RNA–Protein interactions for RNA: ENST00000514682.5

RPS3A-212, Transcript of ribosomal protein S3A, humanhuman

TSL 5 BASIC

Gene RPS3A, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-212ENST00000514682 C1orf167Q5SNV9 1468 aa23.74■■□□□ 1.39
RPS3A-212ENST00000514682 PHLPP1O60346 1717 aa23.73■■□□□ 1.39
RPS3A-212ENST00000514682 BRINP3Q76B58 766 aa23.73■■□□□ 1.39
RPS3A-212ENST00000514682 PRAM1Q96QH2 718 aa23.73■■□□□ 1.39
RPS3A-212ENST00000514682 TRAK1Q9UPV9 953 aa23.71■■□□□ 1.39
RPS3A-212ENST00000514682 ARHGEF28Q8N1W1 1705 aaKnown RBP23.7■■□□□ 1.39
RPS3A-212ENST00000514682 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.39
RPS3A-212ENST00000514682 TONSLQ96HA7 1378 aa23.7■■□□□ 1.38
RPS3A-212ENST00000514682 POGKQ9P215 609 aa23.7■■□□□ 1.38
RPS3A-212ENST00000514682 ADGRB2O60241 1585 aa23.69■■□□□ 1.38
RPS3A-212ENST00000514682 FMN2Q9NZ56 1722 aa23.68■■□□□ 1.38
RPS3A-212ENST00000514682 SAFB2Q14151 953 aaKnown RBP eCLIP23.68■■□□□ 1.38
RPS3A-212ENST00000514682 NHSL1Q5SYE7 1610 aa23.68■■□□□ 1.38
RPS3A-212ENST00000514682 TRPM1Q7Z4N2 1603 aa23.67■■□□□ 1.38
RPS3A-212ENST00000514682 MED1Q15648 1581 aaPredicted RBP23.65■■□□□ 1.38
RPS3A-212ENST00000514682 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
RPS3A-212ENST00000514682 ORAI2Q96SN7 254 aa23.61■■□□□ 1.37
RPS3A-212ENST00000514682 JCADQ9P266 1359 aa23.61■■□□□ 1.37
RPS3A-212ENST00000514682 MINK1Q8N4C8 1332 aaPredicted RBP23.6■■□□□ 1.37
RPS3A-212ENST00000514682 NUTM2FA1L443 756 aa23.6■■□□□ 1.37
RPS3A-212ENST00000514682 ROCK2O75116 1388 aaKnown RBP23.6■■□□□ 1.37
RPS3A-212ENST00000514682 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
RPS3A-212ENST00000514682 DISP3Q9P2K9 1392 aa23.58■■□□□ 1.37
RPS3A-212ENST00000514682 ESCO1Q5FWF5 840 aa23.58■■□□□ 1.37
RPS3A-212ENST00000514682 HIRIP3Q9BW71 556 aaPredicted RBP23.58■■□□□ 1.37
RPS3A-212ENST00000514682 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.36
RPS3A-212ENST00000514682 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
RPS3A-212ENST00000514682 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
RPS3A-212ENST00000514682 NBPF8Q3BBV2 869 aa23.57■■□□□ 1.36
RPS3A-212ENST00000514682 DDX17Q92841 729 aaKnown RBP23.57■■□□□ 1.36
RPS3A-212ENST00000514682 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
RPS3A-212ENST00000514682 RALGAPBQ86X10 1494 aa23.56■■□□□ 1.36
RPS3A-212ENST00000514682 TULP4Q9NRJ4 1543 aa23.55■■□□□ 1.36
RPS3A-212ENST00000514682 USP32Q8NFA0 1604 aa23.55■■□□□ 1.36
RPS3A-212ENST00000514682 GPRASP1Q5JY77 1395 aa23.54■■□□□ 1.36
RPS3A-212ENST00000514682 NPHP3Q7Z494 1330 aa23.53■■□□□ 1.36
RPS3A-212ENST00000514682 CENPJQ9HC77 1338 aaPredicted RBP23.53■■□□□ 1.36
RPS3A-212ENST00000514682 QRICH2Q9H0J4 1663 aa23.52■■□□□ 1.36
RPS3A-212ENST00000514682 WASLO00401 505 aaPredicted RBP23.52■■□□□ 1.36
RPS3A-212ENST00000514682 PXDNQ92626 1479 aa23.51■■□□□ 1.35
RPS3A-212ENST00000514682 SOS2Q07890 1332 aaPredicted RBP23.51■■□□□ 1.35
RPS3A-212ENST00000514682 RGPD8O14715 1765 aaPredicted RBP23.5■■□□□ 1.35
RPS3A-212ENST00000514682 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
RPS3A-212ENST00000514682 LRRC59Q96AG4 307 aaKnown RBP23.49■■□□□ 1.35
RPS3A-212ENST00000514682 SPATA31A6Q5VVP1 1343 aa23.49■■□□□ 1.35
RPS3A-212ENST00000514682 ATP7BP35670 1465 aa23.49■■□□□ 1.35
RPS3A-212ENST00000514682 FOXO3O43524 673 aa23.48■■□□□ 1.35
RPS3A-212ENST00000514682 PHF8Q9UPP1 1060 aa23.48■■□□□ 1.35
RPS3A-212ENST00000514682 PRR36Q9H6K5 1346 aa23.48■■□□□ 1.35
RPS3A-212ENST00000514682 PNPLA6Q8IY17 1366 aa23.48■■□□□ 1.35
RPS3A-212ENST00000514682 LRP6O75581 1613 aa23.46■■□□□ 1.35
RPS3A-212ENST00000514682 XPCQ01831 940 aaPredicted RBP23.45■■□□□ 1.34
RPS3A-212ENST00000514682 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
RPS3A-212ENST00000514682 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
RPS3A-212ENST00000514682 ITSN1Q15811 1721 aa23.45■■□□□ 1.34
RPS3A-212ENST00000514682 CDK19Q9BWU1 502 aa23.43■■□□□ 1.34
RPS3A-212ENST00000514682 TOPAZ1Q8N9V7 1692 aa23.43■■□□□ 1.34
RPS3A-212ENST00000514682 TIMELESSQ9UNS1 1208 aa23.42■■□□□ 1.34
RPS3A-212ENST00000514682 COL22A1Q8NFW1 1626 aaPredicted RBP23.41■■□□□ 1.34
RPS3A-212ENST00000514682 PMFBP1Q8TBY8 1022 aa23.4■■□□□ 1.34
RPS3A-212ENST00000514682 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
RPS3A-212ENST00000514682 KRT28Q7Z3Y7 464 aa23.38■■□□□ 1.33
RPS3A-212ENST00000514682 TNS3Q68CZ2 1445 aa23.38■■□□□ 1.33
RPS3A-212ENST00000514682 NUTM2BA6NNL0 878 aaPredicted RBP23.37■■□□□ 1.33
RPS3A-212ENST00000514682 NUTM2EB1AL46 878 aaPredicted RBP23.37■■□□□ 1.33
RPS3A-212ENST00000514682 SRPK2P78362 688 aaKnown RBP23.37■■□□□ 1.33
RPS3A-212ENST00000514682 MEX3CQ5U5Q3 659 aaKnown RBP23.37■■□□□ 1.33
RPS3A-212ENST00000514682 NUTM2AQ8IVF1 878 aaPredicted RBP23.37■■□□□ 1.33
RPS3A-212ENST00000514682 SBNO2Q9Y2G9 1366 aa23.37■■□□□ 1.33
RPS3A-212ENST00000514682 SBNO1A3KN83 1393 aa23.36■■□□□ 1.33
RPS3A-212ENST00000514682 SPATA31A3Q5VYP0 1347 aa23.35■■□□□ 1.33
RPS3A-212ENST00000514682 PSME1Q06323 249 aa23.35■■□□□ 1.33
RPS3A-212ENST00000514682 EVC2Q86UK5 1308 aa23.34■■□□□ 1.33
RPS3A-212ENST00000514682 NGDNQ8NEJ9 315 aaKnown RBP23.34■■□□□ 1.33
RPS3A-212ENST00000514682 CABP2Q9NPB3 220 aa23.34■■□□□ 1.33
RPS3A-212ENST00000514682 TRPM3Q9HCF6 1732 aaPredicted RBP23.33■■□□□ 1.33
RPS3A-212ENST00000514682 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
RPS3A-212ENST00000514682 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
RPS3A-212ENST00000514682 POLR3AO14802 1390 aaPredicted RBP23.31■■□□□ 1.32
RPS3A-212ENST00000514682 ARHGEF10O15013 1369 aa23.3■■□□□ 1.32
RPS3A-212ENST00000514682 RGS17Q9UGC6 210 aaPredicted RBP23.29■■□□□ 1.32
RPS3A-212ENST00000514682 USP47Q96K76 1375 aa23.28■■□□□ 1.32
RPS3A-212ENST00000514682 PLEKHG3A1L390 1219 aa23.28■■□□□ 1.32
RPS3A-212ENST00000514682 ILDR2Q71H61 639 aa23.28■■□□□ 1.32
RPS3A-212ENST00000514682 ALS2Q96Q42 1657 aa23.28■■□□□ 1.32
RPS3A-212ENST00000514682 ACEP12821 1306 aa23.27■■□□□ 1.32
RPS3A-212ENST00000514682 ADAMTS2O95450 1211 aa23.26■■□□□ 1.31
RPS3A-212ENST00000514682 LMOD2Q6P5Q4 547 aa23.26■■□□□ 1.31
RPS3A-212ENST00000514682 ATAD2Q6PL18 1390 aa23.26■■□□□ 1.31
RPS3A-212ENST00000514682 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
RPS3A-212ENST00000514682 C8orf37Q96NL8 207 aa23.24■■□□□ 1.31
RPS3A-212ENST00000514682 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
RPS3A-212ENST00000514682 PAK3O75914 559 aaPredicted RBP23.22■■□□□ 1.31
RPS3A-212ENST00000514682 CABP1Q9NZU7 370 aa23.22■■□□□ 1.31
RPS3A-212ENST00000514682 AFF2P51816 1311 aa23.22■■□□□ 1.31
RPS3A-212ENST00000514682 TESK2Q96S53 571 aa23.21■■□□□ 1.31
RPS3A-212ENST00000514682 MARF1Q9Y4F3 1742 aaKnown RBP23.21■■□□□ 1.31
RPS3A-212ENST00000514682 ZNF772Q68DY9 489 aaPredicted RBP23.2■■□□□ 1.3
RPS3A-212ENST00000514682 PLEKHG5O94827 1062 aa23.19■■□□□ 1.3
RPS3A-212ENST00000514682 HAP1P54257 671 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms