RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 ATAD2Q6PL18 1390 aa21.73■■□□□ 1.07
LETM1-207ENST00000512669 TRPC5Q9UL62 973 aaPredicted RBP21.72■■□□□ 1.07
LETM1-207ENST00000512669 NPHP3Q7Z494 1330 aa21.72■■□□□ 1.07
LETM1-207ENST00000512669 USP21Q9UK80 565 aa21.71■■□□□ 1.07
LETM1-207ENST00000512669 FNBP4Q8N3X1 1017 aaPredicted RBP21.7■■□□□ 1.06
LETM1-207ENST00000512669 MPHOSPH9Q99550 1183 aa21.68■■□□□ 1.06
LETM1-207ENST00000512669 LRPPRCP42704 1394 aaKnown RBP21.68■■□□□ 1.06
LETM1-207ENST00000512669 MYOM2P54296 1465 aa21.67■■□□□ 1.06
LETM1-207ENST00000512669 TECPR2O15040 1411 aa21.66■■□□□ 1.06
LETM1-207ENST00000512669 ATRNO75882 1429 aa21.66■■□□□ 1.06
LETM1-207ENST00000512669 PXDNQ92626 1479 aa21.65■■□□□ 1.06
LETM1-207ENST00000512669 CCDC144AA2RUR9 1427 aa21.65■■□□□ 1.06
LETM1-207ENST00000512669 ESCO1Q5FWF5 840 aa21.65■■□□□ 1.06
LETM1-207ENST00000512669 ANKRD30BQ9BXX2 1392 aa21.64■■□□□ 1.06
LETM1-207ENST00000512669 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
LETM1-207ENST00000512669 KNDC1Q76NI1 1749 aa21.62■■□□□ 1.05
LETM1-207ENST00000512669 ABCC11Q96J66 1382 aa21.61■■□□□ 1.05
LETM1-207ENST00000512669 IFT172Q9UG01 1749 aa21.6■■□□□ 1.05
LETM1-207ENST00000512669 SPATA31E1Q6ZUB1 1445 aa21.59■■□□□ 1.05
LETM1-207ENST00000512669 CCDC125Q86Z20 511 aa21.59■■□□□ 1.05
LETM1-207ENST00000512669 KIF1AQ12756 1690 aa21.59■■□□□ 1.05
LETM1-207ENST00000512669 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.05
LETM1-207ENST00000512669 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.58■■□□□ 1.05
LETM1-207ENST00000512669 FOXO3O43524 673 aa21.58■■□□□ 1.05
LETM1-207ENST00000512669 RAB3GAP2Q9H2M9 1393 aa21.58■■□□□ 1.04
LETM1-207ENST00000512669 BCL9LQ86UU0 1499 aa21.58■■□□□ 1.04
LETM1-207ENST00000512669 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
LETM1-207ENST00000512669 PIK3C2GO75747 1445 aa21.55■■□□□ 1.04
LETM1-207ENST00000512669 FMN2Q9NZ56 1722 aa21.55■■□□□ 1.04
LETM1-207ENST00000512669 STK26Q9P289 416 aa21.54■■□□□ 1.04
LETM1-207ENST00000512669 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
LETM1-207ENST00000512669 WAPLQ7Z5K2 1190 aa21.53■■□□□ 1.04
LETM1-207ENST00000512669 GJD4Q96KN9 370 aaPredicted RBP21.53■■□□□ 1.04
LETM1-207ENST00000512669 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
LETM1-207ENST00000512669 YTHDC2Q9H6S0 1430 aaKnown RBP21.53■■□□□ 1.04
LETM1-207ENST00000512669 XPCQ01831 940 aaPredicted RBP21.52■■□□□ 1.04
LETM1-207ENST00000512669 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
LETM1-207ENST00000512669 SPATA31A3Q5VYP0 1347 aa21.52■■□□□ 1.03
LETM1-207ENST00000512669 SLIT2O94813 1529 aa21.5■■□□□ 1.03
LETM1-207ENST00000512669 UNC5CLQ8IV45 518 aa21.5■■□□□ 1.03
LETM1-207ENST00000512669 USP32Q8NFA0 1604 aa21.49■■□□□ 1.03
LETM1-207ENST00000512669 NUTM2FA1L443 756 aa21.49■■□□□ 1.03
LETM1-207ENST00000512669 PLEKHH1Q9ULM0 1364 aa21.48■■□□□ 1.03
LETM1-207ENST00000512669 EP400Q96L91 3159 aa21.48■■□□□ 1.03
LETM1-207ENST00000512669 TMEM132EQ6IEE7 984 aa21.48■■□□□ 1.03
LETM1-207ENST00000512669 PSME1Q06323 249 aa21.47■■□□□ 1.03
LETM1-207ENST00000512669 RALGAPBQ86X10 1494 aa21.46■■□□□ 1.03
LETM1-207ENST00000512669 KRT28Q7Z3Y7 464 aa21.46■■□□□ 1.03
LETM1-207ENST00000512669 TNS3Q68CZ2 1445 aa21.46■■□□□ 1.03
LETM1-207ENST00000512669 SRCAPQ6ZRS2 3230 aa21.46■■□□□ 1.03
LETM1-207ENST00000512669 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.02
LETM1-207ENST00000512669 BLMP54132 1417 aaPredicted RBP21.45■■□□□ 1.02
LETM1-207ENST00000512669 NRXN1Q9ULB1 1477 aa21.45■■□□□ 1.02
LETM1-207ENST00000512669 GLI3P10071 1580 aa21.44■■□□□ 1.02
LETM1-207ENST00000512669 HRCP23327 699 aa21.44■■□□□ 1.02
LETM1-207ENST00000512669 HAP1P54257 671 aaPredicted RBP21.44■■□□□ 1.02
LETM1-207ENST00000512669 C14orf93Q9H972 538 aaKnown RBP21.44■■□□□ 1.02
LETM1-207ENST00000512669 NWD2Q9ULI1 1742 aa21.43■■□□□ 1.02
LETM1-207ENST00000512669 PHF8Q9UPP1 1060 aa21.43■■□□□ 1.02
LETM1-207ENST00000512669 SBNO1A3KN83 1393 aa21.43■■□□□ 1.02
LETM1-207ENST00000512669 ARHGEF10O15013 1369 aa21.43■■□□□ 1.02
LETM1-207ENST00000512669 ANKARQ7Z5J8 1434 aa21.4■■□□□ 1.02
LETM1-207ENST00000512669 VPS72Q15906 364 aa21.4■■□□□ 1.02
LETM1-207ENST00000512669 RGPD8O14715 1765 aaPredicted RBP21.4■■□□□ 1.02
LETM1-207ENST00000512669 DLC1Q96QB1 1528 aa21.39■■□□□ 1.02
LETM1-207ENST00000512669 PLCH1Q4KWH8 1693 aa21.39■■□□□ 1.01
LETM1-207ENST00000512669 SF3B2Q13435 895 aaKnown RBP21.38■■□□□ 1.01
LETM1-207ENST00000512669 ABCA3Q99758 1704 aa21.38■■□□□ 1.01
LETM1-207ENST00000512669 ADGRB2O60241 1585 aa21.37■■□□□ 1.01
LETM1-207ENST00000512669 BRWD3Q6RI45 1802 aa21.37■■□□□ 1.01
LETM1-207ENST00000512669 PRAM1Q96QH2 718 aa21.36■■□□□ 1.01
LETM1-207ENST00000512669 EIF3AQ14152 1382 aaKnown RBP21.36■■□□□ 1.01
LETM1-207ENST00000512669 CFAP70Q5T0N1 1121 aa21.35■■□□□ 1.01
LETM1-207ENST00000512669 SEPT12Q8IYM1 358 aa21.35■■□□□ 1.01
LETM1-207ENST00000512669 ONECUT3O60422 494 aaPredicted RBP21.34■■□□□ 1.01
LETM1-207ENST00000512669 POGKQ9P215 609 aa21.34■■□□□ 1.01
LETM1-207ENST00000512669 LMOD2Q6P5Q4 547 aa21.33■■□□□ 1.01
LETM1-207ENST00000512669 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1.01
LETM1-207ENST00000512669 KRT27Q7Z3Y8 459 aa21.31■■□□□ 1
LETM1-207ENST00000512669 CABLES1Q8TDN4 633 aa21.31■■□□□ 1
LETM1-207ENST00000512669 SAFB2Q14151 953 aaKnown RBP eCLIP21.3■■□□□ 1
LETM1-207ENST00000512669 GPRASP1Q5JY77 1395 aa21.3■■□□□ 1
LETM1-207ENST00000512669 TRPM3Q9HCF6 1732 aaPredicted RBP21.29■■□□□ 1
LETM1-207ENST00000512669 ADGRB1O14514 1584 aa21.28■■□□□ 1
LETM1-207ENST00000512669 NRAPQ86VF7 1730 aa21.27■■□□□ 1
LETM1-207ENST00000512669 STAC3Q96MF2 364 aa21.27■■□□□ 1
LETM1-207ENST00000512669 TULP4Q9NRJ4 1543 aa21.27■■□□□ 1
LETM1-207ENST00000512669 COL14A1Q05707 1796 aaKnown RBP21.27■■□□□ 1
LETM1-207ENST00000512669 ALS2Q96Q42 1657 aa21.27■■□□□ 1
LETM1-207ENST00000512669 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
LETM1-207ENST00000512669 DEFB132Q7Z7B7 95 aa21.26■□□□□ 0.99
LETM1-207ENST00000512669 PMFBP1Q8TBY8 1022 aa21.26■□□□□ 0.99
LETM1-207ENST00000512669 LRP5O75197 1615 aa21.25■□□□□ 0.99
LETM1-207ENST00000512669 A0A0G2JS52 829 aa21.24■□□□□ 0.99
LETM1-207ENST00000512669 PLEKHG5O94827 1062 aa21.24■□□□□ 0.99
LETM1-207ENST00000512669 BAG6P46379 1132 aa21.24■□□□□ 0.99
LETM1-207ENST00000512669 MYT1Q01538 1121 aa21.24■□□□□ 0.99
LETM1-207ENST00000512669 KDM2AQ9Y2K7 1162 aa21.23■□□□□ 0.99
LETM1-207ENST00000512669 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
LETM1-207ENST00000512669 BTG4Q9NY30 223 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms