RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 KNDC1Q76NI1 1749 aa28.7■■■□□ 2.19
DDR1-280ENST00000515881 LRRC59Q96AG4 307 aaKnown RBP28.7■■■□□ 2.18
DDR1-280ENST00000515881 ORAI2Q96SN7 254 aa28.7■■■□□ 2.18
DDR1-280ENST00000515881 POTEAQ6S8J7 498 aa28.69■■■□□ 2.18
DDR1-280ENST00000515881 PLEKHH1Q9ULM0 1364 aa28.69■■■□□ 2.18
DDR1-280ENST00000515881 LAMC1P11047 1609 aa28.69■■■□□ 2.18
DDR1-280ENST00000515881 DHX57Q6P158 1386 aaKnown RBP28.66■■■□□ 2.18
DDR1-280ENST00000515881 MEX3CQ5U5Q3 659 aaKnown RBP28.66■■■□□ 2.18
DDR1-280ENST00000515881 SIRT1Q96EB6 747 aa28.66■■■□□ 2.18
DDR1-280ENST00000515881 PNPLA6Q8IY17 1366 aa28.63■■■□□ 2.17
DDR1-280ENST00000515881 NUTM2BA6NNL0 878 aaPredicted RBP28.63■■■□□ 2.17
DDR1-280ENST00000515881 NUTM2EB1AL46 878 aaPredicted RBP28.63■■■□□ 2.17
DDR1-280ENST00000515881 NUTM2AQ8IVF1 878 aaPredicted RBP28.63■■■□□ 2.17
DDR1-280ENST00000515881 DCAF11Q8TEB1 546 aa28.62■■■□□ 2.17
DDR1-280ENST00000515881 SOS2Q07890 1332 aaPredicted RBP28.62■■■□□ 2.17
DDR1-280ENST00000515881 ESCO1Q5FWF5 840 aa28.61■■■□□ 2.17
DDR1-280ENST00000515881 KDM2AQ9Y2K7 1162 aa28.6■■■□□ 2.17
DDR1-280ENST00000515881 STAC3Q96MF2 364 aa28.59■■■□□ 2.17
DDR1-280ENST00000515881 NUTM2FA1L443 756 aa28.57■■■□□ 2.16
DDR1-280ENST00000515881 ADGRB1O14514 1584 aa28.57■■■□□ 2.16
DDR1-280ENST00000515881 ZNF772Q68DY9 489 aaPredicted RBP28.56■■■□□ 2.16
DDR1-280ENST00000515881 NPHP3Q7Z494 1330 aa28.56■■■□□ 2.16
DDR1-280ENST00000515881 PRAM1Q96QH2 718 aa28.56■■■□□ 2.16
DDR1-280ENST00000515881 DLC1Q96QB1 1528 aa28.55■■■□□ 2.16
DDR1-280ENST00000515881 FMN2Q9NZ56 1722 aa28.52■■■□□ 2.16
DDR1-280ENST00000515881 FOXO3O43524 673 aa28.51■■■□□ 2.15
DDR1-280ENST00000515881 SAFB2Q14151 953 aaKnown RBP eCLIP28.51■■■□□ 2.15
DDR1-280ENST00000515881 PXDNQ92626 1479 aa28.51■■■□□ 2.15
DDR1-280ENST00000515881 POGKQ9P215 609 aa28.5■■■□□ 2.15
DDR1-280ENST00000515881 TRAK1Q9UPV9 953 aa28.48■■■□□ 2.15
DDR1-280ENST00000515881 AFF2P51816 1311 aa28.47■■■□□ 2.15
DDR1-280ENST00000515881 XPCQ01831 940 aaPredicted RBP28.47■■■□□ 2.15
DDR1-280ENST00000515881 C8orf37Q96NL8 207 aa28.45■■■□□ 2.14
DDR1-280ENST00000515881 ADAMTS2O95450 1211 aa28.44■■■□□ 2.14
DDR1-280ENST00000515881 KIF1AQ12756 1690 aa28.43■■■□□ 2.14
DDR1-280ENST00000515881 COL22A1Q8NFW1 1626 aaPredicted RBP28.43■■■□□ 2.14
DDR1-280ENST00000515881 ADGRB2O60241 1585 aa28.42■■■□□ 2.14
DDR1-280ENST00000515881 PHF8Q9UPP1 1060 aa28.4■■■□□ 2.14
DDR1-280ENST00000515881 RXRBP28702 533 aa28.39■■■□□ 2.14
DDR1-280ENST00000515881 ANKARQ7Z5J8 1434 aa28.39■■■□□ 2.14
DDR1-280ENST00000515881 NGLY1Q96IV0 654 aa28.38■■■□□ 2.13
DDR1-280ENST00000515881 HIRIP3Q9BW71 556 aaPredicted RBP28.38■■■□□ 2.13
DDR1-280ENST00000515881 MINK1Q8N4C8 1332 aaPredicted RBP28.38■■■□□ 2.13
DDR1-280ENST00000515881 KRT28Q7Z3Y7 464 aa28.37■■■□□ 2.13
DDR1-280ENST00000515881 SPATA31A3Q5VYP0 1347 aa28.36■■■□□ 2.13
DDR1-280ENST00000515881 EIF3AQ14152 1382 aaKnown RBP28.34■■■□□ 2.13
DDR1-280ENST00000515881 USP32Q8NFA0 1604 aa28.33■■■□□ 2.13
DDR1-280ENST00000515881 QTRT2Q9H974 415 aaKnown RBP28.32■■■□□ 2.12
DDR1-280ENST00000515881 CDK12Q9NYV4 1490 aaPredicted RBP28.32■■■□□ 2.12
DDR1-280ENST00000515881 WASLO00401 505 aaPredicted RBP28.31■■■□□ 2.12
DDR1-280ENST00000515881 PSME1Q06323 249 aa28.31■■■□□ 2.12
DDR1-280ENST00000515881 RGPD8O14715 1765 aaPredicted RBP28.3■■■□□ 2.12
DDR1-280ENST00000515881 TULP4Q9NRJ4 1543 aa28.3■■■□□ 2.12
DDR1-280ENST00000515881 FNBP4Q8N3X1 1017 aaPredicted RBP28.3■■■□□ 2.12
DDR1-280ENST00000515881 ARHGEF28Q8N1W1 1705 aaKnown RBP28.29■■■□□ 2.12
DDR1-280ENST00000515881 KIAA1210Q9ULL0 1709 aa28.29■■■□□ 2.12
DDR1-280ENST00000515881 TNS3Q68CZ2 1445 aa28.29■■■□□ 2.12
DDR1-280ENST00000515881 PRR36Q9H6K5 1346 aa28.29■■■□□ 2.12
DDR1-280ENST00000515881 PMFBP1Q8TBY8 1022 aa28.29■■■□□ 2.12
DDR1-280ENST00000515881 SBNO1A3KN83 1393 aa28.28■■■□□ 2.12
DDR1-280ENST00000515881 USP21Q9UK80 565 aa28.28■■■□□ 2.12
DDR1-280ENST00000515881 RBM6P78332 1123 aaKnown RBP28.27■■■□□ 2.12
DDR1-280ENST00000515881 NBPF1Q3BBV0 1214 aa28.27■■■□□ 2.12
DDR1-280ENST00000515881 L3MBTL2Q969R5 705 aa28.25■■■□□ 2.11
DDR1-280ENST00000515881 SIN3AQ96ST3 1273 aa28.25■■■□□ 2.11
DDR1-280ENST00000515881 TRPC5Q9UL62 973 aaPredicted RBP28.23■■■□□ 2.11
DDR1-280ENST00000515881 RGS12O14924 1447 aa28.22■■■□□ 2.11
DDR1-280ENST00000515881 ARHGEF10O15013 1369 aa28.22■■■□□ 2.11
DDR1-280ENST00000515881 ATRNO75882 1429 aa28.2■■■□□ 2.11
DDR1-280ENST00000515881 LMOD2Q6P5Q4 547 aa28.2■■■□□ 2.1
DDR1-280ENST00000515881 GPRASP1Q5JY77 1395 aa28.2■■■□□ 2.1
DDR1-280ENST00000515881 ATP7BP35670 1465 aa28.2■■■□□ 2.1
DDR1-280ENST00000515881 BCL9LQ86UU0 1499 aa28.2■■■□□ 2.1
DDR1-280ENST00000515881 NEUROD1Q13562 356 aa28.19■■■□□ 2.1
DDR1-280ENST00000515881 CABLES1Q8TDN4 633 aa28.18■■■□□ 2.1
DDR1-280ENST00000515881 NUDT16Q96DE0 195 aaKnown RBP28.18■■■□□ 2.1
DDR1-280ENST00000515881 MARF1Q9Y4F3 1742 aaKnown RBP28.18■■■□□ 2.1
DDR1-280ENST00000515881 HAP1P54257 671 aaPredicted RBP28.17■■■□□ 2.1
DDR1-280ENST00000515881 CDK19Q9BWU1 502 aa28.17■■■□□ 2.1
DDR1-280ENST00000515881 NGDNQ8NEJ9 315 aaKnown RBP28.16■■■□□ 2.1
DDR1-280ENST00000515881 PLEKHG5O94827 1062 aa28.14■■■□□ 2.1
DDR1-280ENST00000515881 UPF1Q92900 1129 aaKnown RBP eCLIP28.14■■■□□ 2.1
DDR1-280ENST00000515881 TRPM3Q9HCF6 1732 aaPredicted RBP28.14■■■□□ 2.1
DDR1-280ENST00000515881 CENPJQ9HC77 1338 aaPredicted RBP28.14■■■□□ 2.09
DDR1-280ENST00000515881 SLIT2O94813 1529 aa28.13■■■□□ 2.09
DDR1-280ENST00000515881 UNC5CLQ8IV45 518 aa28.11■■■□□ 2.09
DDR1-280ENST00000515881 ITSN1Q15811 1721 aa28.09■■■□□ 2.09
DDR1-280ENST00000515881 TRIM26Q12899 539 aaPredicted RBP28.09■■■□□ 2.09
DDR1-280ENST00000515881 CCDC61Q9Y6R9 512 aa28.09■■■□□ 2.09
DDR1-280ENST00000515881 ABCA3Q99758 1704 aa28.09■■■□□ 2.09
DDR1-280ENST00000515881 ALS2Q96Q42 1657 aa28.08■■■□□ 2.09
DDR1-280ENST00000515881 PAK3O75914 559 aaPredicted RBP28.07■■■□□ 2.08
DDR1-280ENST00000515881 GJD4Q96KN9 370 aaPredicted RBP28.07■■■□□ 2.08
DDR1-280ENST00000515881 TRPM1Q7Z4N2 1603 aa28.07■■■□□ 2.08
DDR1-280ENST00000515881 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.06■■■□□ 2.08
DDR1-280ENST00000515881 POLR3AO14802 1390 aaPredicted RBP28.06■■■□□ 2.08
DDR1-280ENST00000515881 TOPAZ1Q8N9V7 1692 aa28.05■■■□□ 2.08
DDR1-280ENST00000515881 ROCK2O75116 1388 aaKnown RBP28.04■■■□□ 2.08
DDR1-280ENST00000515881 PLEKHG3A1L390 1219 aa28.04■■■□□ 2.08
DDR1-280ENST00000515881 SRPK2P78362 688 aaKnown RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms