RNA–Protein interactions for RNA: ENST00000513821.5

SGCA-209, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,090 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-209ENST00000513821 TRAK1Q9UPV9 953 aa19.97■□□□□ 0.79
SGCA-209ENST00000513821 AHDC1Q5TGY3 1603 aaPredicted RBP19.97■□□□□ 0.79
SGCA-209ENST00000513821 SPATA31A6Q5VVP1 1343 aa19.97■□□□□ 0.79
SGCA-209ENST00000513821 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
SGCA-209ENST00000513821 ILDR2Q71H61 639 aa19.96■□□□□ 0.79
SGCA-209ENST00000513821 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.79
SGCA-209ENST00000513821 NEUROD1Q13562 356 aa19.95■□□□□ 0.78
SGCA-209ENST00000513821 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.78
SGCA-209ENST00000513821 KNDC1Q76NI1 1749 aa19.94■□□□□ 0.78
SGCA-209ENST00000513821 SAFB2Q14151 953 aaKnown RBP eCLIP19.93■□□□□ 0.78
SGCA-209ENST00000513821 L3MBTL2Q969R5 705 aa19.93■□□□□ 0.78
SGCA-209ENST00000513821 NUTM2FA1L443 756 aa19.92■□□□□ 0.78
SGCA-209ENST00000513821 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
SGCA-209ENST00000513821 DLC1Q96QB1 1528 aa19.92■□□□□ 0.78
SGCA-209ENST00000513821 COL16A1Q07092 1604 aaPredicted RBP19.91■□□□□ 0.78
SGCA-209ENST00000513821 NPHP3Q7Z494 1330 aa19.91■□□□□ 0.78
SGCA-209ENST00000513821 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
SGCA-209ENST00000513821 SOS2Q07890 1332 aaPredicted RBP19.9■□□□□ 0.78
SGCA-209ENST00000513821 ADGRB1O14514 1584 aa19.9■□□□□ 0.78
SGCA-209ENST00000513821 MEX3CQ5U5Q3 659 aaKnown RBP19.89■□□□□ 0.77
SGCA-209ENST00000513821 FOXO3O43524 673 aa19.88■□□□□ 0.77
SGCA-209ENST00000513821 NUTM2BA6NNL0 878 aaPredicted RBP19.86■□□□□ 0.77
SGCA-209ENST00000513821 NUTM2EB1AL46 878 aaPredicted RBP19.86■□□□□ 0.77
SGCA-209ENST00000513821 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
SGCA-209ENST00000513821 NUTM2AQ8IVF1 878 aaPredicted RBP19.86■□□□□ 0.77
SGCA-209ENST00000513821 MINK1Q8N4C8 1332 aaPredicted RBP19.85■□□□□ 0.77
SGCA-209ENST00000513821 NHSL1Q5SYE7 1610 aa19.85■□□□□ 0.77
SGCA-209ENST00000513821 RGS17Q9UGC6 210 aaPredicted RBP19.85■□□□□ 0.77
SGCA-209ENST00000513821 PHF8Q9UPP1 1060 aa19.85■□□□□ 0.77
SGCA-209ENST00000513821 WASLO00401 505 aaPredicted RBP19.84■□□□□ 0.77
SGCA-209ENST00000513821 SOCS7O14512 581 aa19.84■□□□□ 0.77
SGCA-209ENST00000513821 PSME1Q06323 249 aa19.84■□□□□ 0.77
SGCA-209ENST00000513821 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.77
SGCA-209ENST00000513821 HIRIP3Q9BW71 556 aaPredicted RBP19.83■□□□□ 0.77
SGCA-209ENST00000513821 SHPRHQ149N8 1683 aa19.82■□□□□ 0.76
SGCA-209ENST00000513821 KRT28Q7Z3Y7 464 aa19.82■□□□□ 0.76
SGCA-209ENST00000513821 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
SGCA-209ENST00000513821 PNPLA6Q8IY17 1366 aa19.82■□□□□ 0.76
SGCA-209ENST00000513821 ZNF772Q68DY9 489 aaPredicted RBP19.81■□□□□ 0.76
SGCA-209ENST00000513821 ANKARQ7Z5J8 1434 aa19.8■□□□□ 0.76
SGCA-209ENST00000513821 FMN2Q9NZ56 1722 aa19.79■□□□□ 0.76
SGCA-209ENST00000513821 XPCQ01831 940 aaPredicted RBP19.78■□□□□ 0.76
SGCA-209ENST00000513821 POTEAQ6S8J7 498 aa19.77■□□□□ 0.76
SGCA-209ENST00000513821 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
SGCA-209ENST00000513821 PMFBP1Q8TBY8 1022 aa19.76■□□□□ 0.75
SGCA-209ENST00000513821 CDK19Q9BWU1 502 aa19.76■□□□□ 0.75
SGCA-209ENST00000513821 SPATA31A3Q5VYP0 1347 aa19.76■□□□□ 0.75
SGCA-209ENST00000513821 NUDT16Q96DE0 195 aaKnown RBP19.75■□□□□ 0.75
SGCA-209ENST00000513821 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
SGCA-209ENST00000513821 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
SGCA-209ENST00000513821 LRP6O75581 1613 aa19.74■□□□□ 0.75
SGCA-209ENST00000513821 NGDNQ8NEJ9 315 aaKnown RBP19.74■□□□□ 0.75
SGCA-209ENST00000513821 NGLY1Q96IV0 654 aa19.74■□□□□ 0.75
SGCA-209ENST00000513821 KIF1AQ12756 1690 aa19.74■□□□□ 0.75
SGCA-209ENST00000513821 PXDNQ92626 1479 aa19.73■□□□□ 0.75
SGCA-209ENST00000513821 ADAMTS2O95450 1211 aa19.73■□□□□ 0.75
SGCA-209ENST00000513821 ROCK2O75116 1388 aaKnown RBP19.72■□□□□ 0.75
SGCA-209ENST00000513821 GPRASP1Q5JY77 1395 aa19.72■□□□□ 0.75
SGCA-209ENST00000513821 C8orf37Q96NL8 207 aa19.72■□□□□ 0.75
SGCA-209ENST00000513821 PCGF6Q9BYE7 350 aa19.72■□□□□ 0.75
SGCA-209ENST00000513821 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
SGCA-209ENST00000513821 PRR36Q9H6K5 1346 aa19.72■□□□□ 0.75
SGCA-209ENST00000513821 SBNO1A3KN83 1393 aa19.71■□□□□ 0.75
SGCA-209ENST00000513821 NBPF8Q3BBV2 869 aa19.71■□□□□ 0.75
SGCA-209ENST00000513821 AFF2P51816 1311 aa19.71■□□□□ 0.75
SGCA-209ENST00000513821 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
SGCA-209ENST00000513821 RGPD8O14715 1765 aaPredicted RBP19.7■□□□□ 0.74
SGCA-209ENST00000513821 TULP4Q9NRJ4 1543 aa19.7■□□□□ 0.74
SGCA-209ENST00000513821 LMOD2Q6P5Q4 547 aa19.69■□□□□ 0.74
SGCA-209ENST00000513821 RXRBP28702 533 aa19.68■□□□□ 0.74
SGCA-209ENST00000513821 SRPK2P78362 688 aaKnown RBP19.68■□□□□ 0.74
SGCA-209ENST00000513821 PLEKHG3A1L390 1219 aa19.67■□□□□ 0.74
SGCA-209ENST00000513821 HAP1P54257 671 aaPredicted RBP19.67■□□□□ 0.74
SGCA-209ENST00000513821 CARD11Q9BXL7 1154 aa19.67■□□□□ 0.74
SGCA-209ENST00000513821 QTRT2Q9H974 415 aaKnown RBP19.67■□□□□ 0.74
SGCA-209ENST00000513821 ARHGEF10O15013 1369 aa19.67■□□□□ 0.74
SGCA-209ENST00000513821 FNBP4Q8N3X1 1017 aaPredicted RBP19.66■□□□□ 0.74
SGCA-209ENST00000513821 EVC2Q86UK5 1308 aa19.66■□□□□ 0.74
SGCA-209ENST00000513821 CLSPNQ9HAW4 1339 aa19.66■□□□□ 0.74
SGCA-209ENST00000513821 TIMELESSQ9UNS1 1208 aa19.65■□□□□ 0.74
SGCA-209ENST00000513821 TNS3Q68CZ2 1445 aa19.65■□□□□ 0.74
SGCA-209ENST00000513821 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
SGCA-209ENST00000513821 PAK3O75914 559 aaPredicted RBP19.64■□□□□ 0.73
SGCA-209ENST00000513821 USP21Q9UK80 565 aa19.64■□□□□ 0.73
SGCA-209ENST00000513821 TRPM1Q7Z4N2 1603 aa19.64■□□□□ 0.73
SGCA-209ENST00000513821 COL22A1Q8NFW1 1626 aaPredicted RBP19.64■□□□□ 0.73
SGCA-209ENST00000513821 CABP2Q9NPB3 220 aa19.63■□□□□ 0.73
SGCA-209ENST00000513821 ACEP12821 1306 aa19.62■□□□□ 0.73
SGCA-209ENST00000513821 RBM6P78332 1123 aaKnown RBP19.62■□□□□ 0.73
SGCA-209ENST00000513821 TRPC5Q9UL62 973 aaPredicted RBP19.61■□□□□ 0.73
SGCA-209ENST00000513821 ATP7BP35670 1465 aa19.6■□□□□ 0.73
SGCA-209ENST00000513821 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
SGCA-209ENST00000513821 CABLES1Q8TDN4 633 aa19.6■□□□□ 0.73
SGCA-209ENST00000513821 POLR3AO14802 1390 aaPredicted RBP19.58■□□□□ 0.73
SGCA-209ENST00000513821 CABP1Q9NZU7 370 aa19.58■□□□□ 0.72
SGCA-209ENST00000513821 ITSN1Q15811 1721 aa19.57■□□□□ 0.72
SGCA-209ENST00000513821 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
SGCA-209ENST00000513821 ZNF692Q9BU19 519 aaPredicted RBP19.57■□□□□ 0.72
SGCA-209ENST00000513821 BRD4O60885 1362 aaPredicted RBP19.56■□□□□ 0.72
SGCA-209ENST00000513821 RALGAPBQ86X10 1494 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms