534 RGL3Q3MIN7 710 aa12.52□□□□□ -0.41
CTNNA1-203ENST00000517534 WAPLQ7Z5K2 1190 aa12.52□□□□□ -0.41
CTNNA1-203ENST00000517534 FNBP4Q8N3X1 1017 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-203ENST00000517534 KIF1BO60333 1816 aa12.52□□□□□ -0.41
CTNNA1-203ENST00000517534 LAMC1P11047 1609 aa12.51□□□□□ -0.41
CTNNA1-203ENST00000517534 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
CTNNA1-203ENST00000517534 ESCO1Q5FWF5 840 aa12.51□□□□□ -0.41
CTNNA1-203ENST00000517534 RGS12O14924 1447 aa12.51□□□□□ -0.41
CTNNA1-203ENST00000517534 TMEM132EQ6IEE7 984 aa12.5□□□□□ -0.41
CTNNA1-203ENST00000517534 STK26Q9P289 416 aa12.5□□□□□ -0.41
CTNNA1-203ENST00000517534 USP21Q9UK80 565 aa12.5□□□□□ -0.41
CTNNA1-203ENST00000517534 LRPPRCP42704 1394 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-203ENST00000517534 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
CTNNA1-203ENST00000517534 CCDC144AA2RUR9 1427 aa12.5□□□□□ -0.41
CTNNA1-203ENST00000517534 TECPR2O15040 1411 aa12.49□□□□□ -0.41
CTNNA1-203ENST00000517534 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
CTNNA1-203ENST00000517534 FOXO3O43524 673 aa12.49□□□□□ -0.41
CTNNA1-203ENST00000517534 PLEKHH1Q9ULM0 1364 aa12.48□□□□□ -0.41
CTNNA1-203ENST00000517534 NPHP3Q7Z494 1330 aa12.48□□□□□ -0.41
CTNNA1-203ENST00000517534 TRPC5Q9UL62 973 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-203ENST00000517534 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
CTNNA1-203ENST00000517534 XPCQ01831 940 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-203ENST00000517534 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
CTNNA1-203ENST00000517534 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
CTNNA1-203ENST00000517534 PPLO60437 1756 aa12.47□□□□□ -0.41
CTNNA1-203ENST00000517534 MYOM2P54296 1465 aa12.46□□□□□ -0.41
CTNNA1-203ENST00000517534 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.41
CTNNA1-203ENST00000517534 CDC42BPGQ6DT37 1551 aa12.46□□□□□ -0.42
CTNNA1-203ENST00000517534 PXDNQ92626 1479 aa12.46□□□□□ -0.42
CTNNA1-203ENST00000517534 PIK3C2GO75747 1445 aa12.45□□□□□ -0.42
CTNNA1-203ENST00000517534 ATRNO75882 1429 aa12.45□□□□□ -0.42
CTNNA1-203ENST00000517534 YTHDC2Q9H6S0 1430 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-203ENST00000517534 BCL9LQ86UU0 1499 aa12.43□□□□□ -0.42
CTNNA1-203ENST00000517534 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
CTNNA1-203ENST00000517534 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
CTNNA1-203ENST00000517534 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
CTNNA1-203ENST00000517534 COL22A1Q8NFW1 1626 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-203ENST00000517534 NRXN1Q9ULB1 1477 aa12.41□□□□□ -0.42
CTNNA1-203ENST00000517534 KRT28Q7Z3Y7 464 aa12.41□□□□□ -0.42
CTNNA1-203ENST00000517534 GJD4Q96KN9 370 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-203ENST00000517534 EP400Q96L91 3159 aa12.41□□□□□ -0.42
CTNNA1-203ENST00000517534 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
CTNNA1-203ENST00000517534 ACIN1Q9UKV3 1341 aaKnown RBP12.4□□□□□ -0.42
CTNNA1-203ENST00000517534 PHF8Q9UPP1 1060 aa12.39□□□□□ -0.43
CTNNA1-203ENST00000517534 DHX57Q6P158 1386 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-203ENST00000517534 UNC5CLQ8IV45 518 aa12.38□□□□□ -0.43
CTNNA1-203ENST00000517534 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
CTNNA1-203ENST00000517534 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
CTNNA1-203ENST00000517534 SAFB2Q14151 953 aaKnown RBP eCLIP12.37□□□□□ -0.43
CTNNA1-203ENST00000517534 SLIT2O94813 1529 aa12.37□□□□□ -0.43
CTNNA1-203ENST00000517534 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
CTNNA1-203ENST00000517534 KNDC1Q76NI1 1749 aa12.36□□□□□ -0.43
CTNNA1-203ENST00000517534 SBNO1A3KN83 1393 aa12.35□□□□□ -0.43
CTNNA1-203ENST00000517534 RAB3GAP2Q9H2M9 1393 aa12.35□□□□□ -0.43
CTNNA1-203ENST00000517534 PSME1Q06323 249 aa12.35□□□□□ -0.43
CTNNA1-203ENST00000517534 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
CTNNA1-203ENST00000517534 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
CTNNA1-203ENST00000517534 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
CTNNA1-203ENST00000517534 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
CTNNA1-203ENST00000517534 POGKQ9P215 609 aa12.34□□□□□ -0.43
CTNNA1-203ENST00000517534 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
CTNNA1-203ENST00000517534 ONECUT3O60422 494 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-203ENST00000517534 VPS72Q15906 364 aa12.33□□□□□ -0.44
CTNNA1-203ENST00000517534 DLC1Q96QB1 1528 aa12.32□□□□□ -0.44
CTNNA1-203ENST00000517534 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
CTNNA1-203ENST00000517534 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
CTNNA1-203ENST00000517534 ADGRB1O14514 1584 aa12.31□□□□□ -0.44
CTNNA1-203ENST00000517534 GLI3P10071 1580 aa12.31□□□□□ -0.44
CTNNA1-203ENST00000517534 ANKARQ7Z5J8 1434 aa12.31□□□□□ -0.44
CTNNA1-203ENST00000517534 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
CTNNA1-203ENST00000517534 SEPT12Q8IYM1 358 aa12.31□□□□□ -0.44
CTNNA1-203ENST00000517534 HIRIP3Q9BW71 556 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-203ENST00000517534 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
CTNNA1-203ENST00000517534 PRR36Q9H6K5 1346 aa12.31□□□□□ -0.44
CTNNA1-203ENST00000517534 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
CTNNA1-203ENST00000517534 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
CTNNA1-203ENST00000517534 DCAF11Q8TEB1 546 aa12.3□□□□□ -0.44
CTNNA1-203ENST00000517534 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
CTNNA1-203ENST00000517534 KDM2AQ9Y2K7 1162 aa12.3□□□□□ -0.44
CTNNA1-203ENST00000517534 MINK1Q8N4C8 1332 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-203ENST00000517534 WASLO00401 505 aaPredicted RBP12.29□□□□□ -0.44
CTNNA1-203ENST00000517534 HRCP23327 699 aa12.29□□□□□ -0.44
CTNNA1-203ENST00000517534 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
CTNNA1-203ENST00000517534 USP32Q8NFA0 1604 aa12.29□□□□□ -0.44
CTNNA1-203ENST00000517534 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
CTNNA1-203ENST00000517534 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-203ENST00000517534 DEFB132Q7Z7B7 95 aa12.27□□□□□ -0.45
CTNNA1-203ENST00000517534 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-203ENST00000517534 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
CTNNA1-203ENST00000517534 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-203ENST00000517534 ADGRB2O60241 1585 aa12.26□□□□□ -0.45
CTNNA1-203ENST00000517534 KRT27Q7Z3Y8 459 aa12.25□□□□□ -0.45
CTNNA1-203ENST00000517534 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
CTNNA1-203ENST00000517534 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
CTNNA1-203ENST00000517534 RGPD8O14715 1765 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms