RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 NPHP3Q7Z494 1330 aa24.2■■□□□ 1.46
DDR1-269ENST00000512725 NUTM2FA1L443 756 aa24.19■■□□□ 1.46
DDR1-269ENST00000512725 EP400Q96L91 3159 aa24.18■■□□□ 1.46
DDR1-269ENST00000512725 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
DDR1-269ENST00000512725 FOXO3O43524 673 aa24.17■■□□□ 1.46
DDR1-269ENST00000512725 CCDC125Q86Z20 511 aa24.17■■□□□ 1.46
DDR1-269ENST00000512725 COL22A1Q8NFW1 1626 aaPredicted RBP24.17■■□□□ 1.46
DDR1-269ENST00000512725 GJD4Q96KN9 370 aaPredicted RBP24.16■■□□□ 1.46
DDR1-269ENST00000512725 MYOM2P54296 1465 aa24.14■■□□□ 1.46
DDR1-269ENST00000512725 BCL9LQ86UU0 1499 aa24.14■■□□□ 1.46
DDR1-269ENST00000512725 STK26Q9P289 416 aa24.14■■□□□ 1.45
DDR1-269ENST00000512725 RPGRIP1LQ68CZ1 1315 aa24.12■■□□□ 1.45
DDR1-269ENST00000512725 MARF1Q9Y4F3 1742 aaKnown RBP24.12■■□□□ 1.45
DDR1-269ENST00000512725 PLEKHG5O94827 1062 aa24.11■■□□□ 1.45
DDR1-269ENST00000512725 LRPPRCP42704 1394 aaKnown RBP24.1■■□□□ 1.45
DDR1-269ENST00000512725 PXDNQ92626 1479 aa24.1■■□□□ 1.45
DDR1-269ENST00000512725 HAP1P54257 671 aaPredicted RBP24.09■■□□□ 1.45
DDR1-269ENST00000512725 SLC4A1APQ9BWU0 796 aaKnown RBP24.09■■□□□ 1.45
DDR1-269ENST00000512725 SF3B2Q13435 895 aaKnown RBP24.08■■□□□ 1.45
DDR1-269ENST00000512725 WAPLQ7Z5K2 1190 aa24.08■■□□□ 1.45
DDR1-269ENST00000512725 UNC5CLQ8IV45 518 aa24.08■■□□□ 1.45
DDR1-269ENST00000512725 CDC42BPGQ6DT37 1551 aa24.08■■□□□ 1.44
DDR1-269ENST00000512725 PPLO60437 1756 aa24.07■■□□□ 1.44
DDR1-269ENST00000512725 NAIPQ13075 1403 aa24.07■■□□□ 1.44
DDR1-269ENST00000512725 PRAG1Q86YV5 1406 aa24.05■■□□□ 1.44
DDR1-269ENST00000512725 DEFB132Q7Z7B7 95 aa24.05■■□□□ 1.44
DDR1-269ENST00000512725 CCDC9Q9Y3X0 531 aaKnown RBP24.05■■□□□ 1.44
DDR1-269ENST00000512725 RGL3Q3MIN7 710 aa24.04■■□□□ 1.44
DDR1-269ENST00000512725 RALGAPBQ86X10 1494 aa24.04■■□□□ 1.44
DDR1-269ENST00000512725 BLMP54132 1417 aaPredicted RBP24.03■■□□□ 1.44
DDR1-269ENST00000512725 ADGRF5Q8IZF2 1346 aa24.02■■□□□ 1.44
DDR1-269ENST00000512725 KRT28Q7Z3Y7 464 aa24.01■■□□□ 1.43
DDR1-269ENST00000512725 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.01■■□□□ 1.43
DDR1-269ENST00000512725 GLI3P10071 1580 aa24■■□□□ 1.43
DDR1-269ENST00000512725 TMEM132EQ6IEE7 984 aa24■■□□□ 1.43
DDR1-269ENST00000512725 LMOD2Q6P5Q4 547 aa24■■□□□ 1.43
DDR1-269ENST00000512725 SEPT12Q8IYM1 358 aa24■■□□□ 1.43
DDR1-269ENST00000512725 SPATA31A3Q5VYP0 1347 aa24■■□□□ 1.43
DDR1-269ENST00000512725 BRWD3Q6RI45 1802 aa23.99■■□□□ 1.43
DDR1-269ENST00000512725 A0A0G2JS52 829 aa23.99■■□□□ 1.43
DDR1-269ENST00000512725 MYT1Q01538 1121 aa23.99■■□□□ 1.43
DDR1-269ENST00000512725 PLEKHH1Q9ULM0 1364 aa23.98■■□□□ 1.43
DDR1-269ENST00000512725 SLIT2O94813 1529 aa23.98■■□□□ 1.43
DDR1-269ENST00000512725 CABLES1Q8TDN4 633 aa23.97■■□□□ 1.43
DDR1-269ENST00000512725 RRBP1Q9P2E9 1410 aaKnown RBP23.97■■□□□ 1.43
DDR1-269ENST00000512725 CCDC144AA2RUR9 1427 aa23.96■■□□□ 1.43
DDR1-269ENST00000512725 USP32Q8NFA0 1604 aa23.95■■□□□ 1.43
DDR1-269ENST00000512725 FMN2Q9NZ56 1722 aa23.93■■□□□ 1.42
DDR1-269ENST00000512725 KIF1AQ12756 1690 aa23.93■■□□□ 1.42
DDR1-269ENST00000512725 PSME1Q06323 249 aa23.93■■□□□ 1.42
DDR1-269ENST00000512725 VPS72Q15906 364 aa23.92■■□□□ 1.42
DDR1-269ENST00000512725 KRT27Q7Z3Y8 459 aa23.92■■□□□ 1.42
DDR1-269ENST00000512725 PSDA5PKW4 1024 aaPredicted RBP23.91■■□□□ 1.42
DDR1-269ENST00000512725 PHF8Q9UPP1 1060 aa23.91■■□□□ 1.42
DDR1-269ENST00000512725 TECPR2O15040 1411 aa23.91■■□□□ 1.42
DDR1-269ENST00000512725 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
DDR1-269ENST00000512725 TNS3Q68CZ2 1445 aa23.89■■□□□ 1.41
DDR1-269ENST00000512725 BAG6P46379 1132 aa23.88■■□□□ 1.41
DDR1-269ENST00000512725 SAFB2Q14151 953 aaKnown RBP eCLIP23.88■■□□□ 1.41
DDR1-269ENST00000512725 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
DDR1-269ENST00000512725 RGPD8O14715 1765 aaPredicted RBP23.88■■□□□ 1.41
DDR1-269ENST00000512725 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
DDR1-269ENST00000512725 YTHDC2Q9H6S0 1430 aaKnown RBP23.87■■□□□ 1.41
DDR1-269ENST00000512725 PLCH1Q4KWH8 1693 aa23.87■■□□□ 1.41
DDR1-269ENST00000512725 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
DDR1-269ENST00000512725 FAM98CQ17RN3 349 aaKnown RBP23.84■■□□□ 1.41
DDR1-269ENST00000512725 PMFBP1Q8TBY8 1022 aa23.84■■□□□ 1.41
DDR1-269ENST00000512725 NWD2Q9ULI1 1742 aa23.83■■□□□ 1.41
DDR1-269ENST00000512725 FAM83GA6ND36 823 aa23.82■■□□□ 1.4
DDR1-269ENST00000512725 LRP5O75197 1615 aa23.81■■□□□ 1.4
DDR1-269ENST00000512725 ARHGEF10O15013 1369 aa23.81■■□□□ 1.4
DDR1-269ENST00000512725 ONECUT3O60422 494 aaPredicted RBP23.81■■□□□ 1.4
DDR1-269ENST00000512725 PIK3C2GO75747 1445 aa23.81■■□□□ 1.4
DDR1-269ENST00000512725 SPATA31E1Q6ZUB1 1445 aa23.81■■□□□ 1.4
DDR1-269ENST00000512725 SBNO1A3KN83 1393 aa23.79■■□□□ 1.4
DDR1-269ENST00000512725 HRCP23327 699 aa23.79■■□□□ 1.4
DDR1-269ENST00000512725 EN1Q05925 392 aaPredicted RBP23.79■■□□□ 1.4
DDR1-269ENST00000512725 PRAM1Q96QH2 718 aa23.79■■□□□ 1.4
DDR1-269ENST00000512725 BTG4Q9NY30 223 aa23.79■■□□□ 1.4
DDR1-269ENST00000512725 ABCA3Q99758 1704 aa23.79■■□□□ 1.4
DDR1-269ENST00000512725 DHX57Q6P158 1386 aaKnown RBP23.78■■□□□ 1.4
DDR1-269ENST00000512725 FAM182BQ5T319 152 aa23.78■■□□□ 1.4
DDR1-269ENST00000512725 MPHOSPH9Q99550 1183 aa23.78■■□□□ 1.4
DDR1-269ENST00000512725 POGKQ9P215 609 aa23.78■■□□□ 1.4
DDR1-269ENST00000512725 NRXN1Q9ULB1 1477 aa23.77■■□□□ 1.4
DDR1-269ENST00000512725 CFAP70Q5T0N1 1121 aa23.77■■□□□ 1.4
DDR1-269ENST00000512725 SIRT1Q96EB6 747 aa23.77■■□□□ 1.4
DDR1-269ENST00000512725 R3HDM1Q15032 1099 aaKnown RBP23.75■■□□□ 1.39
DDR1-269ENST00000512725 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
DDR1-269ENST00000512725 HIRIP3Q9BW71 556 aaPredicted RBP23.72■■□□□ 1.39
DDR1-269ENST00000512725 NRAPQ86VF7 1730 aa23.7■■□□□ 1.39
DDR1-269ENST00000512725 GPRASP1Q5JY77 1395 aa23.7■■□□□ 1.38
DDR1-269ENST00000512725 PAK3O75914 559 aaPredicted RBP23.7■■□□□ 1.38
DDR1-269ENST00000512725 RGPD1P0DJD0 1748 aa23.69■■□□□ 1.38
DDR1-269ENST00000512725 COL14A1Q05707 1796 aaKnown RBP23.67■■□□□ 1.38
DDR1-269ENST00000512725 ANKARQ7Z5J8 1434 aa23.67■■□□□ 1.38
DDR1-269ENST00000512725 MINK1Q8N4C8 1332 aaPredicted RBP23.66■■□□□ 1.38
DDR1-269ENST00000512725 EZH2Q15910 746 aaKnown RBP23.66■■□□□ 1.38
DDR1-269ENST00000512725 NGDNQ8NEJ9 315 aaKnown RBP23.66■■□□□ 1.38
DDR1-269ENST00000512725 PRDM11Q9NQV5 511 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms