RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 LRP6O75581 1613 aa21.44■■□□□ 1.02
PDCD6-211ENST00000515587 TRAK1Q9UPV9 953 aa21.43■■□□□ 1.02
PDCD6-211ENST00000515587 ROBO2Q9HCK4 1378 aa21.43■■□□□ 1.02
PDCD6-211ENST00000515587 NCOA3Q9Y6Q9 1424 aa21.43■■□□□ 1.02
PDCD6-211ENST00000515587 DLC1Q96QB1 1528 aa21.43■■□□□ 1.02
PDCD6-211ENST00000515587 ZNF772Q68DY9 489 aaPredicted RBP21.42■■□□□ 1.02
PDCD6-211ENST00000515587 SIRT1Q96EB6 747 aa21.42■■□□□ 1.02
PDCD6-211ENST00000515587 SRCAPQ6ZRS2 3230 aa21.41■■□□□ 1.02
PDCD6-211ENST00000515587 ARHGEF28Q8N1W1 1705 aaKnown RBP21.41■■□□□ 1.02
PDCD6-211ENST00000515587 MEX3CQ5U5Q3 659 aaKnown RBP21.4■■□□□ 1.02
PDCD6-211ENST00000515587 POGKQ9P215 609 aa21.4■■□□□ 1.02
PDCD6-211ENST00000515587 SLAIN2Q9P270 581 aa21.4■■□□□ 1.02
PDCD6-211ENST00000515587 PHLPP1O60346 1717 aa21.39■■□□□ 1.01
PDCD6-211ENST00000515587 CARD11Q9BXL7 1154 aa21.39■■□□□ 1.01
PDCD6-211ENST00000515587 MSH6P52701 1360 aa21.38■■□□□ 1.01
PDCD6-211ENST00000515587 GPRASP1Q5JY77 1395 aa21.38■■□□□ 1.01
PDCD6-211ENST00000515587 WAPLQ7Z5K2 1190 aa21.37■■□□□ 1.01
PDCD6-211ENST00000515587 PRAM1Q96QH2 718 aa21.37■■□□□ 1.01
PDCD6-211ENST00000515587 NALCNQ8IZF0 1738 aa21.37■■□□□ 1.01
PDCD6-211ENST00000515587 EIF3AQ14152 1382 aaKnown RBP21.36■■□□□ 1.01
PDCD6-211ENST00000515587 RXRBP28702 533 aa21.36■■□□□ 1.01
PDCD6-211ENST00000515587 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.35■■□□□ 1.01
PDCD6-211ENST00000515587 SPATA31A6Q5VVP1 1343 aa21.35■■□□□ 1.01
PDCD6-211ENST00000515587 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
PDCD6-211ENST00000515587 C19orf44Q9H6X5 657 aa21.34■■□□□ 1.01
PDCD6-211ENST00000515587 COL16A1Q07092 1604 aaPredicted RBP21.33■■□□□ 1.01
PDCD6-211ENST00000515587 ATF3P18847 181 aa21.33■■□□□ 1.01
PDCD6-211ENST00000515587 SAFB2Q14151 953 aaKnown RBP eCLIP21.33■■□□□ 1.01
PDCD6-211ENST00000515587 PLEKHH1Q9ULM0 1364 aa21.33■■□□□ 1
PDCD6-211ENST00000515587 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
PDCD6-211ENST00000515587 DCCP43146 1447 aa21.31■■□□□ 1
PDCD6-211ENST00000515587 CENPJQ9HC77 1338 aaPredicted RBP21.3■■□□□ 1
PDCD6-211ENST00000515587 CADPS2Q86UW7 1296 aa21.3■■□□□ 1
PDCD6-211ENST00000515587 CDC42BPGQ6DT37 1551 aa21.28■■□□□ 1
PDCD6-211ENST00000515587 MINK1Q8N4C8 1332 aaPredicted RBP21.28■■□□□ 1
PDCD6-211ENST00000515587 CDK12Q9NYV4 1490 aaPredicted RBP21.27■■□□□ 1
PDCD6-211ENST00000515587 ZEB1P37275 1124 aaPredicted RBP21.27■■□□□ 1
PDCD6-211ENST00000515587 ADGRB2O60241 1585 aa21.27■□□□□ 0.99
PDCD6-211ENST00000515587 NUTM2BA6NNL0 878 aaPredicted RBP21.25■□□□□ 0.99
PDCD6-211ENST00000515587 NUTM2EB1AL46 878 aaPredicted RBP21.25■□□□□ 0.99
PDCD6-211ENST00000515587 NUTM2AQ8IVF1 878 aaPredicted RBP21.25■□□□□ 0.99
PDCD6-211ENST00000515587 USP47Q96K76 1375 aa21.24■□□□□ 0.99
PDCD6-211ENST00000515587 FMN2Q9NZ56 1722 aa21.24■□□□□ 0.99
PDCD6-211ENST00000515587 HIRIP3Q9BW71 556 aaPredicted RBP21.23■□□□□ 0.99
PDCD6-211ENST00000515587 AFF2P51816 1311 aa21.23■□□□□ 0.99
PDCD6-211ENST00000515587 RGS12O14924 1447 aa21.21■□□□□ 0.99
PDCD6-211ENST00000515587 ST20-MTHFSA0A0A6YYL1 179 aa21.19■□□□□ 0.98
PDCD6-211ENST00000515587 WASLO00401 505 aaPredicted RBP21.19■□□□□ 0.98
PDCD6-211ENST00000515587 SLC24A1O60721 1099 aa21.19■□□□□ 0.98
PDCD6-211ENST00000515587 MST1RQ04912 1400 aa21.19■□□□□ 0.98
PDCD6-211ENST00000515587 EIF4G2P78344 907 aaKnown RBP eCLIP21.18■□□□□ 0.98
PDCD6-211ENST00000515587 EVC2Q86UK5 1308 aa21.18■□□□□ 0.98
PDCD6-211ENST00000515587 SBNO2Q9Y2G9 1366 aa21.18■□□□□ 0.98
PDCD6-211ENST00000515587 AHDC1Q5TGY3 1603 aaPredicted RBP21.18■□□□□ 0.98
PDCD6-211ENST00000515587 SHPRHQ149N8 1683 aa21.18■□□□□ 0.98
PDCD6-211ENST00000515587 RGPD8O14715 1765 aaPredicted RBP21.15■□□□□ 0.98
PDCD6-211ENST00000515587 TULP4Q9NRJ4 1543 aa21.15■□□□□ 0.98
PDCD6-211ENST00000515587 C1orf167Q5SNV9 1468 aa21.15■□□□□ 0.98
PDCD6-211ENST00000515587 ANKARQ7Z5J8 1434 aa21.15■□□□□ 0.98
PDCD6-211ENST00000515587 NUTM2FA1L443 756 aa21.15■□□□□ 0.98
PDCD6-211ENST00000515587 CDK19Q9BWU1 502 aa21.15■□□□□ 0.98
PDCD6-211ENST00000515587 SRPK2P78362 688 aaKnown RBP21.14■□□□□ 0.97
PDCD6-211ENST00000515587 ITSN1Q15811 1721 aa21.14■□□□□ 0.97
PDCD6-211ENST00000515587 RBM6P78332 1123 aaKnown RBP21.13■□□□□ 0.97
PDCD6-211ENST00000515587 QTRT2Q9H974 415 aaKnown RBP21.13■□□□□ 0.97
PDCD6-211ENST00000515587 USP32Q8NFA0 1604 aa21.11■□□□□ 0.97
PDCD6-211ENST00000515587 HSPA5P11021 654 aaKnown RBP21.11■□□□□ 0.97
PDCD6-211ENST00000515587 ESCO1Q5FWF5 840 aa21.11■□□□□ 0.97
PDCD6-211ENST00000515587 BRINP3Q76B58 766 aa21.11■□□□□ 0.97
PDCD6-211ENST00000515587 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
PDCD6-211ENST00000515587 KIF1AQ12756 1690 aa21.1■□□□□ 0.97
PDCD6-211ENST00000515587 C8orf37Q96NL8 207 aa21.1■□□□□ 0.97
PDCD6-211ENST00000515587 TESK2Q96S53 571 aa21.1■□□□□ 0.97
PDCD6-211ENST00000515587 TMF1P82094 1093 aa21.09■□□□□ 0.97
PDCD6-211ENST00000515587 NUDT16Q96DE0 195 aaKnown RBP21.09■□□□□ 0.97
PDCD6-211ENST00000515587 ORAI2Q96SN7 254 aa21.08■□□□□ 0.97
PDCD6-211ENST00000515587 CABP2Q9NPB3 220 aa21.08■□□□□ 0.97
PDCD6-211ENST00000515587 ATP7BP35670 1465 aa21.07■□□□□ 0.96
PDCD6-211ENST00000515587 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
PDCD6-211ENST00000515587 TOPAZ1Q8N9V7 1692 aa21.06■□□□□ 0.96
PDCD6-211ENST00000515587 PRR36Q9H6K5 1346 aa21.05■□□□□ 0.96
PDCD6-211ENST00000515587 PHF8Q9UPP1 1060 aa21.05■□□□□ 0.96
PDCD6-211ENST00000515587 CCDC61Q9Y6R9 512 aa21.05■□□□□ 0.96
PDCD6-211ENST00000515587 ATAD2Q6PL18 1390 aa21.05■□□□□ 0.96
PDCD6-211ENST00000515587 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
PDCD6-211ENST00000515587 PUS7Q96PZ0 661 aaKnown RBP21.04■□□□□ 0.96
PDCD6-211ENST00000515587 PPIP5K1Q6PFW1 1433 aa21.02■□□□□ 0.96
PDCD6-211ENST00000515587 PMFBP1Q8TBY8 1022 aa21.01■□□□□ 0.95
PDCD6-211ENST00000515587 NPHP3Q7Z494 1330 aa21.01■□□□□ 0.95
PDCD6-211ENST00000515587 NGDNQ8NEJ9 315 aaKnown RBP21■□□□□ 0.95
PDCD6-211ENST00000515587 FOXO3O43524 673 aa20.99■□□□□ 0.95
PDCD6-211ENST00000515587 DDX17Q92841 729 aaKnown RBP20.99■□□□□ 0.95
PDCD6-211ENST00000515587 NGLY1Q96IV0 654 aa20.99■□□□□ 0.95
PDCD6-211ENST00000515587 PLEKHG3A1L390 1219 aa20.98■□□□□ 0.95
PDCD6-211ENST00000515587 ADAMTS2O95450 1211 aa20.98■□□□□ 0.95
PDCD6-211ENST00000515587 PSME1Q06323 249 aa20.98■□□□□ 0.95
PDCD6-211ENST00000515587 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
PDCD6-211ENST00000515587 LRRC59Q96AG4 307 aaKnown RBP20.98■□□□□ 0.95
PDCD6-211ENST00000515587 PNPLA6Q8IY17 1366 aa20.97■□□□□ 0.95
PDCD6-211ENST00000515587 CABP1Q9NZU7 370 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms