RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 LAMC1P11047 1609 aa9.48□□□□□ -0.89
KDM3B-208ENST00000512928 NHSL1Q5SYE7 1610 aa9.48□□□□□ -0.89
KDM3B-208ENST00000512928 WAPLQ7Z5K2 1190 aa9.47□□□□□ -0.89
KDM3B-208ENST00000512928 LRPPRCP42704 1394 aaKnown RBP9.47□□□□□ -0.89
KDM3B-208ENST00000512928 YTHDC2Q9H6S0 1430 aaKnown RBP9.47□□□□□ -0.89
KDM3B-208ENST00000512928 NUTM2FA1L443 756 aa9.46□□□□□ -0.9
KDM3B-208ENST00000512928 SAFB2Q14151 953 aaKnown RBP eCLIP9.46□□□□□ -0.9
KDM3B-208ENST00000512928 C14orf93Q9H972 538 aaKnown RBP9.46□□□□□ -0.9
KDM3B-208ENST00000512928 DHX57Q6P158 1386 aaKnown RBP9.46□□□□□ -0.9
KDM3B-208ENST00000512928 RGS12O14924 1447 aa9.46□□□□□ -0.9
KDM3B-208ENST00000512928 NRXN1Q9ULB1 1477 aa9.46□□□□□ -0.9
KDM3B-208ENST00000512928 KNDC1Q76NI1 1749 aa9.45□□□□□ -0.9
KDM3B-208ENST00000512928 PLEKHH1Q9ULM0 1364 aa9.45□□□□□ -0.9
KDM3B-208ENST00000512928 PRAG1Q86YV5 1406 aa9.45□□□□□ -0.9
KDM3B-208ENST00000512928 C1orf167Q5SNV9 1468 aa9.45□□□□□ -0.9
KDM3B-208ENST00000512928 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
KDM3B-208ENST00000512928 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
KDM3B-208ENST00000512928 POGKQ9P215 609 aa9.44□□□□□ -0.9
KDM3B-208ENST00000512928 AFF2P51816 1311 aa9.44□□□□□ -0.9
KDM3B-208ENST00000512928 ABCC11Q96J66 1382 aa9.44□□□□□ -0.9
KDM3B-208ENST00000512928 TECPR2O15040 1411 aa9.44□□□□□ -0.9
KDM3B-208ENST00000512928 CDC42BPGQ6DT37 1551 aa9.44□□□□□ -0.9
KDM3B-208ENST00000512928 SPATA31A6Q5VVP1 1343 aa9.43□□□□□ -0.9
KDM3B-208ENST00000512928 TRIM26Q12899 539 aaPredicted RBP9.43□□□□□ -0.9
KDM3B-208ENST00000512928 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
KDM3B-208ENST00000512928 LRRC59Q96AG4 307 aaKnown RBP9.42□□□□□ -0.9
KDM3B-208ENST00000512928 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
KDM3B-208ENST00000512928 PNPLA6Q8IY17 1366 aa9.41□□□□□ -0.9
KDM3B-208ENST00000512928 XPCQ01831 940 aaPredicted RBP9.41□□□□□ -0.9
KDM3B-208ENST00000512928 NEUROD1Q13562 356 aa9.41□□□□□ -0.9
KDM3B-208ENST00000512928 C8orf37Q96NL8 207 aa9.41□□□□□ -0.9
KDM3B-208ENST00000512928 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
KDM3B-208ENST00000512928 RXRBP28702 533 aa9.4□□□□□ -0.9
KDM3B-208ENST00000512928 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
KDM3B-208ENST00000512928 ADGRB1O14514 1584 aa9.4□□□□□ -0.9
KDM3B-208ENST00000512928 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
KDM3B-208ENST00000512928 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
KDM3B-208ENST00000512928 FOXO3O43524 673 aa9.39□□□□□ -0.91
KDM3B-208ENST00000512928 ZNF772Q68DY9 489 aaPredicted RBP9.39□□□□□ -0.91
KDM3B-208ENST00000512928 STAC3Q96MF2 364 aa9.39□□□□□ -0.91
KDM3B-208ENST00000512928 SIN3AQ96ST3 1273 aa9.39□□□□□ -0.91
KDM3B-208ENST00000512928 DLC1Q96QB1 1528 aa9.39□□□□□ -0.91
KDM3B-208ENST00000512928 NPHP3Q7Z494 1330 aa9.38□□□□□ -0.91
KDM3B-208ENST00000512928 PLEKHG5O94827 1062 aa9.38□□□□□ -0.91
KDM3B-208ENST00000512928 SIRT1Q96EB6 747 aa9.38□□□□□ -0.91
KDM3B-208ENST00000512928 KIF1AQ12756 1690 aa9.37□□□□□ -0.91
KDM3B-208ENST00000512928 SOS2Q07890 1332 aaPredicted RBP9.36□□□□□ -0.91
KDM3B-208ENST00000512928 CDK12Q9NYV4 1490 aaPredicted RBP9.36□□□□□ -0.91
KDM3B-208ENST00000512928 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
KDM3B-208ENST00000512928 PXDNQ92626 1479 aa9.35□□□□□ -0.91
KDM3B-208ENST00000512928 ADGRB2O60241 1585 aa9.35□□□□□ -0.91
KDM3B-208ENST00000512928 LMOD2Q6P5Q4 547 aa9.35□□□□□ -0.91
KDM3B-208ENST00000512928 ARHGEF28Q8N1W1 1705 aaKnown RBP9.35□□□□□ -0.91
KDM3B-208ENST00000512928 PMFBP1Q8TBY8 1022 aa9.35□□□□□ -0.91
KDM3B-208ENST00000512928 QTRT2Q9H974 415 aaKnown RBP9.35□□□□□ -0.91
KDM3B-208ENST00000512928 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
KDM3B-208ENST00000512928 MARF1Q9Y4F3 1742 aaKnown RBP9.35□□□□□ -0.91
KDM3B-208ENST00000512928 EIF3AQ14152 1382 aaKnown RBP9.35□□□□□ -0.91
KDM3B-208ENST00000512928 RGPD8O14715 1765 aaPredicted RBP9.35□□□□□ -0.91
KDM3B-208ENST00000512928 KIAA1210Q9ULL0 1709 aa9.34□□□□□ -0.91
KDM3B-208ENST00000512928 HAP1P54257 671 aaPredicted RBP9.34□□□□□ -0.91
KDM3B-208ENST00000512928 PSME1Q06323 249 aa9.34□□□□□ -0.91
KDM3B-208ENST00000512928 NBPF1Q3BBV0 1214 aa9.34□□□□□ -0.91
KDM3B-208ENST00000512928 KRT28Q7Z3Y7 464 aa9.34□□□□□ -0.91
KDM3B-208ENST00000512928 NGLY1Q96IV0 654 aa9.34□□□□□ -0.91
KDM3B-208ENST00000512928 BRWD3Q6RI45 1802 aa9.33□□□□□ -0.92
KDM3B-208ENST00000512928 ANKARQ7Z5J8 1434 aa9.33□□□□□ -0.92
KDM3B-208ENST00000512928 WASLO00401 505 aaPredicted RBP9.33□□□□□ -0.92
KDM3B-208ENST00000512928 USP32Q8NFA0 1604 aa9.33□□□□□ -0.92
KDM3B-208ENST00000512928 COL22A1Q8NFW1 1626 aaPredicted RBP9.33□□□□□ -0.92
KDM3B-208ENST00000512928 TULP4Q9NRJ4 1543 aa9.32□□□□□ -0.92
KDM3B-208ENST00000512928 TONSLQ96HA7 1378 aa9.32□□□□□ -0.92
KDM3B-208ENST00000512928 RBM6P78332 1123 aaKnown RBP9.31□□□□□ -0.92
KDM3B-208ENST00000512928 NGDNQ8NEJ9 315 aaKnown RBP9.31□□□□□ -0.92
KDM3B-208ENST00000512928 ROCK2O75116 1388 aaKnown RBP9.31□□□□□ -0.92
KDM3B-208ENST00000512928 GPRASP1Q5JY77 1395 aa9.31□□□□□ -0.92
KDM3B-208ENST00000512928 ATRNO75882 1429 aa9.31□□□□□ -0.92
KDM3B-208ENST00000512928 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
KDM3B-208ENST00000512928 SPATA31A3Q5VYP0 1347 aa9.31□□□□□ -0.92
KDM3B-208ENST00000512928 PRR36Q9H6K5 1346 aa9.31□□□□□ -0.92
KDM3B-208ENST00000512928 GLI3P10071 1580 aa9.3□□□□□ -0.92
KDM3B-208ENST00000512928 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
KDM3B-208ENST00000512928 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
KDM3B-208ENST00000512928 CDK19Q9BWU1 502 aa9.3□□□□□ -0.92
KDM3B-208ENST00000512928 USP21Q9UK80 565 aa9.3□□□□□ -0.92
KDM3B-208ENST00000512928 TRPM1Q7Z4N2 1603 aa9.3□□□□□ -0.92
KDM3B-208ENST00000512928 CENPJQ9HC77 1338 aaPredicted RBP9.3□□□□□ -0.92
KDM3B-208ENST00000512928 QRICH2Q9H0J4 1663 aa9.29□□□□□ -0.92
KDM3B-208ENST00000512928 BCL9LQ86UU0 1499 aa9.29□□□□□ -0.92
KDM3B-208ENST00000512928 ITSN1Q15811 1721 aa9.29□□□□□ -0.92
KDM3B-208ENST00000512928 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
KDM3B-208ENST00000512928 NUDT16Q96DE0 195 aaKnown RBP9.29□□□□□ -0.92
KDM3B-208ENST00000512928 ATP7BP35670 1465 aa9.28□□□□□ -0.92
KDM3B-208ENST00000512928 ABCA3Q99758 1704 aa9.28□□□□□ -0.92
KDM3B-208ENST00000512928 ARHGEF10O15013 1369 aa9.28□□□□□ -0.92
KDM3B-208ENST00000512928 SBNO1A3KN83 1393 aa9.27□□□□□ -0.93
KDM3B-208ENST00000512928 PLCH1Q4KWH8 1693 aa9.27□□□□□ -0.93
KDM3B-208ENST00000512928 PCGF6Q9BYE7 350 aa9.27□□□□□ -0.93
KDM3B-208ENST00000512928 CABP2Q9NPB3 220 aa9.27□□□□□ -0.93
KDM3B-208ENST00000512928 ATAD2Q6PL18 1390 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms