RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 DHX29Q7Z478 1369 aaKnown RBP10.67□□□□□ -0.7
COPS4-209ENST00000511653 TMC2Q8TDI7 906 aa10.67□□□□□ -0.7
COPS4-209ENST00000511653 ZC3H15Q8WU90 426 aaKnown RBP10.67□□□□□ -0.7
COPS4-209ENST00000511653 PLPP6Q8IY26 295 aa10.66□□□□□ -0.7
COPS4-209ENST00000511653 ARHGEF5Q12774 1597 aa10.66□□□□□ -0.7
COPS4-209ENST00000511653 PZPP20742 1482 aa10.66□□□□□ -0.7
COPS4-209ENST00000511653 FAM135AQ9P2D6 1515 aa10.65□□□□□ -0.7
COPS4-209ENST00000511653 FBXO31Q5XUX0 539 aaPredicted RBP10.65□□□□□ -0.7
COPS4-209ENST00000511653 TNRQ92752 1358 aa10.64□□□□□ -0.71
COPS4-209ENST00000511653 CFAP65Q6ZU64 1925 aaKnown RBP10.64□□□□□ -0.71
COPS4-209ENST00000511653 RNF17Q9BXT8 1623 aaKnown RBP10.64□□□□□ -0.71
COPS4-209ENST00000511653 UBAP1LF5GYI3 381 aa10.64□□□□□ -0.71
COPS4-209ENST00000511653 SOCS7O14512 581 aa10.63□□□□□ -0.71
COPS4-209ENST00000511653 KIF3BO15066 747 aa10.63□□□□□ -0.71
COPS4-209ENST00000511653 SEC24BO95487 1268 aa10.63□□□□□ -0.71
COPS4-209ENST00000511653 VWDEQ8N2E2 1590 aa10.63□□□□□ -0.71
COPS4-209ENST00000511653 CEP152O94986 1710 aa10.63□□□□□ -0.71
COPS4-209ENST00000511653 MROH1Q8NDA8 1641 aa10.63□□□□□ -0.71
COPS4-209ENST00000511653 RBM26Q5T8P6 1007 aaKnown RBP10.62□□□□□ -0.71
COPS4-209ENST00000511653 STRCP1A6NGW2 1772 aa10.62□□□□□ -0.71
COPS4-209ENST00000511653 MAST1Q9Y2H9 1570 aa10.62□□□□□ -0.71
COPS4-209ENST00000511653 ABCC3O15438 1527 aa10.62□□□□□ -0.71
COPS4-209ENST00000511653 ZC3H13Q5T200 1668 aaKnown RBP10.61□□□□□ -0.71
COPS4-209ENST00000511653 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
COPS4-209ENST00000511653 DEPDC5O75140 1603 aa10.61□□□□□ -0.71
COPS4-209ENST00000511653 ALKQ9UM73 1620 aa10.61□□□□□ -0.71
COPS4-209ENST00000511653 LRRC9Q6ZRR7 1453 aa10.61□□□□□ -0.71
COPS4-209ENST00000511653 UGGT1Q9NYU2 1555 aa10.6□□□□□ -0.71
COPS4-209ENST00000511653 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
COPS4-209ENST00000511653 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
COPS4-209ENST00000511653 IQGAP1P46940 1657 aa10.6□□□□□ -0.71
COPS4-209ENST00000511653 CPS1P31327 1500 aa10.6□□□□□ -0.71
COPS4-209ENST00000511653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.6□□□□□ -0.71
COPS4-209ENST00000511653 EIF2AK4Q9P2K8 1649 aaKnown RBP10.6□□□□□ -0.71
COPS4-209ENST00000511653 SHANK2Q9UPX8 1470 aa10.6□□□□□ -0.71
COPS4-209ENST00000511653 G3V3G9 751 aa10.6□□□□□ -0.71
COPS4-209ENST00000511653 NLRP1Q9C000 1473 aa10.59□□□□□ -0.71
COPS4-209ENST00000511653 WASHC2CQ9Y4E1 1318 aa10.59□□□□□ -0.71
COPS4-209ENST00000511653 VPS8Q8N3P4 1428 aa10.59□□□□□ -0.71
COPS4-209ENST00000511653 MIA2Q96PC5 1412 aa10.59□□□□□ -0.71
COPS4-209ENST00000511653 PDIA6Q15084 440 aa10.59□□□□□ -0.71
COPS4-209ENST00000511653 UBR1Q8IWV7 1749 aa10.58□□□□□ -0.72
COPS4-209ENST00000511653 MED14O60244 1454 aa10.58□□□□□ -0.72
COPS4-209ENST00000511653 MED1Q15648 1581 aaPredicted RBP10.58□□□□□ -0.72
COPS4-209ENST00000511653 CROCC2H7BZ55 1655 aa10.57□□□□□ -0.72
COPS4-209ENST00000511653 ERVK-7P63135 1459 aa10.57□□□□□ -0.72
COPS4-209ENST00000511653 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
COPS4-209ENST00000511653 C7P10643 843 aa10.57□□□□□ -0.72
COPS4-209ENST00000511653 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
COPS4-209ENST00000511653 SP7Q8TDD2 431 aaPredicted RBP10.57□□□□□ -0.72
COPS4-209ENST00000511653 SLC24A3Q9HC58 644 aa10.57□□□□□ -0.72
COPS4-209ENST00000511653 NPHP4O75161 1426 aaPredicted RBP10.56□□□□□ -0.72
COPS4-209ENST00000511653 HSPA1LP34931 641 aa10.56□□□□□ -0.72
COPS4-209ENST00000511653 RSPH4AQ5TD94 716 aa10.56□□□□□ -0.72
COPS4-209ENST00000511653 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
COPS4-209ENST00000511653 KANK4Q5T7N3 995 aaPredicted RBP10.55□□□□□ -0.72
COPS4-209ENST00000511653 XIRP1Q702N8 1843 aaKnown RBP10.55□□□□□ -0.72
COPS4-209ENST00000511653 SYNMO15061 1565 aa10.54□□□□□ -0.72
COPS4-209ENST00000511653 MYOM3Q5VTT5 1437 aa10.54□□□□□ -0.72
COPS4-209ENST00000511653 TSPY4P0CV99 314 aa10.54□□□□□ -0.72
COPS4-209ENST00000511653 TSPY10P0CW01 314 aa10.54□□□□□ -0.72
COPS4-209ENST00000511653 ANKLE2Q86XL3 938 aa10.54□□□□□ -0.72
COPS4-209ENST00000511653 ZMYND10O75800 440 aa10.53□□□□□ -0.72
COPS4-209ENST00000511653 THEMISQ8N1K5 641 aaPredicted RBP10.53□□□□□ -0.72
COPS4-209ENST00000511653 PRDM15P57071 1507 aaPredicted RBP10.53□□□□□ -0.72
COPS4-209ENST00000511653 MAP3K1Q13233 1512 aa10.53□□□□□ -0.72
COPS4-209ENST00000511653 DUOX2Q9NRD8 1548 aa10.53□□□□□ -0.72
COPS4-209ENST00000511653 LOC105371045A0A1W2PR82 267 aa10.53□□□□□ -0.72
COPS4-209ENST00000511653 SMYD5Q6GMV2 418 aa10.53□□□□□ -0.72
COPS4-209ENST00000511653 LRRC7Q96NW7 1537 aa10.53□□□□□ -0.72
COPS4-209ENST00000511653 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
COPS4-209ENST00000511653 PTPN23Q9H3S7 1636 aa10.52□□□□□ -0.73
COPS4-209ENST00000511653 SPDYE16A6NNV3 312 aaPredicted RBP10.51□□□□□ -0.73
COPS4-209ENST00000511653 TOM1O60784 492 aa10.51□□□□□ -0.73
COPS4-209ENST00000511653 PIK3C2BO00750 1634 aa10.51□□□□□ -0.73
COPS4-209ENST00000511653 MAP3K9P80192 1104 aa10.5□□□□□ -0.73
COPS4-209ENST00000511653 KIF15Q9NS87 1388 aa10.5□□□□□ -0.73
COPS4-209ENST00000511653 SCAF11Q99590 1463 aaKnown RBP10.49□□□□□ -0.73
COPS4-209ENST00000511653 ARHGAP23Q9P227 1491 aa10.49□□□□□ -0.73
COPS4-209ENST00000511653 SLIT1O75093 1534 aa10.49□□□□□ -0.73
COPS4-209ENST00000511653 BRPF1P55201 1214 aaPredicted RBP10.49□□□□□ -0.73
COPS4-209ENST00000511653 ABCC5O15440 1437 aa10.49□□□□□ -0.73
COPS4-209ENST00000511653 GRXCR2A6NFK2 248 aa10.48□□□□□ -0.73
COPS4-209ENST00000511653 PRIM1P49642 420 aaKnown RBP10.48□□□□□ -0.73
COPS4-209ENST00000511653 ERBINQ96RT1 1412 aa10.48□□□□□ -0.73
COPS4-209ENST00000511653 ARHGAP31Q2M1Z3 1444 aa10.47□□□□□ -0.73
COPS4-209ENST00000511653 GPR37O15354 613 aa10.47□□□□□ -0.73
COPS4-209ENST00000511653 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
COPS4-209ENST00000511653 BARGINQ6ZT62 677 aa10.47□□□□□ -0.73
COPS4-209ENST00000511653 GPIHBP1Q8IV16 184 aa10.47□□□□□ -0.73
COPS4-209ENST00000511653 LTKP29376 864 aa10.47□□□□□ -0.73
COPS4-209ENST00000511653 DAPK1P53355 1430 aa10.46□□□□□ -0.73
COPS4-209ENST00000511653 C3orf67Q6ZVT6 689 aa10.46□□□□□ -0.74
COPS4-209ENST00000511653 KDM5AP29375 1690 aaKnown RBP10.46□□□□□ -0.74
COPS4-209ENST00000511653 MYO5BQ9ULV0 1848 aa10.45□□□□□ -0.74
COPS4-209ENST00000511653 OSBPP22059 807 aa10.44□□□□□ -0.74
COPS4-209ENST00000511653 DDX12PQ92771 950 aa10.44□□□□□ -0.74
COPS4-209ENST00000511653 RRP7BPQ9NSQ0 103 aa10.44□□□□□ -0.74
COPS4-209ENST00000511653 FGD6Q6ZV73 1430 aa10.44□□□□□ -0.74
COPS4-209ENST00000511653 EFCAB6Q5THR3 1501 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms