RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 CFAP70Q5T0N1 1121 aa17.82■□□□□ 0.44
CLDND1-223ENST00000511081 STK26Q9P289 416 aa17.82■□□□□ 0.44
CLDND1-223ENST00000511081 YTHDC2Q9H6S0 1430 aaKnown RBP17.81■□□□□ 0.44
CLDND1-223ENST00000511081 NHSL1Q5SYE7 1610 aa17.81■□□□□ 0.44
CLDND1-223ENST00000511081 WAPLQ7Z5K2 1190 aa17.81■□□□□ 0.44
CLDND1-223ENST00000511081 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
CLDND1-223ENST00000511081 LRRC59Q96AG4 307 aaKnown RBP17.8■□□□□ 0.44
CLDND1-223ENST00000511081 LAMC1P11047 1609 aa17.8■□□□□ 0.44
CLDND1-223ENST00000511081 ORAI2Q96SN7 254 aa17.79■□□□□ 0.44
CLDND1-223ENST00000511081 SHPRHQ149N8 1683 aa17.79■□□□□ 0.44
CLDND1-223ENST00000511081 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
CLDND1-223ENST00000511081 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
CLDND1-223ENST00000511081 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
CLDND1-223ENST00000511081 DDX17Q92841 729 aaKnown RBP17.77■□□□□ 0.44
CLDND1-223ENST00000511081 CDC42BPGQ6DT37 1551 aa17.77■□□□□ 0.44
CLDND1-223ENST00000511081 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.43
CLDND1-223ENST00000511081 SOS2Q07890 1332 aaPredicted RBP17.76■□□□□ 0.43
CLDND1-223ENST00000511081 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
CLDND1-223ENST00000511081 POTEAQ6S8J7 498 aa17.75■□□□□ 0.43
CLDND1-223ENST00000511081 LRP6O75581 1613 aa17.74■□□□□ 0.43
CLDND1-223ENST00000511081 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
CLDND1-223ENST00000511081 ADGRB1O14514 1584 aa17.74■□□□□ 0.43
CLDND1-223ENST00000511081 DLC1Q96QB1 1528 aa17.72■□□□□ 0.43
CLDND1-223ENST00000511081 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
CLDND1-223ENST00000511081 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
CLDND1-223ENST00000511081 PRAM1Q96QH2 718 aa17.7■□□□□ 0.42
CLDND1-223ENST00000511081 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
CLDND1-223ENST00000511081 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
CLDND1-223ENST00000511081 NPHP3Q7Z494 1330 aa17.69■□□□□ 0.42
CLDND1-223ENST00000511081 FOXO3O43524 673 aa17.67■□□□□ 0.42
CLDND1-223ENST00000511081 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
CLDND1-223ENST00000511081 PXDNQ92626 1479 aa17.65■□□□□ 0.42
CLDND1-223ENST00000511081 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
CLDND1-223ENST00000511081 NUTM2BA6NNL0 878 aaPredicted RBP17.65■□□□□ 0.42
CLDND1-223ENST00000511081 NUTM2EB1AL46 878 aaPredicted RBP17.65■□□□□ 0.42
CLDND1-223ENST00000511081 MEX3CQ5U5Q3 659 aaKnown RBP17.65■□□□□ 0.42
CLDND1-223ENST00000511081 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
CLDND1-223ENST00000511081 NUTM2AQ8IVF1 878 aaPredicted RBP17.65■□□□□ 0.42
CLDND1-223ENST00000511081 POGKQ9P215 609 aa17.65■□□□□ 0.42
CLDND1-223ENST00000511081 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLDND1-223ENST00000511081 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
CLDND1-223ENST00000511081 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
CLDND1-223ENST00000511081 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
CLDND1-223ENST00000511081 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
CLDND1-223ENST00000511081 PHF8Q9UPP1 1060 aa17.61■□□□□ 0.41
CLDND1-223ENST00000511081 ANKARQ7Z5J8 1434 aa17.6■□□□□ 0.41
CLDND1-223ENST00000511081 KIF1AQ12756 1690 aa17.6■□□□□ 0.41
CLDND1-223ENST00000511081 AFF2P51816 1311 aa17.59■□□□□ 0.41
CLDND1-223ENST00000511081 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
CLDND1-223ENST00000511081 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
CLDND1-223ENST00000511081 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.4
CLDND1-223ENST00000511081 XPCQ01831 940 aaPredicted RBP17.58■□□□□ 0.4
CLDND1-223ENST00000511081 NBPF1Q3BBV0 1214 aa17.58■□□□□ 0.4
CLDND1-223ENST00000511081 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.4
CLDND1-223ENST00000511081 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
CLDND1-223ENST00000511081 USP32Q8NFA0 1604 aa17.58■□□□□ 0.4
CLDND1-223ENST00000511081 MINK1Q8N4C8 1332 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-223ENST00000511081 FNBP4Q8N3X1 1017 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-223ENST00000511081 C8orf37Q96NL8 207 aa17.56■□□□□ 0.4
CLDND1-223ENST00000511081 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
CLDND1-223ENST00000511081 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
CLDND1-223ENST00000511081 PRR36Q9H6K5 1346 aa17.55■□□□□ 0.4
CLDND1-223ENST00000511081 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
CLDND1-223ENST00000511081 PSME1Q06323 249 aa17.55■□□□□ 0.4
CLDND1-223ENST00000511081 NGLY1Q96IV0 654 aa17.55■□□□□ 0.4
CLDND1-223ENST00000511081 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
CLDND1-223ENST00000511081 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
CLDND1-223ENST00000511081 RXRBP28702 533 aa17.54■□□□□ 0.4
CLDND1-223ENST00000511081 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
CLDND1-223ENST00000511081 TRIM26Q12899 539 aaPredicted RBP17.53■□□□□ 0.4
CLDND1-223ENST00000511081 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
CLDND1-223ENST00000511081 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.4
CLDND1-223ENST00000511081 CDK12Q9NYV4 1490 aaPredicted RBP17.52■□□□□ 0.4
CLDND1-223ENST00000511081 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
CLDND1-223ENST00000511081 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
CLDND1-223ENST00000511081 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
CLDND1-223ENST00000511081 TNS3Q68CZ2 1445 aa17.49■□□□□ 0.39
CLDND1-223ENST00000511081 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
CLDND1-223ENST00000511081 NUDT16Q96DE0 195 aaKnown RBP17.49■□□□□ 0.39
CLDND1-223ENST00000511081 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
CLDND1-223ENST00000511081 USP21Q9UK80 565 aa17.49■□□□□ 0.39
CLDND1-223ENST00000511081 MARF1Q9Y4F3 1742 aaKnown RBP17.49■□□□□ 0.39
CLDND1-223ENST00000511081 ARHGEF10O15013 1369 aa17.47■□□□□ 0.39
CLDND1-223ENST00000511081 ATP7BP35670 1465 aa17.47■□□□□ 0.39
CLDND1-223ENST00000511081 BCL9LQ86UU0 1499 aa17.47■□□□□ 0.39
CLDND1-223ENST00000511081 PLEKHG3A1L390 1219 aa17.46■□□□□ 0.39
CLDND1-223ENST00000511081 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-223ENST00000511081 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
CLDND1-223ENST00000511081 TRPM3Q9HCF6 1732 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-223ENST00000511081 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
CLDND1-223ENST00000511081 ATRNO75882 1429 aa17.45■□□□□ 0.38
CLDND1-223ENST00000511081 CENPJQ9HC77 1338 aaPredicted RBP17.45■□□□□ 0.38
CLDND1-223ENST00000511081 TRPM1Q7Z4N2 1603 aa17.44■□□□□ 0.38
CLDND1-223ENST00000511081 NGDNQ8NEJ9 315 aaKnown RBP17.44■□□□□ 0.38
CLDND1-223ENST00000511081 CABLES1Q8TDN4 633 aa17.44■□□□□ 0.38
CLDND1-223ENST00000511081 SLIT2O94813 1529 aa17.43■□□□□ 0.38
CLDND1-223ENST00000511081 ALS2Q96Q42 1657 aa17.43■□□□□ 0.38
CLDND1-223ENST00000511081 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
CLDND1-223ENST00000511081 POLR3AO14802 1390 aaPredicted RBP17.42■□□□□ 0.38
CLDND1-223ENST00000511081 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms