RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
DDR1-275ENST00000514434 NUTM2BA6NNL0 878 aaPredicted RBP19.05■□□□□ 0.64
DDR1-275ENST00000514434 NUTM2EB1AL46 878 aaPredicted RBP19.05■□□□□ 0.64
DDR1-275ENST00000514434 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
DDR1-275ENST00000514434 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
DDR1-275ENST00000514434 NUTM2AQ8IVF1 878 aaPredicted RBP19.05■□□□□ 0.64
DDR1-275ENST00000514434 ESCO1Q5FWF5 840 aa19.03■□□□□ 0.64
DDR1-275ENST00000514434 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
DDR1-275ENST00000514434 LRRC59Q96AG4 307 aaKnown RBP19.02■□□□□ 0.64
DDR1-275ENST00000514434 NHSL1Q5SYE7 1610 aa19.01■□□□□ 0.63
DDR1-275ENST00000514434 KNDC1Q76NI1 1749 aa19.01■□□□□ 0.63
DDR1-275ENST00000514434 PRAM1Q96QH2 718 aa19.01■□□□□ 0.63
DDR1-275ENST00000514434 LRP6O75581 1613 aa19■□□□□ 0.63
DDR1-275ENST00000514434 LAMC1P11047 1609 aa19■□□□□ 0.63
DDR1-275ENST00000514434 POTEAQ6S8J7 498 aa19■□□□□ 0.63
DDR1-275ENST00000514434 POGKQ9P215 609 aa19■□□□□ 0.63
DDR1-275ENST00000514434 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
DDR1-275ENST00000514434 CDC42BPGQ6DT37 1551 aa19■□□□□ 0.63
DDR1-275ENST00000514434 SHPRHQ149N8 1683 aa18.98■□□□□ 0.63
DDR1-275ENST00000514434 XPCQ01831 940 aaPredicted RBP18.98■□□□□ 0.63
DDR1-275ENST00000514434 SIRT1Q96EB6 747 aa18.98■□□□□ 0.63
DDR1-275ENST00000514434 FOXO3O43524 673 aa18.96■□□□□ 0.63
DDR1-275ENST00000514434 STAC3Q96MF2 364 aa18.95■□□□□ 0.62
DDR1-275ENST00000514434 SOS2Q07890 1332 aaPredicted RBP18.95■□□□□ 0.62
DDR1-275ENST00000514434 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
DDR1-275ENST00000514434 ADGRB1O14514 1584 aa18.94■□□□□ 0.62
DDR1-275ENST00000514434 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
DDR1-275ENST00000514434 NPHP3Q7Z494 1330 aa18.93■□□□□ 0.62
DDR1-275ENST00000514434 MINK1Q8N4C8 1332 aaPredicted RBP18.93■□□□□ 0.62
DDR1-275ENST00000514434 SIN3AQ96ST3 1273 aa18.92■□□□□ 0.62
DDR1-275ENST00000514434 FMN2Q9NZ56 1722 aa18.91■□□□□ 0.62
DDR1-275ENST00000514434 ADAMTS2O95450 1211 aa18.91■□□□□ 0.62
DDR1-275ENST00000514434 NEUROD1Q13562 356 aa18.91■□□□□ 0.62
DDR1-275ENST00000514434 DLC1Q96QB1 1528 aa18.9■□□□□ 0.62
DDR1-275ENST00000514434 C8orf37Q96NL8 207 aa18.9■□□□□ 0.62
DDR1-275ENST00000514434 ZNF772Q68DY9 489 aaPredicted RBP18.89■□□□□ 0.61
DDR1-275ENST00000514434 PHF8Q9UPP1 1060 aa18.88■□□□□ 0.61
DDR1-275ENST00000514434 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
DDR1-275ENST00000514434 AFF2P51816 1311 aa18.87■□□□□ 0.61
DDR1-275ENST00000514434 NBPF1Q3BBV0 1214 aa18.87■□□□□ 0.61
DDR1-275ENST00000514434 PXDNQ92626 1479 aa18.87■□□□□ 0.61
DDR1-275ENST00000514434 PLEKHG5O94827 1062 aa18.86■□□□□ 0.61
DDR1-275ENST00000514434 KRT28Q7Z3Y7 464 aa18.86■□□□□ 0.61
DDR1-275ENST00000514434 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
DDR1-275ENST00000514434 L3MBTL2Q969R5 705 aa18.86■□□□□ 0.61
DDR1-275ENST00000514434 NGLY1Q96IV0 654 aa18.85■□□□□ 0.61
DDR1-275ENST00000514434 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
DDR1-275ENST00000514434 WASLO00401 505 aaPredicted RBP18.82■□□□□ 0.6
DDR1-275ENST00000514434 PSME1Q06323 249 aa18.82■□□□□ 0.6
DDR1-275ENST00000514434 KIF1AQ12756 1690 aa18.82■□□□□ 0.6
DDR1-275ENST00000514434 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
DDR1-275ENST00000514434 ADGRB2O60241 1585 aa18.81■□□□□ 0.6
DDR1-275ENST00000514434 ARHGEF28Q8N1W1 1705 aaKnown RBP18.8■□□□□ 0.6
DDR1-275ENST00000514434 SPATA31A3Q5VYP0 1347 aa18.8■□□□□ 0.6
DDR1-275ENST00000514434 PRR36Q9H6K5 1346 aa18.8■□□□□ 0.6
DDR1-275ENST00000514434 RXRBP28702 533 aa18.8■□□□□ 0.6
DDR1-275ENST00000514434 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
DDR1-275ENST00000514434 USP32Q8NFA0 1604 aa18.79■□□□□ 0.6
DDR1-275ENST00000514434 QTRT2Q9H974 415 aaKnown RBP18.79■□□□□ 0.6
DDR1-275ENST00000514434 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
DDR1-275ENST00000514434 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
DDR1-275ENST00000514434 COL22A1Q8NFW1 1626 aaPredicted RBP18.78■□□□□ 0.6
DDR1-275ENST00000514434 CDK19Q9BWU1 502 aa18.77■□□□□ 0.6
DDR1-275ENST00000514434 USP21Q9UK80 565 aa18.77■□□□□ 0.6
DDR1-275ENST00000514434 TULP4Q9NRJ4 1543 aa18.76■□□□□ 0.59
DDR1-275ENST00000514434 HAP1P54257 671 aaPredicted RBP18.76■□□□□ 0.59
DDR1-275ENST00000514434 NGDNQ8NEJ9 315 aaKnown RBP18.76■□□□□ 0.59
DDR1-275ENST00000514434 CABLES1Q8TDN4 633 aa18.76■□□□□ 0.59
DDR1-275ENST00000514434 NUDT16Q96DE0 195 aaKnown RBP18.76■□□□□ 0.59
DDR1-275ENST00000514434 TNS3Q68CZ2 1445 aa18.74■□□□□ 0.59
DDR1-275ENST00000514434 GPRASP1Q5JY77 1395 aa18.73■□□□□ 0.59
DDR1-275ENST00000514434 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
DDR1-275ENST00000514434 SBNO1A3KN83 1393 aa18.72■□□□□ 0.59
DDR1-275ENST00000514434 PAK3O75914 559 aaPredicted RBP18.72■□□□□ 0.59
DDR1-275ENST00000514434 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
DDR1-275ENST00000514434 FNBP4Q8N3X1 1017 aaPredicted RBP18.72■□□□□ 0.59
DDR1-275ENST00000514434 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
DDR1-275ENST00000514434 SRPK2P78362 688 aaKnown RBP18.7■□□□□ 0.58
DDR1-275ENST00000514434 TRPC5Q9UL62 973 aaPredicted RBP18.7■□□□□ 0.58
DDR1-275ENST00000514434 ATP7BP35670 1465 aa18.7■□□□□ 0.58
DDR1-275ENST00000514434 ARHGEF10O15013 1369 aa18.69■□□□□ 0.58
DDR1-275ENST00000514434 NBPF8Q3BBV2 869 aa18.69■□□□□ 0.58
DDR1-275ENST00000514434 CABP2Q9NPB3 220 aa18.68■□□□□ 0.58
DDR1-275ENST00000514434 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
DDR1-275ENST00000514434 CCDC61Q9Y6R9 512 aa18.67■□□□□ 0.58
DDR1-275ENST00000514434 TRPM1Q7Z4N2 1603 aa18.67■□□□□ 0.58
DDR1-275ENST00000514434 MARF1Q9Y4F3 1742 aaKnown RBP18.66■□□□□ 0.58
DDR1-275ENST00000514434 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
DDR1-275ENST00000514434 ACEP12821 1306 aa18.65■□□□□ 0.58
DDR1-275ENST00000514434 ITSN1Q15811 1721 aa18.65■□□□□ 0.58
DDR1-275ENST00000514434 TRPM3Q9HCF6 1732 aaPredicted RBP18.65■□□□□ 0.58
DDR1-275ENST00000514434 RGS12O14924 1447 aa18.65■□□□□ 0.58
DDR1-275ENST00000514434 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
DDR1-275ENST00000514434 QRICH2Q9H0J4 1663 aa18.64■□□□□ 0.57
DDR1-275ENST00000514434 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
DDR1-275ENST00000514434 ATRNO75882 1429 aa18.64■□□□□ 0.57
DDR1-275ENST00000514434 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
DDR1-275ENST00000514434 PLEKHG3A1L390 1219 aa18.62■□□□□ 0.57
DDR1-275ENST00000514434 PPIP5K1Q6PFW1 1433 aa18.61■□□□□ 0.57
DDR1-275ENST00000514434 FAM83GA6ND36 823 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms