RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 SLC27A5Q9Y2P5 690 aa8□□□□□ -1.13
RNU6-1046P-201ENST00000516538 SNRPBP14678 240 aaKnown RBP7.99□□□□□ -1.13
RNU6-1046P-201ENST00000516538 P3H3Q8IVL6 736 aa7.99□□□□□ -1.13
RNU6-1046P-201ENST00000516538 PRDM9Q9NQV7 894 aa7.99□□□□□ -1.13
RNU6-1046P-201ENST00000516538 TRIM32Q13049 653 aa7.98□□□□□ -1.13
RNU6-1046P-201ENST00000516538 FECHP22830 423 aa7.97□□□□□ -1.13
RNU6-1046P-201ENST00000516538 Q3C1V9 767 aa7.97□□□□□ -1.13
RNU6-1046P-201ENST00000516538 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
RNU6-1046P-201ENST00000516538 GCGRP47871 477 aa7.96□□□□□ -1.14
RNU6-1046P-201ENST00000516538 MRGPRX2Q96LB1 330 aa7.96□□□□□ -1.14
RNU6-1046P-201ENST00000516538 J3QL48 77 aa7.94□□□□□ -1.14
RNU6-1046P-201ENST00000516538 GNPATO15228 680 aa7.93□□□□□ -1.14
RNU6-1046P-201ENST00000516538 RNF19BQ6ZMZ0 732 aa7.93□□□□□ -1.14
RNU6-1046P-201ENST00000516538 SMYD5Q6GMV2 418 aa7.92□□□□□ -1.14
RNU6-1046P-201ENST00000516538 HPS1Q92902 700 aa7.92□□□□□ -1.14
RNU6-1046P-201ENST00000516538 IRF7Q92985 503 aa7.92□□□□□ -1.14
RNU6-1046P-201ENST00000516538 MMP16P51512 607 aa7.91□□□□□ -1.14
RNU6-1046P-201ENST00000516538 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
RNU6-1046P-201ENST00000516538 ZSCAN1Q8NBB4 408 aa7.91□□□□□ -1.14
RNU6-1046P-201ENST00000516538 NXF1Q9UBU9 619 aaKnown RBP7.91□□□□□ -1.14
RNU6-1046P-201ENST00000516538 WNT7BP56706 349 aa7.9□□□□□ -1.14
RNU6-1046P-201ENST00000516538 NPAS3Q8IXF0 933 aa7.9□□□□□ -1.14
RNU6-1046P-201ENST00000516538 SEMA3EO15041 775 aa7.89□□□□□ -1.15
RNU6-1046P-201ENST00000516538 RC3H1Q5TC82 1133 aaKnown RBP7.89□□□□□ -1.15
RNU6-1046P-201ENST00000516538 CCDC24Q8N4L8 307 aa7.89□□□□□ -1.15
RNU6-1046P-201ENST00000516538 AMER1Q5JTC6 1135 aaPredicted RBP7.88□□□□□ -1.15
RNU6-1046P-201ENST00000516538 USB1Q9BQ65 265 aaKnown RBP7.88□□□□□ -1.15
RNU6-1046P-201ENST00000516538 DXOO77932 396 aaKnown RBP7.87□□□□□ -1.15
RNU6-1046P-201ENST00000516538 ALDH1A1P00352 501 aa7.87□□□□□ -1.15
RNU6-1046P-201ENST00000516538 GMPRP36959 345 aa7.86□□□□□ -1.15
RNU6-1046P-201ENST00000516538 NLRP7Q8WX94 980 aa7.86□□□□□ -1.15
RNU6-1046P-201ENST00000516538 TSHZ2Q9NRE2 1034 aa7.85□□□□□ -1.15
RNU6-1046P-201ENST00000516538 WASF2Q9Y6W5 498 aa7.85□□□□□ -1.15
RNU6-1046P-201ENST00000516538 RBM26Q5T8P6 1007 aaKnown RBP7.84□□□□□ -1.15
RNU6-1046P-201ENST00000516538 CAPN5O15484 640 aaPredicted RBP7.82□□□□□ -1.16
RNU6-1046P-201ENST00000516538 USP46P62068 366 aa7.82□□□□□ -1.16
RNU6-1046P-201ENST00000516538 SKOR1P84550 965 aa7.82□□□□□ -1.16
RNU6-1046P-201ENST00000516538 EHBP1Q8NDI1 1231 aa7.82□□□□□ -1.16
RNU6-1046P-201ENST00000516538 H3BM21 787 aa7.81□□□□□ -1.16
RNU6-1046P-201ENST00000516538 KDM4AO75164 1064 aa7.81□□□□□ -1.16
RNU6-1046P-201ENST00000516538 BMP1P13497 986 aa7.81□□□□□ -1.16
RNU6-1046P-201ENST00000516538 LOC100996750A0A140TA64 210 aa7.8□□□□□ -1.16
RNU6-1046P-201ENST00000516538 TESPA1A2RU30 521 aaPredicted RBP7.8□□□□□ -1.16
RNU6-1046P-201ENST00000516538 CD46P15529 392 aa7.8□□□□□ -1.16
RNU6-1046P-201ENST00000516538 KRTAP4-6Q9BYQ5 205 aa7.8□□□□□ -1.16
RNU6-1046P-201ENST00000516538 GPR37O15354 613 aa7.78□□□□□ -1.16
RNU6-1046P-201ENST00000516538 JUNDP17535 347 aa7.78□□□□□ -1.16
RNU6-1046P-201ENST00000516538 VEGFBP49765 207 aa7.78□□□□□ -1.16
RNU6-1046P-201ENST00000516538 TRIM46Q7Z4K8 759 aa7.78□□□□□ -1.16
RNU6-1046P-201ENST00000516538 PHOX2BQ99453 314 aa7.78□□□□□ -1.16
RNU6-1046P-201ENST00000516538 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
RNU6-1046P-201ENST00000516538 SCARF1Q14162 830 aa7.76□□□□□ -1.17
RNU6-1046P-201ENST00000516538 GPIHBP1Q8IV16 184 aa7.76□□□□□ -1.17
RNU6-1046P-201ENST00000516538 NUDT12Q9BQG2 462 aa7.76□□□□□ -1.17
RNU6-1046P-201ENST00000516538 ERBB4Q15303 1308 aa7.75□□□□□ -1.17
RNU6-1046P-201ENST00000516538 SIAH2O43255 324 aa7.74□□□□□ -1.17
RNU6-1046P-201ENST00000516538 HOXA2O43364 376 aa7.74□□□□□ -1.17
RNU6-1046P-201ENST00000516538 ZFP42Q96MM3 310 aa7.74□□□□□ -1.17
RNU6-1046P-201ENST00000516538 PLEKHG3A1L390 1219 aa7.73□□□□□ -1.17
RNU6-1046P-201ENST00000516538 RETREG3Q86VR2 466 aa7.72□□□□□ -1.17
RNU6-1046P-201ENST00000516538 SUZ12Q15022 739 aaKnown RBP7.71□□□□□ -1.18
RNU6-1046P-201ENST00000516538 MRPL14Q6P1L8 145 aaKnown RBP7.7□□□□□ -1.18
RNU6-1046P-201ENST00000516538 HLA-CQ95604 372 aa7.7□□□□□ -1.18
RNU6-1046P-201ENST00000516538 CCNYL3P0C7X3 344 aa7.69□□□□□ -1.18
RNU6-1046P-201ENST00000516538 VSIG8P0DPA2 414 aa7.69□□□□□ -1.18
RNU6-1046P-201ENST00000516538 MS4A1P11836 297 aa7.69□□□□□ -1.18
RNU6-1046P-201ENST00000516538 SH3BP2P78314 561 aa7.69□□□□□ -1.18
RNU6-1046P-201ENST00000516538 NUTM1Q86Y26 1132 aa7.69□□□□□ -1.18
RNU6-1046P-201ENST00000516538 RTN4Q9NQC3 1192 aaKnown RBP7.69□□□□□ -1.18
RNU6-1046P-201ENST00000516538 MDM2Q00987 491 aaPredicted RBP7.68□□□□□ -1.18
RNU6-1046P-201ENST00000516538 KCNMA1Q12791 1236 aa7.68□□□□□ -1.18
RNU6-1046P-201ENST00000516538 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
RNU6-1046P-201ENST00000516538 NNTQ13423 1086 aa7.68□□□□□ -1.18
RNU6-1046P-201ENST00000516538 RNF225M0QZC1 329 aaPredicted RBP7.67□□□□□ -1.18
RNU6-1046P-201ENST00000516538 ADH1CP00326 375 aa7.67□□□□□ -1.18
RNU6-1046P-201ENST00000516538 VARSP26640 1264 aaKnown RBP7.67□□□□□ -1.18
RNU6-1046P-201ENST00000516538 GUCA2AQ02747 115 aa7.67□□□□□ -1.18
RNU6-1046P-201ENST00000516538 PTCRAQ6ISU1 281 aaPredicted RBP7.67□□□□□ -1.18
RNU6-1046P-201ENST00000516538 PURBQ96QR8 312 aaKnown RBP7.67□□□□□ -1.18
RNU6-1046P-201ENST00000516538 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
RNU6-1046P-201ENST00000516538 SYMPKQ92797 1274 aaKnown RBP7.66□□□□□ -1.18
RNU6-1046P-201ENST00000516538 C6orf229H3BNL8 230 aa7.65□□□□□ -1.18
RNU6-1046P-201ENST00000516538 MAN1A2O60476 641 aa7.65□□□□□ -1.18
RNU6-1046P-201ENST00000516538 WDR4P57081 412 aaKnown RBP7.65□□□□□ -1.18
RNU6-1046P-201ENST00000516538 PTPRNQ16849 979 aa7.65□□□□□ -1.18
RNU6-1046P-201ENST00000516538 LINC01559Q495D7 138 aa7.65□□□□□ -1.18
RNU6-1046P-201ENST00000516538 MPNDQ8N594 471 aa7.65□□□□□ -1.18
RNU6-1046P-201ENST00000516538 UNC93B1Q9H1C4 597 aa7.65□□□□□ -1.18
RNU6-1046P-201ENST00000516538 TMEM151AQ8N4L1 468 aa7.64□□□□□ -1.19
RNU6-1046P-201ENST00000516538 KCTD17Q8N5Z5 321 aa7.64□□□□□ -1.19
RNU6-1046P-201ENST00000516538 FDX1P10109 184 aa7.63□□□□□ -1.19
RNU6-1046P-201ENST00000516538 TIMP2P16035 220 aa7.63□□□□□ -1.19
RNU6-1046P-201ENST00000516538 CLCN1P35523 988 aa7.63□□□□□ -1.19
RNU6-1046P-201ENST00000516538 KRI1Q8N9T8 703 aaKnown RBP7.63□□□□□ -1.19
RNU6-1046P-201ENST00000516538 GPCPD1Q9NPB8 672 aa7.63□□□□□ -1.19
RNU6-1046P-201ENST00000516538 TULP1O00294 542 aaPredicted RBP7.62□□□□□ -1.19
RNU6-1046P-201ENST00000516538 UPP2O95045 317 aa7.62□□□□□ -1.19
RNU6-1046P-201ENST00000516538 ZNF511Q8NB15 262 aa7.62□□□□□ -1.19
RNU6-1046P-201ENST00000516538 FAM174AQ8TBP5 190 aa7.62□□□□□ -1.19
RNU6-1046P-201ENST00000516538 BAP1Q92560 729 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms