RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 RGS17Q9UGC6 210 aaPredicted RBP12.8□□□□□ -0.36
HERC4-214ENST00000513996 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
HERC4-214ENST00000513996 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
HERC4-214ENST00000513996 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
HERC4-214ENST00000513996 DCAF11Q8TEB1 546 aa12.79□□□□□ -0.36
HERC4-214ENST00000513996 ORAI2Q96SN7 254 aa12.79□□□□□ -0.36
HERC4-214ENST00000513996 NALCNQ8IZF0 1738 aa12.78□□□□□ -0.36
HERC4-214ENST00000513996 TECPR2O15040 1411 aa12.78□□□□□ -0.36
HERC4-214ENST00000513996 YTHDC2Q9H6S0 1430 aaKnown RBP12.78□□□□□ -0.36
HERC4-214ENST00000513996 MYOM2P54296 1465 aa12.78□□□□□ -0.36
HERC4-214ENST00000513996 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
HERC4-214ENST00000513996 PHLPP1O60346 1717 aa12.77□□□□□ -0.36
HERC4-214ENST00000513996 JCADQ9P266 1359 aa12.77□□□□□ -0.37
HERC4-214ENST00000513996 COL16A1Q07092 1604 aaPredicted RBP12.77□□□□□ -0.37
HERC4-214ENST00000513996 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
HERC4-214ENST00000513996 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
HERC4-214ENST00000513996 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
HERC4-214ENST00000513996 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
HERC4-214ENST00000513996 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
HERC4-214ENST00000513996 SOCS7O14512 581 aa12.73□□□□□ -0.37
HERC4-214ENST00000513996 SAFB2Q14151 953 aaKnown RBP eCLIP12.73□□□□□ -0.37
HERC4-214ENST00000513996 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
HERC4-214ENST00000513996 PRAM1Q96QH2 718 aa12.73□□□□□ -0.37
HERC4-214ENST00000513996 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
HERC4-214ENST00000513996 POTEAQ6S8J7 498 aa12.72□□□□□ -0.37
HERC4-214ENST00000513996 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
HERC4-214ENST00000513996 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
HERC4-214ENST00000513996 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
HERC4-214ENST00000513996 LRRC59Q96AG4 307 aaKnown RBP12.71□□□□□ -0.37
HERC4-214ENST00000513996 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
HERC4-214ENST00000513996 LRP6O75581 1613 aa12.7□□□□□ -0.38
HERC4-214ENST00000513996 SOS2Q07890 1332 aaPredicted RBP12.7□□□□□ -0.38
HERC4-214ENST00000513996 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
HERC4-214ENST00000513996 NUTM2BA6NNL0 878 aaPredicted RBP12.7□□□□□ -0.38
HERC4-214ENST00000513996 NUTM2EB1AL46 878 aaPredicted RBP12.7□□□□□ -0.38
HERC4-214ENST00000513996 NUTM2AQ8IVF1 878 aaPredicted RBP12.7□□□□□ -0.38
HERC4-214ENST00000513996 KNDC1Q76NI1 1749 aa12.7□□□□□ -0.38
HERC4-214ENST00000513996 FOXO3O43524 673 aa12.69□□□□□ -0.38
HERC4-214ENST00000513996 POGKQ9P215 609 aa12.69□□□□□ -0.38
HERC4-214ENST00000513996 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
HERC4-214ENST00000513996 XPCQ01831 940 aaPredicted RBP12.68□□□□□ -0.38
HERC4-214ENST00000513996 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
HERC4-214ENST00000513996 L3MBTL2Q969R5 705 aa12.68□□□□□ -0.38
HERC4-214ENST00000513996 CDC42BPGQ6DT37 1551 aa12.68□□□□□ -0.38
HERC4-214ENST00000513996 PNPLA6Q8IY17 1366 aa12.68□□□□□ -0.38
HERC4-214ENST00000513996 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
HERC4-214ENST00000513996 HIRIP3Q9BW71 556 aaPredicted RBP12.67□□□□□ -0.38
HERC4-214ENST00000513996 LAMC1P11047 1609 aa12.66□□□□□ -0.38
HERC4-214ENST00000513996 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
HERC4-214ENST00000513996 DLC1Q96QB1 1528 aa12.66□□□□□ -0.38
HERC4-214ENST00000513996 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
HERC4-214ENST00000513996 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
HERC4-214ENST00000513996 MEX3CQ5U5Q3 659 aaKnown RBP12.65□□□□□ -0.38
HERC4-214ENST00000513996 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
HERC4-214ENST00000513996 PHF8Q9UPP1 1060 aa12.64□□□□□ -0.39
HERC4-214ENST00000513996 FMN2Q9NZ56 1722 aa12.63□□□□□ -0.39
HERC4-214ENST00000513996 PXDNQ92626 1479 aa12.63□□□□□ -0.39
HERC4-214ENST00000513996 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
HERC4-214ENST00000513996 WASLO00401 505 aaPredicted RBP12.62□□□□□ -0.39
HERC4-214ENST00000513996 KRT28Q7Z3Y7 464 aa12.62□□□□□ -0.39
HERC4-214ENST00000513996 ADAMTS2O95450 1211 aa12.61□□□□□ -0.39
HERC4-214ENST00000513996 PMFBP1Q8TBY8 1022 aa12.61□□□□□ -0.39
HERC4-214ENST00000513996 AFF2P51816 1311 aa12.61□□□□□ -0.39
HERC4-214ENST00000513996 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
HERC4-214ENST00000513996 RGPD8O14715 1765 aaPredicted RBP12.6□□□□□ -0.39
HERC4-214ENST00000513996 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
HERC4-214ENST00000513996 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
HERC4-214ENST00000513996 ZNF772Q68DY9 489 aaPredicted RBP12.59□□□□□ -0.39
HERC4-214ENST00000513996 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
HERC4-214ENST00000513996 CDK19Q9BWU1 502 aa12.58□□□□□ -0.4
HERC4-214ENST00000513996 USP32Q8NFA0 1604 aa12.58□□□□□ -0.4
HERC4-214ENST00000513996 ADGRB2O60241 1585 aa12.57□□□□□ -0.4
HERC4-214ENST00000513996 PSME1Q06323 249 aa12.57□□□□□ -0.4
HERC4-214ENST00000513996 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
HERC4-214ENST00000513996 NGLY1Q96IV0 654 aa12.57□□□□□ -0.4
HERC4-214ENST00000513996 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
HERC4-214ENST00000513996 ARHGEF28Q8N1W1 1705 aaKnown RBP12.56□□□□□ -0.4
HERC4-214ENST00000513996 KIAA1210Q9ULL0 1709 aa12.56□□□□□ -0.4
HERC4-214ENST00000513996 FNBP4Q8N3X1 1017 aaPredicted RBP12.55□□□□□ -0.4
HERC4-214ENST00000513996 CABLES1Q8TDN4 633 aa12.55□□□□□ -0.4
HERC4-214ENST00000513996 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
HERC4-214ENST00000513996 RXRBP28702 533 aa12.54□□□□□ -0.4
HERC4-214ENST00000513996 COL22A1Q8NFW1 1626 aaPredicted RBP12.54□□□□□ -0.4
HERC4-214ENST00000513996 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
HERC4-214ENST00000513996 SBNO1A3KN83 1393 aa12.54□□□□□ -0.4
HERC4-214ENST00000513996 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
HERC4-214ENST00000513996 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
HERC4-214ENST00000513996 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
HERC4-214ENST00000513996 CENPJQ9HC77 1338 aaPredicted RBP12.53□□□□□ -0.4
HERC4-214ENST00000513996 TNS3Q68CZ2 1445 aa12.53□□□□□ -0.4
HERC4-214ENST00000513996 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
HERC4-214ENST00000513996 USP21Q9UK80 565 aa12.52□□□□□ -0.41
HERC4-214ENST00000513996 EIF3AQ14152 1382 aaKnown RBP12.52□□□□□ -0.41
HERC4-214ENST00000513996 ATP7BP35670 1465 aa12.52□□□□□ -0.41
HERC4-214ENST00000513996 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
HERC4-214ENST00000513996 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
HERC4-214ENST00000513996 PLEKHG3A1L390 1219 aa12.5□□□□□ -0.41
HERC4-214ENST00000513996 RBM6P78332 1123 aaKnown RBP12.5□□□□□ -0.41
HERC4-214ENST00000513996 ACEP12821 1306 aa12.5□□□□□ -0.41
HERC4-214ENST00000513996 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms