RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 SAFB2Q14151 953 aaKnown RBP eCLIP22.93■■□□□ 1.26
DDX41-214ENST00000512334 POGKQ9P215 609 aa22.93■■□□□ 1.26
DDX41-214ENST00000512334 CDC42BPGQ6DT37 1551 aa22.92■■□□□ 1.26
DDX41-214ENST00000512334 DLC1Q96QB1 1528 aa22.92■■□□□ 1.26
DDX41-214ENST00000512334 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
DDX41-214ENST00000512334 KIAA1210Q9ULL0 1709 aa22.89■■□□□ 1.26
DDX41-214ENST00000512334 DISP3Q9P2K9 1392 aa22.89■■□□□ 1.25
DDX41-214ENST00000512334 AHDC1Q5TGY3 1603 aaPredicted RBP22.88■■□□□ 1.25
DDX41-214ENST00000512334 NUTM2FA1L443 756 aa22.87■■□□□ 1.25
DDX41-214ENST00000512334 NBPF1Q3BBV0 1214 aa22.86■■□□□ 1.25
DDX41-214ENST00000512334 ORAI2Q96SN7 254 aa22.86■■□□□ 1.25
DDX41-214ENST00000512334 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
DDX41-214ENST00000512334 COL16A1Q07092 1604 aaPredicted RBP22.86■■□□□ 1.25
DDX41-214ENST00000512334 MED1Q15648 1581 aaPredicted RBP22.84■■□□□ 1.25
DDX41-214ENST00000512334 ESCO1Q5FWF5 840 aa22.84■■□□□ 1.25
DDX41-214ENST00000512334 NHSL1Q5SYE7 1610 aa22.83■■□□□ 1.25
DDX41-214ENST00000512334 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
DDX41-214ENST00000512334 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
DDX41-214ENST00000512334 JCADQ9P266 1359 aa22.82■■□□□ 1.24
DDX41-214ENST00000512334 HIRIP3Q9BW71 556 aaPredicted RBP22.82■■□□□ 1.24
DDX41-214ENST00000512334 FMN2Q9NZ56 1722 aa22.82■■□□□ 1.24
DDX41-214ENST00000512334 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
DDX41-214ENST00000512334 TRPM1Q7Z4N2 1603 aa22.78■■□□□ 1.24
DDX41-214ENST00000512334 ADGRB2O60241 1585 aa22.77■■□□□ 1.24
DDX41-214ENST00000512334 ROCK2O75116 1388 aaKnown RBP22.76■■□□□ 1.23
DDX41-214ENST00000512334 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
DDX41-214ENST00000512334 NBPF8Q3BBV2 869 aa22.75■■□□□ 1.23
DDX41-214ENST00000512334 LRRC59Q96AG4 307 aaKnown RBP22.75■■□□□ 1.23
DDX41-214ENST00000512334 NPHP3Q7Z494 1330 aa22.74■■□□□ 1.23
DDX41-214ENST00000512334 RGPD8O14715 1765 aaPredicted RBP22.73■■□□□ 1.23
DDX41-214ENST00000512334 FOXO3O43524 673 aa22.73■■□□□ 1.23
DDX41-214ENST00000512334 SHPRHQ149N8 1683 aa22.73■■□□□ 1.23
DDX41-214ENST00000512334 WASLO00401 505 aaPredicted RBP22.72■■□□□ 1.23
DDX41-214ENST00000512334 EIF3AQ14152 1382 aaKnown RBP22.72■■□□□ 1.23
DDX41-214ENST00000512334 KIF1AQ12756 1690 aa22.71■■□□□ 1.23
DDX41-214ENST00000512334 XPCQ01831 940 aaPredicted RBP22.71■■□□□ 1.23
DDX41-214ENST00000512334 SOS2Q07890 1332 aaPredicted RBP22.71■■□□□ 1.23
DDX41-214ENST00000512334 SPATA31A6Q5VVP1 1343 aa22.71■■□□□ 1.23
DDX41-214ENST00000512334 PHF8Q9UPP1 1060 aa22.7■■□□□ 1.22
DDX41-214ENST00000512334 CENPJQ9HC77 1338 aaPredicted RBP22.7■■□□□ 1.22
DDX41-214ENST00000512334 ANKARQ7Z5J8 1434 aa22.7■■□□□ 1.22
DDX41-214ENST00000512334 USP32Q8NFA0 1604 aa22.68■■□□□ 1.22
DDX41-214ENST00000512334 TULP4Q9NRJ4 1543 aa22.68■■□□□ 1.22
DDX41-214ENST00000512334 NUTM2BA6NNL0 878 aaPredicted RBP22.68■■□□□ 1.22
DDX41-214ENST00000512334 NUTM2EB1AL46 878 aaPredicted RBP22.68■■□□□ 1.22
DDX41-214ENST00000512334 NUTM2AQ8IVF1 878 aaPredicted RBP22.68■■□□□ 1.22
DDX41-214ENST00000512334 CLSPNQ9HAW4 1339 aa22.67■■□□□ 1.22
DDX41-214ENST00000512334 MEX3CQ5U5Q3 659 aaKnown RBP22.67■■□□□ 1.22
DDX41-214ENST00000512334 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
DDX41-214ENST00000512334 PXDNQ92626 1479 aa22.66■■□□□ 1.22
DDX41-214ENST00000512334 PNPLA6Q8IY17 1366 aa22.66■■□□□ 1.22
DDX41-214ENST00000512334 QRICH2Q9H0J4 1663 aa22.66■■□□□ 1.22
DDX41-214ENST00000512334 PMFBP1Q8TBY8 1022 aa22.66■■□□□ 1.22
DDX41-214ENST00000512334 CDK19Q9BWU1 502 aa22.66■■□□□ 1.22
DDX41-214ENST00000512334 PRR36Q9H6K5 1346 aa22.65■■□□□ 1.22
DDX41-214ENST00000512334 CARD11Q9BXL7 1154 aa22.65■■□□□ 1.22
DDX41-214ENST00000512334 LRP6O75581 1613 aa22.64■■□□□ 1.22
DDX41-214ENST00000512334 RALGAPBQ86X10 1494 aa22.64■■□□□ 1.21
DDX41-214ENST00000512334 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
DDX41-214ENST00000512334 KRT28Q7Z3Y7 464 aa22.63■■□□□ 1.21
DDX41-214ENST00000512334 PSME1Q06323 249 aa22.62■■□□□ 1.21
DDX41-214ENST00000512334 NUDT16Q96DE0 195 aaKnown RBP22.62■■□□□ 1.21
DDX41-214ENST00000512334 SRPK2P78362 688 aaKnown RBP22.61■■□□□ 1.21
DDX41-214ENST00000512334 ILDR2Q71H61 639 aa22.61■■□□□ 1.21
DDX41-214ENST00000512334 ATP7BP35670 1465 aa22.6■■□□□ 1.21
DDX41-214ENST00000512334 ITSN1Q15811 1721 aa22.6■■□□□ 1.21
DDX41-214ENST00000512334 NGDNQ8NEJ9 315 aaKnown RBP22.59■■□□□ 1.21
DDX41-214ENST00000512334 CABP2Q9NPB3 220 aa22.57■■□□□ 1.2
DDX41-214ENST00000512334 RGS17Q9UGC6 210 aaPredicted RBP22.57■■□□□ 1.2
DDX41-214ENST00000512334 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
DDX41-214ENST00000512334 LMOD2Q6P5Q4 547 aa22.56■■□□□ 1.2
DDX41-214ENST00000512334 TIMELESSQ9UNS1 1208 aa22.56■■□□□ 1.2
DDX41-214ENST00000512334 ADAMTS2O95450 1211 aa22.55■■□□□ 1.2
DDX41-214ENST00000512334 CCDC61Q9Y6R9 512 aa22.55■■□□□ 1.2
DDX41-214ENST00000512334 COL22A1Q8NFW1 1626 aaPredicted RBP22.55■■□□□ 1.2
DDX41-214ENST00000512334 TNS3Q68CZ2 1445 aa22.55■■□□□ 1.2
DDX41-214ENST00000512334 EVC2Q86UK5 1308 aa22.55■■□□□ 1.2
DDX41-214ENST00000512334 SBNO1A3KN83 1393 aa22.53■■□□□ 1.2
DDX41-214ENST00000512334 TOPAZ1Q8N9V7 1692 aa22.53■■□□□ 1.2
DDX41-214ENST00000512334 C8orf37Q96NL8 207 aa22.53■■□□□ 1.2
DDX41-214ENST00000512334 PLEKHG5O94827 1062 aa22.52■■□□□ 1.2
DDX41-214ENST00000512334 PPIP5K1Q6PFW1 1433 aa22.5■■□□□ 1.19
DDX41-214ENST00000512334 PAK3O75914 559 aaPredicted RBP22.5■■□□□ 1.19
DDX41-214ENST00000512334 ACEP12821 1306 aa22.5■■□□□ 1.19
DDX41-214ENST00000512334 HAP1P54257 671 aaPredicted RBP22.49■■□□□ 1.19
DDX41-214ENST00000512334 POTEAQ6S8J7 498 aa22.49■■□□□ 1.19
DDX41-214ENST00000512334 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
DDX41-214ENST00000512334 TRPM3Q9HCF6 1732 aaPredicted RBP22.48■■□□□ 1.19
DDX41-214ENST00000512334 PLEKHG3A1L390 1219 aa22.48■■□□□ 1.19
DDX41-214ENST00000512334 ZNF772Q68DY9 489 aaPredicted RBP22.48■■□□□ 1.19
DDX41-214ENST00000512334 AFF2P51816 1311 aa22.48■■□□□ 1.19
DDX41-214ENST00000512334 NGLY1Q96IV0 654 aa22.47■■□□□ 1.19
DDX41-214ENST00000512334 SBNO2Q9Y2G9 1366 aa22.47■■□□□ 1.19
DDX41-214ENST00000512334 POLR3AO14802 1390 aaPredicted RBP22.46■■□□□ 1.19
DDX41-214ENST00000512334 CABLES1Q8TDN4 633 aa22.45■■□□□ 1.18
DDX41-214ENST00000512334 CABP1Q9NZU7 370 aa22.45■■□□□ 1.18
DDX41-214ENST00000512334 ST20-MTHFSA0A0A6YYL1 179 aa22.44■■□□□ 1.18
DDX41-214ENST00000512334 ALS2Q96Q42 1657 aa22.43■■□□□ 1.18
DDX41-214ENST00000512334 ATAD2Q6PL18 1390 aa22.42■■□□□ 1.18
DDX41-214ENST00000512334 USP47Q96K76 1375 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms