RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 TECPR2O15040 1411 aa13.53□□□□□ -0.24
SDHA-217ENST00000514233 COL22A1Q8NFW1 1626 aaPredicted RBP13.53□□□□□ -0.24
SDHA-217ENST00000514233 ADAMTS2O95450 1211 aa13.52□□□□□ -0.25
SDHA-217ENST00000514233 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
SDHA-217ENST00000514233 MYOM2P54296 1465 aa13.5□□□□□ -0.25
SDHA-217ENST00000514233 SPATA31E1Q6ZUB1 1445 aa13.5□□□□□ -0.25
SDHA-217ENST00000514233 USP21Q9UK80 565 aa13.5□□□□□ -0.25
SDHA-217ENST00000514233 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
SDHA-217ENST00000514233 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
SDHA-217ENST00000514233 PXDNQ92626 1479 aa13.49□□□□□ -0.25
SDHA-217ENST00000514233 CCDC144AA2RUR9 1427 aa13.49□□□□□ -0.25
SDHA-217ENST00000514233 ATRNO75882 1429 aa13.49□□□□□ -0.25
SDHA-217ENST00000514233 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
SDHA-217ENST00000514233 LRPPRCP42704 1394 aaKnown RBP13.48□□□□□ -0.25
SDHA-217ENST00000514233 ATAD2Q6PL18 1390 aa13.48□□□□□ -0.25
SDHA-217ENST00000514233 ABCC11Q96J66 1382 aa13.48□□□□□ -0.25
SDHA-217ENST00000514233 ADGRF5Q8IZF2 1346 aa13.48□□□□□ -0.25
SDHA-217ENST00000514233 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
SDHA-217ENST00000514233 BCL9LQ86UU0 1499 aa13.46□□□□□ -0.25
SDHA-217ENST00000514233 PIK3C2GO75747 1445 aa13.46□□□□□ -0.26
SDHA-217ENST00000514233 KNDC1Q76NI1 1749 aa13.45□□□□□ -0.26
SDHA-217ENST00000514233 FOXO3O43524 673 aa13.45□□□□□ -0.26
SDHA-217ENST00000514233 FOXD1Q16676 465 aa13.45□□□□□ -0.26
SDHA-217ENST00000514233 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
SDHA-217ENST00000514233 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
SDHA-217ENST00000514233 WAPLQ7Z5K2 1190 aa13.44□□□□□ -0.26
SDHA-217ENST00000514233 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
SDHA-217ENST00000514233 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
SDHA-217ENST00000514233 STK26Q9P289 416 aa13.43□□□□□ -0.26
SDHA-217ENST00000514233 MARF1Q9Y4F3 1742 aaKnown RBP13.43□□□□□ -0.26
SDHA-217ENST00000514233 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
SDHA-217ENST00000514233 CCDC125Q86Z20 511 aa13.42□□□□□ -0.26
SDHA-217ENST00000514233 PLEKHH1Q9ULM0 1364 aa13.42□□□□□ -0.26
SDHA-217ENST00000514233 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
SDHA-217ENST00000514233 KIF1AQ12756 1690 aa13.41□□□□□ -0.26
SDHA-217ENST00000514233 TMEM132EQ6IEE7 984 aa13.41□□□□□ -0.26
SDHA-217ENST00000514233 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
SDHA-217ENST00000514233 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
SDHA-217ENST00000514233 NRXN1Q9ULB1 1477 aa13.41□□□□□ -0.26
SDHA-217ENST00000514233 SLIT2O94813 1529 aa13.4□□□□□ -0.26
SDHA-217ENST00000514233 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.4□□□□□ -0.26
SDHA-217ENST00000514233 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
SDHA-217ENST00000514233 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
SDHA-217ENST00000514233 UNC5CLQ8IV45 518 aa13.39□□□□□ -0.27
SDHA-217ENST00000514233 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
SDHA-217ENST00000514233 KRT28Q7Z3Y7 464 aa13.37□□□□□ -0.27
SDHA-217ENST00000514233 RALGAPBQ86X10 1494 aa13.36□□□□□ -0.27
SDHA-217ENST00000514233 DHX57Q6P158 1386 aaKnown RBP13.36□□□□□ -0.27
SDHA-217ENST00000514233 USP32Q8NFA0 1604 aa13.36□□□□□ -0.27
SDHA-217ENST00000514233 TNS3Q68CZ2 1445 aa13.36□□□□□ -0.27
SDHA-217ENST00000514233 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
SDHA-217ENST00000514233 PSME1Q06323 249 aa13.35□□□□□ -0.27
SDHA-217ENST00000514233 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
SDHA-217ENST00000514233 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
SDHA-217ENST00000514233 GLI3P10071 1580 aa13.34□□□□□ -0.27
SDHA-217ENST00000514233 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
SDHA-217ENST00000514233 ARHGEF10O15013 1369 aa13.33□□□□□ -0.27
SDHA-217ENST00000514233 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
SDHA-217ENST00000514233 ONECUT3O60422 494 aaPredicted RBP13.33□□□□□ -0.28
SDHA-217ENST00000514233 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
SDHA-217ENST00000514233 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
SDHA-217ENST00000514233 BLMP54132 1417 aaPredicted RBP13.32□□□□□ -0.28
SDHA-217ENST00000514233 VPS72Q15906 364 aa13.32□□□□□ -0.28
SDHA-217ENST00000514233 NWD2Q9ULI1 1742 aa13.32□□□□□ -0.28
SDHA-217ENST00000514233 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
SDHA-217ENST00000514233 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
SDHA-217ENST00000514233 RAB3GAP2Q9H2M9 1393 aa13.31□□□□□ -0.28
SDHA-217ENST00000514233 ADGRB1O14514 1584 aa13.3□□□□□ -0.28
SDHA-217ENST00000514233 HAP1P54257 671 aaPredicted RBP13.29□□□□□ -0.28
SDHA-217ENST00000514233 SEPT12Q8IYM1 358 aa13.29□□□□□ -0.28
SDHA-217ENST00000514233 ABCA3Q99758 1704 aa13.29□□□□□ -0.28
SDHA-217ENST00000514233 PLCH1Q4KWH8 1693 aa13.28□□□□□ -0.28
SDHA-217ENST00000514233 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
SDHA-217ENST00000514233 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
SDHA-217ENST00000514233 POGKQ9P215 609 aa13.28□□□□□ -0.28
SDHA-217ENST00000514233 EIF3AQ14152 1382 aaKnown RBP13.28□□□□□ -0.28
SDHA-217ENST00000514233 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
SDHA-217ENST00000514233 SAFB2Q14151 953 aaKnown RBP eCLIP13.27□□□□□ -0.29
SDHA-217ENST00000514233 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
SDHA-217ENST00000514233 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
SDHA-217ENST00000514233 LMOD2Q6P5Q4 547 aa13.25□□□□□ -0.29
SDHA-217ENST00000514233 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
SDHA-217ENST00000514233 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
SDHA-217ENST00000514233 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
SDHA-217ENST00000514233 GPRASP1Q5JY77 1395 aa13.24□□□□□ -0.29
SDHA-217ENST00000514233 SF3B2Q13435 895 aaKnown RBP13.24□□□□□ -0.29
SDHA-217ENST00000514233 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
SDHA-217ENST00000514233 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
SDHA-217ENST00000514233 NRAPQ86VF7 1730 aa13.23□□□□□ -0.29
SDHA-217ENST00000514233 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
SDHA-217ENST00000514233 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
SDHA-217ENST00000514233 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
SDHA-217ENST00000514233 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
SDHA-217ENST00000514233 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
SDHA-217ENST00000514233 BTG4Q9NY30 223 aa13.22□□□□□ -0.29
SDHA-217ENST00000514233 COL14A1Q05707 1796 aaKnown RBP13.22□□□□□ -0.29
SDHA-217ENST00000514233 HRCP23327 699 aa13.21□□□□□ -0.29
SDHA-217ENST00000514233 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
SDHA-217ENST00000514233 MINK1Q8N4C8 1332 aaPredicted RBP13.2□□□□□ -0.3
SDHA-217ENST00000514233 ARHGEF28Q8N1W1 1705 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms