RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
SCARNA16.1-201ENST00000516133 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
SCARNA16.1-201ENST00000516133 TRAK1Q9UPV9 953 aa16.17■□□□□ 0.18
SCARNA16.1-201ENST00000516133 AHDC1Q5TGY3 1603 aaPredicted RBP16.16■□□□□ 0.18
SCARNA16.1-201ENST00000516133 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
SCARNA16.1-201ENST00000516133 L3MBTL2Q969R5 705 aa16.16■□□□□ 0.18
SCARNA16.1-201ENST00000516133 MED1Q15648 1581 aaPredicted RBP16.16■□□□□ 0.18
SCARNA16.1-201ENST00000516133 KNDC1Q76NI1 1749 aa16.16■□□□□ 0.18
SCARNA16.1-201ENST00000516133 ADGRB1O14514 1584 aa16.15■□□□□ 0.18
SCARNA16.1-201ENST00000516133 DLC1Q96QB1 1528 aa16.14■□□□□ 0.18
SCARNA16.1-201ENST00000516133 CDC42BPGQ6DT37 1551 aa16.14■□□□□ 0.17
SCARNA16.1-201ENST00000516133 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
SCARNA16.1-201ENST00000516133 SPATA31A6Q5VVP1 1343 aa16.14■□□□□ 0.17
SCARNA16.1-201ENST00000516133 COL16A1Q07092 1604 aaPredicted RBP16.13■□□□□ 0.17
SCARNA16.1-201ENST00000516133 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
SCARNA16.1-201ENST00000516133 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
SCARNA16.1-201ENST00000516133 ILDR2Q71H61 639 aa16.11■□□□□ 0.17
SCARNA16.1-201ENST00000516133 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
SCARNA16.1-201ENST00000516133 NPHP3Q7Z494 1330 aa16.11■□□□□ 0.17
SCARNA16.1-201ENST00000516133 FOXO3O43524 673 aa16.1■□□□□ 0.17
SCARNA16.1-201ENST00000516133 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
SCARNA16.1-201ENST00000516133 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.16
SCARNA16.1-201ENST00000516133 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
SCARNA16.1-201ENST00000516133 MINK1Q8N4C8 1332 aaPredicted RBP16.07■□□□□ 0.16
SCARNA16.1-201ENST00000516133 KIAA1210Q9ULL0 1709 aa16.07■□□□□ 0.16
SCARNA16.1-201ENST00000516133 WASLO00401 505 aaPredicted RBP16.06■□□□□ 0.16
SCARNA16.1-201ENST00000516133 MEX3CQ5U5Q3 659 aaKnown RBP16.06■□□□□ 0.16
SCARNA16.1-201ENST00000516133 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
SCARNA16.1-201ENST00000516133 EIF3AQ14152 1382 aaKnown RBP16.05■□□□□ 0.16
SCARNA16.1-201ENST00000516133 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
SCARNA16.1-201ENST00000516133 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
SCARNA16.1-201ENST00000516133 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
SCARNA16.1-201ENST00000516133 RGS17Q9UGC6 210 aaPredicted RBP16.05■□□□□ 0.16
SCARNA16.1-201ENST00000516133 ANKARQ7Z5J8 1434 aa16.04■□□□□ 0.16
SCARNA16.1-201ENST00000516133 FMN2Q9NZ56 1722 aa16.04■□□□□ 0.16
SCARNA16.1-201ENST00000516133 SHPRHQ149N8 1683 aa16.04■□□□□ 0.16
SCARNA16.1-201ENST00000516133 PNPLA6Q8IY17 1366 aa16.03■□□□□ 0.16
SCARNA16.1-201ENST00000516133 PSME1Q06323 249 aa16.03■□□□□ 0.16
SCARNA16.1-201ENST00000516133 TONSLQ96HA7 1378 aa16.02■□□□□ 0.16
SCARNA16.1-201ENST00000516133 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
SCARNA16.1-201ENST00000516133 KRT28Q7Z3Y7 464 aa16.02■□□□□ 0.16
SCARNA16.1-201ENST00000516133 PCGF6Q9BYE7 350 aa16.02■□□□□ 0.16
SCARNA16.1-201ENST00000516133 ADGRB2O60241 1585 aa16.01■□□□□ 0.15
SCARNA16.1-201ENST00000516133 CENPJQ9HC77 1338 aaPredicted RBP16■□□□□ 0.15
SCARNA16.1-201ENST00000516133 PXDNQ92626 1479 aa16■□□□□ 0.15
SCARNA16.1-201ENST00000516133 SOCS7O14512 581 aa16■□□□□ 0.15
SCARNA16.1-201ENST00000516133 ZNF772Q68DY9 489 aaPredicted RBP16■□□□□ 0.15
SCARNA16.1-201ENST00000516133 CDK19Q9BWU1 502 aa16■□□□□ 0.15
SCARNA16.1-201ENST00000516133 LRP6O75581 1613 aa15.99■□□□□ 0.15
SCARNA16.1-201ENST00000516133 PMFBP1Q8TBY8 1022 aa15.99■□□□□ 0.15
SCARNA16.1-201ENST00000516133 ROCK2O75116 1388 aaKnown RBP15.99■□□□□ 0.15
SCARNA16.1-201ENST00000516133 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
SCARNA16.1-201ENST00000516133 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
SCARNA16.1-201ENST00000516133 NBPF8Q3BBV2 869 aa15.98■□□□□ 0.15
SCARNA16.1-201ENST00000516133 POTEAQ6S8J7 498 aa15.98■□□□□ 0.15
SCARNA16.1-201ENST00000516133 ARHGEF28Q8N1W1 1705 aaKnown RBP15.98■□□□□ 0.15
SCARNA16.1-201ENST00000516133 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
SCARNA16.1-201ENST00000516133 PRR36Q9H6K5 1346 aa15.97■□□□□ 0.15
SCARNA16.1-201ENST00000516133 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
SCARNA16.1-201ENST00000516133 TULP4Q9NRJ4 1543 aa15.97■□□□□ 0.15
SCARNA16.1-201ENST00000516133 ADAMTS2O95450 1211 aa15.96■□□□□ 0.15
SCARNA16.1-201ENST00000516133 NGDNQ8NEJ9 315 aaKnown RBP15.96■□□□□ 0.15
SCARNA16.1-201ENST00000516133 NGLY1Q96IV0 654 aa15.96■□□□□ 0.15
SCARNA16.1-201ENST00000516133 C8orf37Q96NL8 207 aa15.96■□□□□ 0.15
SCARNA16.1-201ENST00000516133 GPRASP1Q5JY77 1395 aa15.96■□□□□ 0.15
SCARNA16.1-201ENST00000516133 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
SCARNA16.1-201ENST00000516133 RGPD8O14715 1765 aaPredicted RBP15.95■□□□□ 0.14
SCARNA16.1-201ENST00000516133 SBNO1A3KN83 1393 aa15.95■□□□□ 0.14
SCARNA16.1-201ENST00000516133 SRPK2P78362 688 aaKnown RBP15.94■□□□□ 0.14
SCARNA16.1-201ENST00000516133 CARD11Q9BXL7 1154 aa15.94■□□□□ 0.14
SCARNA16.1-201ENST00000516133 TRPM1Q7Z4N2 1603 aa15.94■□□□□ 0.14
SCARNA16.1-201ENST00000516133 LMOD2Q6P5Q4 547 aa15.93■□□□□ 0.14
SCARNA16.1-201ENST00000516133 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
SCARNA16.1-201ENST00000516133 USP32Q8NFA0 1604 aa15.93■□□□□ 0.14
SCARNA16.1-201ENST00000516133 AFF2P51816 1311 aa15.93■□□□□ 0.14
SCARNA16.1-201ENST00000516133 ARHGEF10O15013 1369 aa15.92■□□□□ 0.14
SCARNA16.1-201ENST00000516133 PLEKHG3A1L390 1219 aa15.92■□□□□ 0.14
SCARNA16.1-201ENST00000516133 EVC2Q86UK5 1308 aa15.92■□□□□ 0.14
SCARNA16.1-201ENST00000516133 COL22A1Q8NFW1 1626 aaPredicted RBP15.91■□□□□ 0.14
SCARNA16.1-201ENST00000516133 TNS3Q68CZ2 1445 aa15.91■□□□□ 0.14
SCARNA16.1-201ENST00000516133 ATP7BP35670 1465 aa15.91■□□□□ 0.14
SCARNA16.1-201ENST00000516133 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
SCARNA16.1-201ENST00000516133 FNBP4Q8N3X1 1017 aaPredicted RBP15.9■□□□□ 0.14
SCARNA16.1-201ENST00000516133 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
SCARNA16.1-201ENST00000516133 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
SCARNA16.1-201ENST00000516133 RXRBP28702 533 aa15.89■□□□□ 0.13
SCARNA16.1-201ENST00000516133 QTRT2Q9H974 415 aaKnown RBP15.89■□□□□ 0.13
SCARNA16.1-201ENST00000516133 USP21Q9UK80 565 aa15.88■□□□□ 0.13
SCARNA16.1-201ENST00000516133 ACEP12821 1306 aa15.88■□□□□ 0.13
SCARNA16.1-201ENST00000516133 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
SCARNA16.1-201ENST00000516133 RALGAPBQ86X10 1494 aa15.87■□□□□ 0.13
SCARNA16.1-201ENST00000516133 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
SCARNA16.1-201ENST00000516133 CABLES1Q8TDN4 633 aa15.86■□□□□ 0.13
SCARNA16.1-201ENST00000516133 CABP1Q9NZU7 370 aa15.86■□□□□ 0.13
SCARNA16.1-201ENST00000516133 ITSN1Q15811 1721 aa15.85■□□□□ 0.13
SCARNA16.1-201ENST00000516133 RBM6P78332 1123 aaKnown RBP15.85■□□□□ 0.13
SCARNA16.1-201ENST00000516133 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
SCARNA16.1-201ENST00000516133 TRPC5Q9UL62 973 aaPredicted RBP15.85■□□□□ 0.13
SCARNA16.1-201ENST00000516133 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
SCARNA16.1-201ENST00000516133 SBNO2Q9Y2G9 1366 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms