RNA–Protein interactions for RNA: ENST00000512293.1

PDLIM3-207, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 581 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-207ENST00000512293 TECPR2O15040 1411 aa26.29■■□□□ 1.8
PDLIM3-207ENST00000512293 NPHP3Q7Z494 1330 aa26.28■■□□□ 1.8
PDLIM3-207ENST00000512293 IFT172Q9UG01 1749 aa26.26■■□□□ 1.79
PDLIM3-207ENST00000512293 CCDC144AA2RUR9 1427 aa26.26■■□□□ 1.79
PDLIM3-207ENST00000512293 SPATA31E1Q6ZUB1 1445 aa26.26■■□□□ 1.79
PDLIM3-207ENST00000512293 MYOM2P54296 1465 aa26.25■■□□□ 1.79
PDLIM3-207ENST00000512293 ANKRD30BQ9BXX2 1392 aa26.25■■□□□ 1.79
PDLIM3-207ENST00000512293 USP21Q9UK80 565 aa26.25■■□□□ 1.79
PDLIM3-207ENST00000512293 TRPC5Q9UL62 973 aaPredicted RBP26.25■■□□□ 1.79
PDLIM3-207ENST00000512293 PXDNQ92626 1479 aa26.24■■□□□ 1.79
PDLIM3-207ENST00000512293 ADGRF5Q8IZF2 1346 aa26.24■■□□□ 1.79
PDLIM3-207ENST00000512293 KNDC1Q76NI1 1749 aa26.23■■□□□ 1.79
PDLIM3-207ENST00000512293 ATRNO75882 1429 aa26.22■■□□□ 1.79
PDLIM3-207ENST00000512293 LRPPRCP42704 1394 aaKnown RBP26.22■■□□□ 1.79
PDLIM3-207ENST00000512293 ABCC11Q96J66 1382 aa26.22■■□□□ 1.79
PDLIM3-207ENST00000512293 ESCO1Q5FWF5 840 aa26.22■■□□□ 1.79
PDLIM3-207ENST00000512293 MARF1Q9Y4F3 1742 aaKnown RBP26.22■■□□□ 1.79
PDLIM3-207ENST00000512293 ATAD2Q6PL18 1390 aa26.2■■□□□ 1.79
PDLIM3-207ENST00000512293 FOXD1Q16676 465 aa26.2■■□□□ 1.78
PDLIM3-207ENST00000512293 PIK3C2GO75747 1445 aa26.18■■□□□ 1.78
PDLIM3-207ENST00000512293 BCL9LQ86UU0 1499 aa26.17■■□□□ 1.78
PDLIM3-207ENST00000512293 FOXO3O43524 673 aa26.16■■□□□ 1.78
PDLIM3-207ENST00000512293 MPHOSPH9Q99550 1183 aa26.16■■□□□ 1.78
PDLIM3-207ENST00000512293 EP400Q96L91 3159 aa26.16■■□□□ 1.78
PDLIM3-207ENST00000512293 FMN2Q9NZ56 1722 aa26.15■■□□□ 1.78
PDLIM3-207ENST00000512293 RGL3Q3MIN7 710 aa26.15■■□□□ 1.78
PDLIM3-207ENST00000512293 WAPLQ7Z5K2 1190 aa26.15■■□□□ 1.78
PDLIM3-207ENST00000512293 SIRT1Q96EB6 747 aa26.15■■□□□ 1.78
PDLIM3-207ENST00000512293 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.78
PDLIM3-207ENST00000512293 KIF1AQ12756 1690 aa26.14■■□□□ 1.78
PDLIM3-207ENST00000512293 STK26Q9P289 416 aa26.13■■□□□ 1.77
PDLIM3-207ENST00000512293 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.12■■□□□ 1.77
PDLIM3-207ENST00000512293 YTHDC2Q9H6S0 1430 aaKnown RBP26.12■■□□□ 1.77
PDLIM3-207ENST00000512293 SRCAPQ6ZRS2 3230 aa26.12■■□□□ 1.77
PDLIM3-207ENST00000512293 PLEKHH1Q9ULM0 1364 aa26.1■■□□□ 1.77
PDLIM3-207ENST00000512293 TMEM132EQ6IEE7 984 aa26.1■■□□□ 1.77
PDLIM3-207ENST00000512293 XPCQ01831 940 aaPredicted RBP26.08■■□□□ 1.77
PDLIM3-207ENST00000512293 CCDC125Q86Z20 511 aa26.08■■□□□ 1.77
PDLIM3-207ENST00000512293 SPATA31A3Q5VYP0 1347 aa26.08■■□□□ 1.77
PDLIM3-207ENST00000512293 NRXN1Q9ULB1 1477 aa26.07■■□□□ 1.76
PDLIM3-207ENST00000512293 C14orf93Q9H972 538 aaKnown RBP26.07■■□□□ 1.76
PDLIM3-207ENST00000512293 GJD4Q96KN9 370 aaPredicted RBP26.06■■□□□ 1.76
PDLIM3-207ENST00000512293 SLIT2O94813 1529 aa26.05■■□□□ 1.76
PDLIM3-207ENST00000512293 NUTM2FA1L443 756 aa26.05■■□□□ 1.76
PDLIM3-207ENST00000512293 UNC5CLQ8IV45 518 aa26.02■■□□□ 1.76
PDLIM3-207ENST00000512293 USP32Q8NFA0 1604 aa26.02■■□□□ 1.76
PDLIM3-207ENST00000512293 RGPD8O14715 1765 aaPredicted RBP26.01■■□□□ 1.75
PDLIM3-207ENST00000512293 DHX57Q6P158 1386 aaKnown RBP26.01■■□□□ 1.75
PDLIM3-207ENST00000512293 KRT28Q7Z3Y7 464 aa26.01■■□□□ 1.75
PDLIM3-207ENST00000512293 GLI3P10071 1580 aa25.99■■□□□ 1.75
PDLIM3-207ENST00000512293 RALGAPBQ86X10 1494 aa25.98■■□□□ 1.75
PDLIM3-207ENST00000512293 TNS3Q68CZ2 1445 aa25.98■■□□□ 1.75
PDLIM3-207ENST00000512293 PSME1Q06323 249 aa25.98■■□□□ 1.75
PDLIM3-207ENST00000512293 PHF8Q9UPP1 1060 aa25.98■■□□□ 1.75
PDLIM3-207ENST00000512293 SBNO1A3KN83 1393 aa25.97■■□□□ 1.75
PDLIM3-207ENST00000512293 DLC1Q96QB1 1528 aa25.97■■□□□ 1.75
PDLIM3-207ENST00000512293 NWD2Q9ULI1 1742 aa25.95■■□□□ 1.74
PDLIM3-207ENST00000512293 CFAP70Q5T0N1 1121 aa25.95■■□□□ 1.74
PDLIM3-207ENST00000512293 ZRANB1Q9UGI0 708 aa25.95■■□□□ 1.74
PDLIM3-207ENST00000512293 ANKARQ7Z5J8 1434 aa25.93■■□□□ 1.74
PDLIM3-207ENST00000512293 ARHGEF10O15013 1369 aa25.93■■□□□ 1.74
PDLIM3-207ENST00000512293 ADGRB2O60241 1585 aa25.92■■□□□ 1.74
PDLIM3-207ENST00000512293 ABCA3Q99758 1704 aa25.91■■□□□ 1.74
PDLIM3-207ENST00000512293 PRAM1Q96QH2 718 aa25.91■■□□□ 1.74
PDLIM3-207ENST00000512293 BLMP54132 1417 aaPredicted RBP25.9■■□□□ 1.74
PDLIM3-207ENST00000512293 VPS72Q15906 364 aa25.9■■□□□ 1.74
PDLIM3-207ENST00000512293 BRWD3Q6RI45 1802 aa25.9■■□□□ 1.74
PDLIM3-207ENST00000512293 PLCH1Q4KWH8 1693 aa25.9■■□□□ 1.74
PDLIM3-207ENST00000512293 ONECUT3O60422 494 aaPredicted RBP25.89■■□□□ 1.74
PDLIM3-207ENST00000512293 ADGRB1O14514 1584 aa25.88■■□□□ 1.73
PDLIM3-207ENST00000512293 HAP1P54257 671 aaPredicted RBP25.87■■□□□ 1.73
PDLIM3-207ENST00000512293 CABLES1Q8TDN4 633 aa25.85■■□□□ 1.73
PDLIM3-207ENST00000512293 POGKQ9P215 609 aa25.85■■□□□ 1.73
PDLIM3-207ENST00000512293 SEPT12Q8IYM1 358 aa25.84■■□□□ 1.73
PDLIM3-207ENST00000512293 TRPM3Q9HCF6 1732 aaPredicted RBP25.84■■□□□ 1.73
PDLIM3-207ENST00000512293 SAFB2Q14151 953 aaKnown RBP eCLIP25.83■■□□□ 1.73
PDLIM3-207ENST00000512293 EIF3AQ14152 1382 aaKnown RBP25.82■■□□□ 1.72
PDLIM3-207ENST00000512293 STAC3Q96MF2 364 aa25.82■■□□□ 1.72
PDLIM3-207ENST00000512293 RAB3GAP2Q9H2M9 1393 aa25.82■■□□□ 1.72
PDLIM3-207ENST00000512293 ALS2Q96Q42 1657 aa25.8■■□□□ 1.72
PDLIM3-207ENST00000512293 FAM83GA6ND36 823 aa25.8■■□□□ 1.72
PDLIM3-207ENST00000512293 LMOD2Q6P5Q4 547 aa25.79■■□□□ 1.72
PDLIM3-207ENST00000512293 PMFBP1Q8TBY8 1022 aa25.79■■□□□ 1.72
PDLIM3-207ENST00000512293 NRAPQ86VF7 1730 aa25.79■■□□□ 1.72
PDLIM3-207ENST00000512293 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
PDLIM3-207ENST00000512293 GPRASP1Q5JY77 1395 aa25.77■■□□□ 1.72
PDLIM3-207ENST00000512293 SF3B2Q13435 895 aaKnown RBP25.76■■□□□ 1.71
PDLIM3-207ENST00000512293 KRT27Q7Z3Y8 459 aa25.76■■□□□ 1.71
PDLIM3-207ENST00000512293 TRAK1Q9UPV9 953 aa25.76■■□□□ 1.71
PDLIM3-207ENST00000512293 COL14A1Q05707 1796 aaKnown RBP25.76■■□□□ 1.71
PDLIM3-207ENST00000512293 CCDC9Q9Y3X0 531 aaKnown RBP25.75■■□□□ 1.71
PDLIM3-207ENST00000512293 PRR36Q9H6K5 1346 aa25.74■■□□□ 1.71
PDLIM3-207ENST00000512293 WASLO00401 505 aaPredicted RBP25.73■■□□□ 1.71
PDLIM3-207ENST00000512293 CRYBG1Q9Y4K1 1723 aa25.72■■□□□ 1.71
PDLIM3-207ENST00000512293 DEFB132Q7Z7B7 95 aa25.72■■□□□ 1.71
PDLIM3-207ENST00000512293 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
PDLIM3-207ENST00000512293 MINK1Q8N4C8 1332 aaPredicted RBP25.71■■□□□ 1.71
PDLIM3-207ENST00000512293 PLEKHG5O94827 1062 aa25.7■■□□□ 1.7
PDLIM3-207ENST00000512293 HRCP23327 699 aa25.7■■□□□ 1.7
PDLIM3-207ENST00000512293 DCAF11Q8TEB1 546 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms