RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 APBB1IPQ7Z5R6 666 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC11-208ENST00000511955 IPO4Q8TEX9 1081 aaKnown RBP6.71□□□□□ -1.34
TRAPPC11-208ENST00000511955 RRP7BPQ9NSQ0 103 aa6.71□□□□□ -1.34
TRAPPC11-208ENST00000511955 SUGT1Q9Y2Z0 365 aa6.71□□□□□ -1.34
TRAPPC11-208ENST00000511955 MBD5Q9P267 1494 aa6.7□□□□□ -1.34
TRAPPC11-208ENST00000511955 MIA2Q96PC5 1412 aa6.7□□□□□ -1.34
TRAPPC11-208ENST00000511955 ZC3H4Q9UPT8 1303 aaKnown RBP6.7□□□□□ -1.34
TRAPPC11-208ENST00000511955 ERICH6BQ5W0A0 696 aa6.7□□□□□ -1.34
TRAPPC11-208ENST00000511955 AK7Q96M32 723 aa6.7□□□□□ -1.34
TRAPPC11-208ENST00000511955 SLC52A1Q9NWF4 448 aa6.7□□□□□ -1.34
TRAPPC11-208ENST00000511955 ZFYVE16Q7Z3T8 1539 aa6.7□□□□□ -1.34
TRAPPC11-208ENST00000511955 PLEKHH2Q8IVE3 1493 aa6.7□□□□□ -1.34
TRAPPC11-208ENST00000511955 CCDC141Q6ZP82 1450 aa6.69□□□□□ -1.34
TRAPPC11-208ENST00000511955 KIAA1107Q9UPP5 1409 aa6.69□□□□□ -1.34
TRAPPC11-208ENST00000511955 PROSER2Q86WR7 435 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-208ENST00000511955 DRC1Q96MC2 740 aa6.69□□□□□ -1.34
TRAPPC11-208ENST00000511955 HECW2Q9P2P5 1572 aa6.69□□□□□ -1.34
TRAPPC11-208ENST00000511955 RIOK3O14730 519 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-208ENST00000511955 GGT6Q6P531 493 aa6.68□□□□□ -1.34
TRAPPC11-208ENST00000511955 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
TRAPPC11-208ENST00000511955 ABCC5O15440 1437 aa6.68□□□□□ -1.34
TRAPPC11-208ENST00000511955 C9orf84Q5VXU9 1444 aa6.68□□□□□ -1.34
TRAPPC11-208ENST00000511955 KDM5CP41229 1560 aa6.68□□□□□ -1.34
TRAPPC11-208ENST00000511955 ATP7AQ04656 1500 aa6.68□□□□□ -1.34
TRAPPC11-208ENST00000511955 FTSJ3Q8IY81 847 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 RNF25Q96BH1 459 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 TERF2IPQ9NYB0 399 aa6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 DAPK1P53355 1430 aa6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 ARHGEF40Q8TER5 1519 aa6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 ABCA6Q8N139 1617 aa6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 PATL2C9JE40 543 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 KIF3BO15066 747 aa6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 PEX14O75381 377 aa6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 RBM26Q5T8P6 1007 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 KIAA1522Q9P206 1035 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 ZMYM4Q5VZL5 1548 aa6.67□□□□□ -1.34
TRAPPC11-208ENST00000511955 KIDINS220Q9ULH0 1771 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 MLH3Q9UHC1 1453 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 KDM4FA0A1W2PPD8 638 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 RAB11FIP3O75154 756 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 FAM193AP78312 1265 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 ATP10AO60312 1499 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 SIGLEC1Q9BZZ2 1709 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 DIP2CQ9Y2E4 1556 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 PTPRKQ15262 1439 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 PDE4DQ08499 809 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 RALBP1Q15311 655 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 SREK1Q8WXA9 508 aaKnown RBP6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 MRRFQ96E11 262 aaKnown RBP6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 KIF15Q9NS87 1388 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 TCOF1Q13428 1488 aaKnown RBP6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 MAGI2Q86UL8 1455 aa6.66□□□□□ -1.34
TRAPPC11-208ENST00000511955 SPDYE2BA6NHP3 402 aa6.65□□□□□ -1.34
TRAPPC11-208ENST00000511955 SPDYE6P0CI01 402 aa6.65□□□□□ -1.34
TRAPPC11-208ENST00000511955 SPDYE2Q495Y8 402 aa6.65□□□□□ -1.34
TRAPPC11-208ENST00000511955 POM121Q96HA1 1249 aa6.65□□□□□ -1.34
TRAPPC11-208ENST00000511955 CHMP4BQ9H444 224 aaKnown RBP6.65□□□□□ -1.34
TRAPPC11-208ENST00000511955 ESF1Q9H501 851 aaKnown RBP6.65□□□□□ -1.34
TRAPPC11-208ENST00000511955 TESPA1A2RU30 521 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC11-208ENST00000511955 CEBPAP49715 358 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC11-208ENST00000511955 A2MP01023 1474 aa6.65□□□□□ -1.35
TRAPPC11-208ENST00000511955 ARHGEF5Q12774 1597 aa6.65□□□□□ -1.35
TRAPPC11-208ENST00000511955 INO80Q9ULG1 1556 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC11-208ENST00000511955 DNMT1P26358 1616 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-208ENST00000511955 PLEKHG3A1L390 1219 aa6.64□□□□□ -1.35
TRAPPC11-208ENST00000511955 KRI1Q8N9T8 703 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-208ENST00000511955 ANKRD30AQ9BXX3 1397 aa6.64□□□□□ -1.35
TRAPPC11-208ENST00000511955 KCNA1Q09470 495 aa6.64□□□□□ -1.35
TRAPPC11-208ENST00000511955 GIMAP6Q6P9H5 292 aa6.64□□□□□ -1.35
TRAPPC11-208ENST00000511955 CADPS2Q86UW7 1296 aa6.64□□□□□ -1.35
TRAPPC11-208ENST00000511955 IVNS1ABPQ9Y6Y0 642 aa6.64□□□□□ -1.35
TRAPPC11-208ENST00000511955 RRBP1Q9P2E9 1410 aaKnown RBP6.63□□□□□ -1.35
TRAPPC11-208ENST00000511955 MCM6Q14566 821 aa6.63□□□□□ -1.35
TRAPPC11-208ENST00000511955 CARNS1A5YM72 827 aa6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 SND1Q7KZF4 910 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 NME8Q8N427 588 aa6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 RTEL1-TNFRSF6BF6WH68 1400 aa6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 DHX29Q7Z478 1369 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 NCOA1Q15788 1441 aa6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 EVI5LQ96CN4 794 aa6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 SSUH2Q9Y2M2 353 aa6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 WASHC2CQ9Y4E1 1318 aa6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 CROCC2H7BZ55 1655 aa6.62□□□□□ -1.35
TRAPPC11-208ENST00000511955 TRIM66O15016 1216 aa6.61□□□□□ -1.35
TRAPPC11-208ENST00000511955 FNBP4Q8N3X1 1017 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC11-208ENST00000511955 ADGBQ8N7X0 1667 aa6.61□□□□□ -1.35
TRAPPC11-208ENST00000511955 MADDQ8WXG6 1647 aa6.61□□□□□ -1.35
TRAPPC11-208ENST00000511955 MAP4K4O95819 1239 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC11-208ENST00000511955 SHANK2Q9UPX8 1470 aa6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 TSR1Q2NL82 804 aaKnown RBP6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 KLHL42Q9P2K6 505 aa6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 ANKRD50Q9ULJ7 1429 aa6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 RBM47A0AV96 593 aaKnown RBP6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 FOXD4Q12950 439 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 MORC4Q8TE76 937 aa6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 TRIM52Q96A61 297 aa6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 STK24Q9Y6E0 443 aa6.6□□□□□ -1.35
TRAPPC11-208ENST00000511955 BCORL1Q5H9F3 1711 aa6.59□□□□□ -1.35
TRAPPC11-208ENST00000511955 MAST1Q9Y2H9 1570 aa6.59□□□□□ -1.35
TRAPPC11-208ENST00000511955 STK25O00506 426 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms