RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 PRAM1Q96QH2 718 aa25.69■■□□□ 1.7
DDR1-272ENST00000513243 COL16A1Q07092 1604 aaPredicted RBP25.68■■□□□ 1.7
DDR1-272ENST00000513243 L3MBTL2Q969R5 705 aa25.68■■□□□ 1.7
DDR1-272ENST00000513243 TRAK1Q9UPV9 953 aa25.68■■□□□ 1.7
DDR1-272ENST00000513243 CDC42BPGQ6DT37 1551 aa25.68■■□□□ 1.7
DDR1-272ENST00000513243 DLC1Q96QB1 1528 aa25.67■■□□□ 1.7
DDR1-272ENST00000513243 ORAI2Q96SN7 254 aa25.66■■□□□ 1.7
DDR1-272ENST00000513243 SAFB2Q14151 953 aaKnown RBP eCLIP25.65■■□□□ 1.7
DDR1-272ENST00000513243 DDX17Q92841 729 aaKnown RBP25.64■■□□□ 1.7
DDR1-272ENST00000513243 POGKQ9P215 609 aa25.64■■□□□ 1.7
DDR1-272ENST00000513243 JCADQ9P266 1359 aa25.64■■□□□ 1.69
DDR1-272ENST00000513243 NUTM2FA1L443 756 aa25.61■■□□□ 1.69
DDR1-272ENST00000513243 NHSL1Q5SYE7 1610 aa25.61■■□□□ 1.69
DDR1-272ENST00000513243 NBPF1Q3BBV0 1214 aa25.6■■□□□ 1.69
DDR1-272ENST00000513243 ESCO1Q5FWF5 840 aa25.59■■□□□ 1.69
DDR1-272ENST00000513243 KIAA1210Q9ULL0 1709 aa25.58■■□□□ 1.69
DDR1-272ENST00000513243 ILDR2Q71H61 639 aa25.56■■□□□ 1.68
DDR1-272ENST00000513243 FMN2Q9NZ56 1722 aa25.56■■□□□ 1.68
DDR1-272ENST00000513243 LRRC59Q96AG4 307 aaKnown RBP25.55■■□□□ 1.68
DDR1-272ENST00000513243 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
DDR1-272ENST00000513243 HIRIP3Q9BW71 556 aaPredicted RBP25.54■■□□□ 1.68
DDR1-272ENST00000513243 MINK1Q8N4C8 1332 aaPredicted RBP25.54■■□□□ 1.68
DDR1-272ENST00000513243 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
DDR1-272ENST00000513243 SOS2Q07890 1332 aaPredicted RBP25.53■■□□□ 1.68
DDR1-272ENST00000513243 SPATA31A6Q5VVP1 1343 aa25.52■■□□□ 1.68
DDR1-272ENST00000513243 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.68
DDR1-272ENST00000513243 FOXO3O43524 673 aa25.51■■□□□ 1.67
DDR1-272ENST00000513243 ADGRB2O60241 1585 aa25.51■■□□□ 1.67
DDR1-272ENST00000513243 SHPRHQ149N8 1683 aa25.51■■□□□ 1.67
DDR1-272ENST00000513243 NPHP3Q7Z494 1330 aa25.49■■□□□ 1.67
DDR1-272ENST00000513243 WASLO00401 505 aaPredicted RBP25.47■■□□□ 1.67
DDR1-272ENST00000513243 NBPF8Q3BBV2 869 aa25.47■■□□□ 1.67
DDR1-272ENST00000513243 RGS17Q9UGC6 210 aaPredicted RBP25.47■■□□□ 1.67
DDR1-272ENST00000513243 LRP6O75581 1613 aa25.47■■□□□ 1.67
DDR1-272ENST00000513243 PNPLA6Q8IY17 1366 aa25.46■■□□□ 1.67
DDR1-272ENST00000513243 TONSLQ96HA7 1378 aa25.46■■□□□ 1.67
DDR1-272ENST00000513243 XPCQ01831 940 aaPredicted RBP25.46■■□□□ 1.67
DDR1-272ENST00000513243 PHF8Q9UPP1 1060 aa25.45■■□□□ 1.66
DDR1-272ENST00000513243 RGPD8O14715 1765 aaPredicted RBP25.45■■□□□ 1.66
DDR1-272ENST00000513243 PXDNQ92626 1479 aa25.45■■□□□ 1.66
DDR1-272ENST00000513243 ANKARQ7Z5J8 1434 aa25.45■■□□□ 1.66
DDR1-272ENST00000513243 TRPM1Q7Z4N2 1603 aa25.45■■□□□ 1.66
DDR1-272ENST00000513243 NUTM2BA6NNL0 878 aaPredicted RBP25.44■■□□□ 1.66
DDR1-272ENST00000513243 NUTM2EB1AL46 878 aaPredicted RBP25.44■■□□□ 1.66
DDR1-272ENST00000513243 NUTM2AQ8IVF1 878 aaPredicted RBP25.44■■□□□ 1.66
DDR1-272ENST00000513243 USP32Q8NFA0 1604 aa25.44■■□□□ 1.66
DDR1-272ENST00000513243 PRR36Q9H6K5 1346 aa25.42■■□□□ 1.66
DDR1-272ENST00000513243 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
DDR1-272ENST00000513243 ROCK2O75116 1388 aaKnown RBP25.41■■□□□ 1.66
DDR1-272ENST00000513243 EIF3AQ14152 1382 aaKnown RBP25.41■■□□□ 1.66
DDR1-272ENST00000513243 TULP4Q9NRJ4 1543 aa25.4■■□□□ 1.66
DDR1-272ENST00000513243 CENPJQ9HC77 1338 aaPredicted RBP25.39■■□□□ 1.66
DDR1-272ENST00000513243 MEX3CQ5U5Q3 659 aaKnown RBP25.39■■□□□ 1.66
DDR1-272ENST00000513243 KRT28Q7Z3Y7 464 aa25.39■■□□□ 1.66
DDR1-272ENST00000513243 PMFBP1Q8TBY8 1022 aa25.39■■□□□ 1.66
DDR1-272ENST00000513243 CDK19Q9BWU1 502 aa25.38■■□□□ 1.65
DDR1-272ENST00000513243 GPRASP1Q5JY77 1395 aa25.35■■□□□ 1.65
DDR1-272ENST00000513243 NUDT16Q96DE0 195 aaKnown RBP25.35■■□□□ 1.65
DDR1-272ENST00000513243 SPATA31A3Q5VYP0 1347 aa25.35■■□□□ 1.65
DDR1-272ENST00000513243 PSME1Q06323 249 aa25.34■■□□□ 1.65
DDR1-272ENST00000513243 POTEAQ6S8J7 498 aa25.34■■□□□ 1.65
DDR1-272ENST00000513243 ATP7BP35670 1465 aa25.33■■□□□ 1.65
DDR1-272ENST00000513243 COL22A1Q8NFW1 1626 aaPredicted RBP25.31■■□□□ 1.64
DDR1-272ENST00000513243 ADAMTS2O95450 1211 aa25.3■■□□□ 1.64
DDR1-272ENST00000513243 QRICH2Q9H0J4 1663 aa25.29■■□□□ 1.64
DDR1-272ENST00000513243 RALGAPBQ86X10 1494 aa25.29■■□□□ 1.64
DDR1-272ENST00000513243 CARD11Q9BXL7 1154 aa25.29■■□□□ 1.64
DDR1-272ENST00000513243 CLSPNQ9HAW4 1339 aa25.29■■□□□ 1.64
DDR1-272ENST00000513243 SBNO1A3KN83 1393 aa25.29■■□□□ 1.64
DDR1-272ENST00000513243 NGDNQ8NEJ9 315 aaKnown RBP25.28■■□□□ 1.64
DDR1-272ENST00000513243 CCDC61Q9Y6R9 512 aa25.28■■□□□ 1.64
DDR1-272ENST00000513243 SRPK2P78362 688 aaKnown RBP25.27■■□□□ 1.64
DDR1-272ENST00000513243 C8orf37Q96NL8 207 aa25.27■■□□□ 1.64
DDR1-272ENST00000513243 TNS3Q68CZ2 1445 aa25.27■■□□□ 1.64
DDR1-272ENST00000513243 ZNF772Q68DY9 489 aaPredicted RBP25.26■■□□□ 1.63
DDR1-272ENST00000513243 CABP2Q9NPB3 220 aa25.26■■□□□ 1.63
DDR1-272ENST00000513243 SOCS7O14512 581 aa25.25■■□□□ 1.63
DDR1-272ENST00000513243 AFF2P51816 1311 aa25.25■■□□□ 1.63
DDR1-272ENST00000513243 ITSN1Q15811 1721 aa25.24■■□□□ 1.63
DDR1-272ENST00000513243 PLEKHG3A1L390 1219 aa25.23■■□□□ 1.63
DDR1-272ENST00000513243 LMOD2Q6P5Q4 547 aa25.23■■□□□ 1.63
DDR1-272ENST00000513243 NGLY1Q96IV0 654 aa25.22■■□□□ 1.63
DDR1-272ENST00000513243 TOPAZ1Q8N9V7 1692 aa25.22■■□□□ 1.63
DDR1-272ENST00000513243 TRPM3Q9HCF6 1732 aaPredicted RBP25.21■■□□□ 1.63
DDR1-272ENST00000513243 EVC2Q86UK5 1308 aa25.21■■□□□ 1.63
DDR1-272ENST00000513243 ARHGEF10O15013 1369 aa25.2■■□□□ 1.63
DDR1-272ENST00000513243 ACEP12821 1306 aa25.2■■□□□ 1.62
DDR1-272ENST00000513243 CCER1Q8TC90 406 aaPredicted RBP25.2■■□□□ 1.62
DDR1-272ENST00000513243 TIMELESSQ9UNS1 1208 aa25.2■■□□□ 1.62
DDR1-272ENST00000513243 POLR3AO14802 1390 aaPredicted RBP25.19■■□□□ 1.62
DDR1-272ENST00000513243 CABLES1Q8TDN4 633 aa25.19■■□□□ 1.62
DDR1-272ENST00000513243 PLEKHG5O94827 1062 aa25.18■■□□□ 1.62
DDR1-272ENST00000513243 PPIP5K1Q6PFW1 1433 aa25.18■■□□□ 1.62
DDR1-272ENST00000513243 PAK3O75914 559 aaPredicted RBP25.17■■□□□ 1.62
DDR1-272ENST00000513243 FNBP4Q8N3X1 1017 aaPredicted RBP25.16■■□□□ 1.62
DDR1-272ENST00000513243 SBNO2Q9Y2G9 1366 aa25.16■■□□□ 1.62
DDR1-272ENST00000513243 CABP1Q9NZU7 370 aa25.15■■□□□ 1.62
DDR1-272ENST00000513243 ALS2Q96Q42 1657 aa25.15■■□□□ 1.62
DDR1-272ENST00000513243 HAP1P54257 671 aaPredicted RBP25.13■■□□□ 1.61
DDR1-272ENST00000513243 QTRT2Q9H974 415 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms