RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ATRNO75882 1429 aa21.3■■□□□ 1
SPCS3-204ENST00000513139 ZRANB1Q9UGI0 708 aa21.3■■□□□ 1
SPCS3-204ENST00000513139 CCDC125Q86Z20 511 aa21.29■■□□□ 1
SPCS3-204ENST00000513139 ORAI2Q96SN7 254 aa21.29■■□□□ 1
SPCS3-204ENST00000513139 ROBO2Q9HCK4 1378 aa21.27■■□□□ 1
SPCS3-204ENST00000513139 VGFO15240 615 aaPredicted RBP21.26■□□□□ 0.99
SPCS3-204ENST00000513139 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
SPCS3-204ENST00000513139 MYOM2P54296 1465 aa21.25■□□□□ 0.99
SPCS3-204ENST00000513139 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
SPCS3-204ENST00000513139 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
SPCS3-204ENST00000513139 ITGAEP38570 1179 aa21.23■□□□□ 0.99
SPCS3-204ENST00000513139 BCL9LQ86UU0 1499 aa21.22■□□□□ 0.99
SPCS3-204ENST00000513139 NPHP3Q7Z494 1330 aa21.22■□□□□ 0.99
SPCS3-204ENST00000513139 PPLO60437 1756 aa21.21■□□□□ 0.99
SPCS3-204ENST00000513139 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
SPCS3-204ENST00000513139 PXDNQ92626 1479 aa21.2■□□□□ 0.98
SPCS3-204ENST00000513139 RPGRIP1LQ68CZ1 1315 aa21.2■□□□□ 0.98
SPCS3-204ENST00000513139 GJD4Q96KN9 370 aaPredicted RBP21.18■□□□□ 0.98
SPCS3-204ENST00000513139 ESCO1Q5FWF5 840 aa21.16■□□□□ 0.98
SPCS3-204ENST00000513139 LRPPRCP42704 1394 aaKnown RBP21.15■□□□□ 0.98
SPCS3-204ENST00000513139 BRWD3Q6RI45 1802 aa21.15■□□□□ 0.98
SPCS3-204ENST00000513139 BLMP54132 1417 aaPredicted RBP21.12■□□□□ 0.97
SPCS3-204ENST00000513139 FOXO3O43524 673 aa21.12■□□□□ 0.97
SPCS3-204ENST00000513139 GLI3P10071 1580 aa21.11■□□□□ 0.97
SPCS3-204ENST00000513139 SLIT2O94813 1529 aa21.11■□□□□ 0.97
SPCS3-204ENST00000513139 UNC5CLQ8IV45 518 aa21.1■□□□□ 0.97
SPCS3-204ENST00000513139 NAIPQ13075 1403 aa21.1■□□□□ 0.97
SPCS3-204ENST00000513139 RALGAPBQ86X10 1494 aa21.09■□□□□ 0.97
SPCS3-204ENST00000513139 KIF1AQ12756 1690 aa21.09■□□□□ 0.97
SPCS3-204ENST00000513139 TECPR2O15040 1411 aa21.08■□□□□ 0.97
SPCS3-204ENST00000513139 KNDC1Q76NI1 1749 aa21.07■□□□□ 0.96
SPCS3-204ENST00000513139 FMN2Q9NZ56 1722 aa21.07■□□□□ 0.96
SPCS3-204ENST00000513139 XPCQ01831 940 aaPredicted RBP21.07■□□□□ 0.96
SPCS3-204ENST00000513139 USP32Q8NFA0 1604 aa21.07■□□□□ 0.96
SPCS3-204ENST00000513139 LRP5O75197 1615 aa21.06■□□□□ 0.96
SPCS3-204ENST00000513139 SPATA31A3Q5VYP0 1347 aa21.05■□□□□ 0.96
SPCS3-204ENST00000513139 NWD2Q9ULI1 1742 aa21.05■□□□□ 0.96
SPCS3-204ENST00000513139 CCDC144AA2RUR9 1427 aa21.04■□□□□ 0.96
SPCS3-204ENST00000513139 IFT172Q9UG01 1749 aa21.03■□□□□ 0.96
SPCS3-204ENST00000513139 ABCC11Q96J66 1382 aa21.02■□□□□ 0.96
SPCS3-204ENST00000513139 SF3B2Q13435 895 aaKnown RBP21.02■□□□□ 0.96
SPCS3-204ENST00000513139 RGPD8O14715 1765 aaPredicted RBP21.02■□□□□ 0.96
SPCS3-204ENST00000513139 RRBP1Q9P2E9 1410 aaKnown RBP21.02■□□□□ 0.96
SPCS3-204ENST00000513139 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
SPCS3-204ENST00000513139 PLCH1Q4KWH8 1693 aa21.01■□□□□ 0.95
SPCS3-204ENST00000513139 ONECUT3O60422 494 aaPredicted RBP21■□□□□ 0.95
SPCS3-204ENST00000513139 WAPLQ7Z5K2 1190 aa21■□□□□ 0.95
SPCS3-204ENST00000513139 NUTM2FA1L443 756 aa20.99■□□□□ 0.95
SPCS3-204ENST00000513139 VPS72Q15906 364 aa20.99■□□□□ 0.95
SPCS3-204ENST00000513139 DEFB132Q7Z7B7 95 aa20.99■□□□□ 0.95
SPCS3-204ENST00000513139 SEPT12Q8IYM1 358 aa20.99■□□□□ 0.95
SPCS3-204ENST00000513139 ADGRF5Q8IZF2 1346 aa20.99■□□□□ 0.95
SPCS3-204ENST00000513139 KRT28Q7Z3Y7 464 aa20.98■□□□□ 0.95
SPCS3-204ENST00000513139 STK26Q9P289 416 aa20.98■□□□□ 0.95
SPCS3-204ENST00000513139 ABCA3Q99758 1704 aa20.98■□□□□ 0.95
SPCS3-204ENST00000513139 ANKRD30BQ9BXX2 1392 aa20.97■□□□□ 0.95
SPCS3-204ENST00000513139 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
SPCS3-204ENST00000513139 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.95
SPCS3-204ENST00000513139 PSME1Q06323 249 aa20.95■□□□□ 0.94
SPCS3-204ENST00000513139 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
SPCS3-204ENST00000513139 HAP1P54257 671 aaPredicted RBP20.94■□□□□ 0.94
SPCS3-204ENST00000513139 KRT27Q7Z3Y8 459 aa20.94■□□□□ 0.94
SPCS3-204ENST00000513139 SIRT1Q96EB6 747 aa20.94■□□□□ 0.94
SPCS3-204ENST00000513139 SPATA31E1Q6ZUB1 1445 aa20.94■□□□□ 0.94
SPCS3-204ENST00000513139 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
SPCS3-204ENST00000513139 PIK3C2GO75747 1445 aa20.93■□□□□ 0.94
SPCS3-204ENST00000513139 YTHDC2Q9H6S0 1430 aaKnown RBP20.93■□□□□ 0.94
SPCS3-204ENST00000513139 SBNO1A3KN83 1393 aa20.92■□□□□ 0.94
SPCS3-204ENST00000513139 ARHGEF10O15013 1369 aa20.91■□□□□ 0.94
SPCS3-204ENST00000513139 TMEM132EQ6IEE7 984 aa20.91■□□□□ 0.94
SPCS3-204ENST00000513139 PHF8Q9UPP1 1060 aa20.91■□□□□ 0.94
SPCS3-204ENST00000513139 NRXN1Q9ULB1 1477 aa20.9■□□□□ 0.94
SPCS3-204ENST00000513139 NRAPQ86VF7 1730 aa20.9■□□□□ 0.94
SPCS3-204ENST00000513139 BAG6P46379 1132 aa20.89■□□□□ 0.93
SPCS3-204ENST00000513139 RGL3Q3MIN7 710 aa20.89■□□□□ 0.93
SPCS3-204ENST00000513139 CABLES1Q8TDN4 633 aa20.89■□□□□ 0.93
SPCS3-204ENST00000513139 CCDC9Q9Y3X0 531 aaKnown RBP20.89■□□□□ 0.93
SPCS3-204ENST00000513139 RGPD1P0DJD0 1748 aa20.89■□□□□ 0.93
SPCS3-204ENST00000513139 HRCP23327 699 aa20.86■□□□□ 0.93
SPCS3-204ENST00000513139 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
SPCS3-204ENST00000513139 COL14A1Q05707 1796 aaKnown RBP20.84■□□□□ 0.93
SPCS3-204ENST00000513139 TRPM3Q9HCF6 1732 aaPredicted RBP20.84■□□□□ 0.93
SPCS3-204ENST00000513139 PSDA5PKW4 1024 aaPredicted RBP20.83■□□□□ 0.93
SPCS3-204ENST00000513139 LMOD2Q6P5Q4 547 aa20.83■□□□□ 0.93
SPCS3-204ENST00000513139 C14orf93Q9H972 538 aaKnown RBP20.83■□□□□ 0.93
SPCS3-204ENST00000513139 ANKARQ7Z5J8 1434 aa20.82■□□□□ 0.92
SPCS3-204ENST00000513139 ALS2Q96Q42 1657 aa20.82■□□□□ 0.92
SPCS3-204ENST00000513139 DHX57Q6P158 1386 aaKnown RBP20.82■□□□□ 0.92
SPCS3-204ENST00000513139 A0A0G2JS52 829 aa20.81■□□□□ 0.92
SPCS3-204ENST00000513139 MYT1Q01538 1121 aa20.81■□□□□ 0.92
SPCS3-204ENST00000513139 DISP2A7MBM2 1401 aa20.8■□□□□ 0.92
SPCS3-204ENST00000513139 FAM98CQ17RN3 349 aaKnown RBP20.8■□□□□ 0.92
SPCS3-204ENST00000513139 TNS1Q9HBL0 1735 aaKnown RBP20.8■□□□□ 0.92
SPCS3-204ENST00000513139 ADGRB2O60241 1585 aa20.8■□□□□ 0.92
SPCS3-204ENST00000513139 BTG4Q9NY30 223 aa20.79■□□□□ 0.92
SPCS3-204ENST00000513139 DLC1Q96QB1 1528 aa20.78■□□□□ 0.92
SPCS3-204ENST00000513139 THSD7AQ9UPZ6 1657 aa20.78■□□□□ 0.92
SPCS3-204ENST00000513139 PLEKHG5O94827 1062 aa20.78■□□□□ 0.92
SPCS3-204ENST00000513139 EN1Q05925 392 aaPredicted RBP20.77■□□□□ 0.92
SPCS3-204ENST00000513139 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms