RNA–Protein interactions for RNA: ENST00000512868.6

SERF1A-208, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-208ENST00000512868 BRINP3Q76B58 766 aa20.87■□□□□ 0.93
SERF1A-208ENST00000512868 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
SERF1A-208ENST00000512868 ROBO1Q9Y6N7 1651 aa20.86■□□□□ 0.93
SERF1A-208ENST00000512868 DISP3Q9P2K9 1392 aa20.86■□□□□ 0.93
SERF1A-208ENST00000512868 CDC42BPGQ6DT37 1551 aa20.85■□□□□ 0.93
SERF1A-208ENST00000512868 KIAA1210Q9ULL0 1709 aa20.85■□□□□ 0.93
SERF1A-208ENST00000512868 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
SERF1A-208ENST00000512868 C1orf167Q5SNV9 1468 aa20.84■□□□□ 0.93
SERF1A-208ENST00000512868 SAFB2Q14151 953 aaKnown RBP eCLIP20.84■□□□□ 0.93
SERF1A-208ENST00000512868 TIMELESSQ9UNS1 1208 aa20.84■□□□□ 0.93
SERF1A-208ENST00000512868 CCER1Q8TC90 406 aaPredicted RBP20.83■□□□□ 0.93
SERF1A-208ENST00000512868 ROCK2O75116 1388 aaKnown RBP20.81■□□□□ 0.92
SERF1A-208ENST00000512868 ESCO1Q5FWF5 840 aa20.79■□□□□ 0.92
SERF1A-208ENST00000512868 EIF3AQ14152 1382 aaKnown RBP20.79■□□□□ 0.92
SERF1A-208ENST00000512868 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
SERF1A-208ENST00000512868 MINK1Q8N4C8 1332 aaPredicted RBP20.78■□□□□ 0.92
SERF1A-208ENST00000512868 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.92
SERF1A-208ENST00000512868 AHDC1Q5TGY3 1603 aaPredicted RBP20.77■□□□□ 0.92
SERF1A-208ENST00000512868 NUTM2FA1L443 756 aa20.76■□□□□ 0.91
SERF1A-208ENST00000512868 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
SERF1A-208ENST00000512868 MED1Q15648 1581 aaPredicted RBP20.76■□□□□ 0.91
SERF1A-208ENST00000512868 WASLO00401 505 aaPredicted RBP20.75■□□□□ 0.91
SERF1A-208ENST00000512868 CENPJQ9HC77 1338 aaPredicted RBP20.75■□□□□ 0.91
SERF1A-208ENST00000512868 JCADQ9P266 1359 aa20.74■□□□□ 0.91
SERF1A-208ENST00000512868 ADGRB2O60241 1585 aa20.74■□□□□ 0.91
SERF1A-208ENST00000512868 LRRC59Q96AG4 307 aaKnown RBP20.74■□□□□ 0.91
SERF1A-208ENST00000512868 TRPM1Q7Z4N2 1603 aa20.74■□□□□ 0.91
SERF1A-208ENST00000512868 NPHP3Q7Z494 1330 aa20.74■□□□□ 0.91
SERF1A-208ENST00000512868 GPRASP1Q5JY77 1395 aa20.73■□□□□ 0.91
SERF1A-208ENST00000512868 ANKARQ7Z5J8 1434 aa20.73■□□□□ 0.91
SERF1A-208ENST00000512868 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
SERF1A-208ENST00000512868 ILDR2Q71H61 639 aa20.72■□□□□ 0.91
SERF1A-208ENST00000512868 PHLPP1O60346 1717 aa20.72■□□□□ 0.91
SERF1A-208ENST00000512868 ARHGEF28Q8N1W1 1705 aaKnown RBP20.7■□□□□ 0.9
SERF1A-208ENST00000512868 RALGAPBQ86X10 1494 aa20.7■□□□□ 0.9
SERF1A-208ENST00000512868 PHF8Q9UPP1 1060 aa20.7■□□□□ 0.9
SERF1A-208ENST00000512868 SOS2Q07890 1332 aaPredicted RBP20.7■□□□□ 0.9
SERF1A-208ENST00000512868 COL16A1Q07092 1604 aaPredicted RBP20.7■□□□□ 0.9
SERF1A-208ENST00000512868 FMN2Q9NZ56 1722 aa20.7■□□□□ 0.9
SERF1A-208ENST00000512868 FOXO3O43524 673 aa20.69■□□□□ 0.9
SERF1A-208ENST00000512868 DDX17Q92841 729 aaKnown RBP20.68■□□□□ 0.9
SERF1A-208ENST00000512868 CDK19Q9BWU1 502 aa20.68■□□□□ 0.9
SERF1A-208ENST00000512868 SPATA31A6Q5VVP1 1343 aa20.68■□□□□ 0.9
SERF1A-208ENST00000512868 TULP4Q9NRJ4 1543 aa20.67■□□□□ 0.9
SERF1A-208ENST00000512868 NHSL1Q5SYE7 1610 aa20.67■□□□□ 0.9
SERF1A-208ENST00000512868 PSME1Q06323 249 aa20.65■□□□□ 0.9
SERF1A-208ENST00000512868 SRPK2P78362 688 aaKnown RBP20.64■□□□□ 0.89
SERF1A-208ENST00000512868 NUDT16Q96DE0 195 aaKnown RBP20.64■□□□□ 0.89
SERF1A-208ENST00000512868 EVC2Q86UK5 1308 aa20.63■□□□□ 0.89
SERF1A-208ENST00000512868 CCDC61Q9Y6R9 512 aa20.63■□□□□ 0.89
SERF1A-208ENST00000512868 KIF1AQ12756 1690 aa20.63■□□□□ 0.89
SERF1A-208ENST00000512868 PRR36Q9H6K5 1346 aa20.62■□□□□ 0.89
SERF1A-208ENST00000512868 SLC24A1O60721 1099 aa20.62■□□□□ 0.89
SERF1A-208ENST00000512868 KRT28Q7Z3Y7 464 aa20.62■□□□□ 0.89
SERF1A-208ENST00000512868 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
SERF1A-208ENST00000512868 PMFBP1Q8TBY8 1022 aa20.61■□□□□ 0.89
SERF1A-208ENST00000512868 XPCQ01831 940 aaPredicted RBP20.6■□□□□ 0.89
SERF1A-208ENST00000512868 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
SERF1A-208ENST00000512868 PXDNQ92626 1479 aa20.6■□□□□ 0.89
SERF1A-208ENST00000512868 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
SERF1A-208ENST00000512868 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
SERF1A-208ENST00000512868 ATP7BP35670 1465 aa20.59■□□□□ 0.89
SERF1A-208ENST00000512868 USP32Q8NFA0 1604 aa20.57■□□□□ 0.88
SERF1A-208ENST00000512868 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
SERF1A-208ENST00000512868 SHPRHQ149N8 1683 aa20.57■□□□□ 0.88
SERF1A-208ENST00000512868 PLEKHG3A1L390 1219 aa20.56■□□□□ 0.88
SERF1A-208ENST00000512868 MEX3CQ5U5Q3 659 aaKnown RBP20.56■□□□□ 0.88
SERF1A-208ENST00000512868 QRICH2Q9H0J4 1663 aa20.56■□□□□ 0.88
SERF1A-208ENST00000512868 SBNO1A3KN83 1393 aa20.56■□□□□ 0.88
SERF1A-208ENST00000512868 SPATA31A3Q5VYP0 1347 aa20.55■□□□□ 0.88
SERF1A-208ENST00000512868 NUTM2BA6NNL0 878 aaPredicted RBP20.55■□□□□ 0.88
SERF1A-208ENST00000512868 NUTM2EB1AL46 878 aaPredicted RBP20.55■□□□□ 0.88
SERF1A-208ENST00000512868 NUTM2AQ8IVF1 878 aaPredicted RBP20.55■□□□□ 0.88
SERF1A-208ENST00000512868 SOCS7O14512 581 aa20.53■□□□□ 0.88
SERF1A-208ENST00000512868 POLR3AO14802 1390 aaPredicted RBP20.52■□□□□ 0.88
SERF1A-208ENST00000512868 ARHGEF10O15013 1369 aa20.52■□□□□ 0.88
SERF1A-208ENST00000512868 ST20-MTHFSA0A0A6YYL1 179 aa20.52■□□□□ 0.88
SERF1A-208ENST00000512868 TNS3Q68CZ2 1445 aa20.52■□□□□ 0.87
SERF1A-208ENST00000512868 PPIP5K1Q6PFW1 1433 aa20.52■□□□□ 0.87
SERF1A-208ENST00000512868 ACEP12821 1306 aa20.52■□□□□ 0.87
SERF1A-208ENST00000512868 ATAD2Q6PL18 1390 aa20.51■□□□□ 0.87
SERF1A-208ENST00000512868 USP47Q96K76 1375 aa20.51■□□□□ 0.87
SERF1A-208ENST00000512868 LMOD2Q6P5Q4 547 aa20.5■□□□□ 0.87
SERF1A-208ENST00000512868 PUS7Q96PZ0 661 aaKnown RBP20.5■□□□□ 0.87
SERF1A-208ENST00000512868 CABP1Q9NZU7 370 aa20.5■□□□□ 0.87
SERF1A-208ENST00000512868 ITSN1Q15811 1721 aa20.5■□□□□ 0.87
SERF1A-208ENST00000512868 LRP6O75581 1613 aa20.49■□□□□ 0.87
SERF1A-208ENST00000512868 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
SERF1A-208ENST00000512868 RGPD8O14715 1765 aaPredicted RBP20.47■□□□□ 0.87
SERF1A-208ENST00000512868 TESK2Q96S53 571 aa20.47■□□□□ 0.87
SERF1A-208ENST00000512868 RGS17Q9UGC6 210 aaPredicted RBP20.47■□□□□ 0.87
SERF1A-208ENST00000512868 BRD4O60885 1362 aaPredicted RBP20.46■□□□□ 0.87
SERF1A-208ENST00000512868 COL22A1Q8NFW1 1626 aaPredicted RBP20.46■□□□□ 0.87
SERF1A-208ENST00000512868 ADAMTS2O95450 1211 aa20.46■□□□□ 0.87
SERF1A-208ENST00000512868 HAP1P54257 671 aaPredicted RBP20.46■□□□□ 0.87
SERF1A-208ENST00000512868 ZNF772Q68DY9 489 aaPredicted RBP20.46■□□□□ 0.87
SERF1A-208ENST00000512868 ZNF692Q9BU19 519 aaPredicted RBP20.46■□□□□ 0.87
SERF1A-208ENST00000512868 TMF1P82094 1093 aa20.45■□□□□ 0.86
SERF1A-208ENST00000512868 TOPAZ1Q8N9V7 1692 aa20.45■□□□□ 0.86
SERF1A-208ENST00000512868 CDCA8Q53HL2 280 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms